Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MIR517C-201ENST00000385103 95 ntBASIC1.53□□□□□ -2.16
TRIM38O00635 SNORA67.6-201ENST00000391093 99 ntBASIC1.53□□□□□ -2.16
TRIM38O00635 MIR1323-201ENST00000408090 73 ntBASIC1.53□□□□□ -2.16
TRIM38O00635 SNORD111.1-201ENST00000516421 86 ntBASIC1.53□□□□□ -2.16
TRIM38O00635 RNU7-35P-201ENST00000517174 62 ntBASIC1.53□□□□□ -2.16
TRIM38O00635 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.53□□□□□ -2.16
TRIM38O00635 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.53□□□□□ -2.16
TRIM38O00635 MIR8065-201ENST00000620577 100 ntBASIC1.53□□□□□ -2.16
TRIM38O00635 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TRIM38O00635 RNU6-1244P-201ENST00000363614 108 ntBASIC1.52□□□□□ -2.17
TRIM38O00635 SNORA25.9-201ENST00000365087 128 ntBASIC1.52□□□□□ -2.17
TRIM38O00635 RNU6-652P-201ENST00000365488 107 ntBASIC1.52□□□□□ -2.17
TRIM38O00635 Y_RNA.426-201ENST00000384068 113 ntBASIC1.52□□□□□ -2.17
TRIM38O00635 RNU6-24P-201ENST00000384440 107 ntBASIC1.52□□□□□ -2.17
TRIM38O00635 MIR320A-201ENST00000385302 82 ntBASIC1.52□□□□□ -2.17
TRIM38O00635 RNA5SP261-201ENST00000410536 106 ntBASIC1.52□□□□□ -2.17
TRIM38O00635 Y_RNA.609-201ENST00000410669 89 ntBASIC1.52□□□□□ -2.17
TRIM38O00635 AC245047.7-201ENST00000440265 293 ntBASIC1.52□□□□□ -2.17
TRIM38O00635 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.52□□□□□ -2.17
TRIM38O00635 SNORD67.1-201ENST00000516618 108 ntBASIC1.52□□□□□ -2.17
TRIM38O00635 SNORA74.3-201ENST00000517108 154 ntBASIC1.52□□□□□ -2.17
TRIM38O00635 RNU6-165P-201ENST00000517170 99 ntBASIC1.52□□□□□ -2.17
TRIM38O00635 AP000648.3-201ENST00000623539 4507 ntBASIC1.51□□□□□ -2.17
TRIM38O00635 RNU6-633P-201ENST00000362612 103 ntBASIC1.51□□□□□ -2.17
TRIM38O00635 SNORD38.1-201ENST00000363863 68 ntBASIC1.51□□□□□ -2.17
TRIM38O00635 SNORD26-201ENST00000384147 75 ntBASIC1.51□□□□□ -2.17
TRIM38O00635 Y_RNA.448-201ENST00000384185 108 ntBASIC1.51□□□□□ -2.17
TRIM38O00635 Y_RNA.537-201ENST00000384626 109 ntBASIC1.51□□□□□ -2.17
TRIM38O00635 RNU6-613P-201ENST00000410412 108 ntBASIC1.51□□□□□ -2.17
TRIM38O00635 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.51□□□□□ -2.17
TRIM38O00635 RNU7-43P-201ENST00000516554 64 ntBASIC1.51□□□□□ -2.17
TRIM38O00635 CYP3A52P-201ENST00000563326 91 ntBASIC1.51□□□□□ -2.17
TRIM38O00635 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.51□□□□□ -2.17
TRIM38O00635 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.51□□□□□ -2.17
TRIM38O00635 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TRIM38O00635 Y_RNA.94-201ENST00000363068 106 ntBASIC1.5□□□□□ -2.17
TRIM38O00635 RNU6-1321P-201ENST00000390905 107 ntBASIC1.5□□□□□ -2.17
TRIM38O00635 RNU6-602P-201ENST00000411155 105 ntBASIC1.5□□□□□ -2.17
TRIM38O00635 RNU1-98P-201ENST00000458992 160 ntBASIC1.5□□□□□ -2.17
TRIM38O00635 AC023790.1-201ENST00000482174 347 ntBASIC1.5□□□□□ -2.17
TRIM38O00635 AC105081.1-201ENST00000617727 106 ntBASIC1.5□□□□□ -2.17
TRIM38O00635 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.5□□□□□ -2.17
TRIM38O00635 Z97988.1-201ENST00000637697 135 ntBASIC1.5□□□□□ -2.17
TRIM38O00635 SNORA7.1-201ENST00000363750 139 ntBASIC1.49□□□□□ -2.17
TRIM38O00635 RNU6-392P-201ENST00000364926 101 ntBASIC1.49□□□□□ -2.17
TRIM38O00635 Y_RNA.316-201ENST00000365118 111 ntBASIC1.49□□□□□ -2.17
TRIM38O00635 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.49□□□□□ -2.17
TRIM38O00635 RPS29P28-201ENST00000446439 141 ntBASIC1.49□□□□□ -2.17
TRIM38O00635 snoU13.16-201ENST00000459350 104 ntBASIC1.49□□□□□ -2.17
TRIM38O00635 RNU7-137P-201ENST00000516788 62 ntBASIC1.49□□□□□ -2.17
TRIM38O00635 AC019288.1-201ENST00000557918 224 ntBASIC1.49□□□□□ -2.17
TRIM38O00635 ZNF209P-201ENST00000593450 2304 ntBASIC1.49□□□□□ -2.17
TRIM38O00635 RNU6-524P-201ENST00000384270 107 ntBASIC1.48□□□□□ -2.17
TRIM38O00635 Y_RNA.567-201ENST00000384736 106 ntBASIC1.48□□□□□ -2.17
TRIM38O00635 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.48□□□□□ -2.17
TRIM38O00635 MIR548G-201ENST00000408442 89 ntBASIC1.48□□□□□ -2.17
TRIM38O00635 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.48□□□□□ -2.17
TRIM38O00635 Y_RNA.607-201ENST00000410597 98 ntBASIC1.48□□□□□ -2.17
TRIM38O00635 RNU6-1086P-201ENST00000410930 100 ntBASIC1.48□□□□□ -2.17
TRIM38O00635 RPS29P23-201ENST00000458635 123 ntBASIC1.48□□□□□ -2.17
TRIM38O00635 RNU7-79P-201ENST00000516082 62 ntBASIC1.48□□□□□ -2.17
TRIM38O00635 RNU1-92P-201ENST00000517017 135 ntBASIC1.48□□□□□ -2.17
TRIM38O00635 SNORA31.24-201ENST00000517232 57 ntBASIC1.48□□□□□ -2.17
TRIM38O00635 MIR4421-201ENST00000578133 69 ntBASIC1.48□□□□□ -2.17
TRIM38O00635 Y_RNA.173-201ENST00000363776 113 ntBASIC1.47□□□□□ -2.17
TRIM38O00635 RNU6-776P-201ENST00000364403 104 ntBASIC1.47□□□□□ -2.17
TRIM38O00635 RNU6-1022P-201ENST00000365049 104 ntBASIC1.47□□□□□ -2.17
TRIM38O00635 MIR889-201ENST00000401280 79 ntBASIC1.47□□□□□ -2.17
TRIM38O00635 RNU6-1054P-201ENST00000411293 104 ntBASIC1.47□□□□□ -2.17
TRIM38O00635 AL513043.2-201ENST00000573941 143 ntBASIC1.47□□□□□ -2.17
TRIM38O00635 MIR548AO-201ENST00000579992 96 ntBASIC1.47□□□□□ -2.17
TRIM38O00635 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.47□□□□□ -2.17
TRIM38O00635 AC008133.2-201ENST00000624540 351 ntBASIC1.47□□□□□ -2.17
TRIM38O00635 RNU6-865P-201ENST00000364772 107 ntBASIC1.46□□□□□ -2.18
TRIM38O00635 Y_RNA.355-201ENST00000365462 98 ntBASIC1.46□□□□□ -2.18
TRIM38O00635 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.46□□□□□ -2.18
TRIM38O00635 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.46□□□□□ -2.18
TRIM38O00635 MIR4764-201ENST00000580680 88 ntBASIC1.46□□□□□ -2.18
TRIM38O00635 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.46□□□□□ -2.18
TRIM38O00635 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TRIM38O00635 SNORD114-10-201ENST00000363409 72 ntBASIC1.45□□□□□ -2.18
TRIM38O00635 RNA5SP48-201ENST00000363969 126 ntBASIC1.45□□□□□ -2.18
TRIM38O00635 RNY1P13-201ENST00000365030 105 ntBASIC1.45□□□□□ -2.18
TRIM38O00635 Y_RNA.508-201ENST00000384502 114 ntBASIC1.45□□□□□ -2.18
TRIM38O00635 SNORA2B-201ENST00000384583 137 ntBASIC1.45□□□□□ -2.18
TRIM38O00635 RNU6-1237P-201ENST00000384777 107 ntBASIC1.45□□□□□ -2.18
TRIM38O00635 MIR181B2-201ENST00000385004 89 ntBASIC1.45□□□□□ -2.18
TRIM38O00635 MIR1304-201ENST00000408243 91 ntBASIC1.45□□□□□ -2.18
TRIM38O00635 MIR1276-201ENST00000408707 83 ntBASIC1.45□□□□□ -2.18
TRIM38O00635 AL354695.1-201ENST00000427935 228 ntBASIC1.45□□□□□ -2.18
TRIM38O00635 AL161932.1-201ENST00000437408 146 ntBASIC1.45□□□□□ -2.18
TRIM38O00635 SPINT5P-201ENST00000448174 155 ntBASIC1.45□□□□□ -2.18
TRIM38O00635 RNU7-48P-201ENST00000458875 63 ntBASIC1.45□□□□□ -2.18
TRIM38O00635 RNU6-947P-201ENST00000516264 106 ntBASIC1.45□□□□□ -2.18
TRIM38O00635 MIR4712-201ENST00000583750 82 ntBASIC1.45□□□□□ -2.18
TRIM38O00635 RNU6-90P-201ENST00000606352 106 ntBASIC1.45□□□□□ -2.18
TRIM38O00635 AC012676.2-201ENST00000619258 186 ntBASIC1.45□□□□□ -2.18
TRIM38O00635 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.45□□□□□ -2.18
TRIM38O00635 AL161722.3-201ENST00000605789 2983 ntBASIC1.44□□□□□ -2.18
TRIM38O00635 MIR520C-201ENST00000385005 87 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 218.1 ms