Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RNU7-121P-201ENST00000516604 62 ntBASIC0.25□□□□□ -2.37
NPIPA3F8WFD2 RNU7-137P-201ENST00000516788 62 ntBASIC0.25□□□□□ -2.37
NPIPA3F8WFD2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.25□□□□□ -2.37
NPIPA3F8WFD2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
NPIPA3F8WFD2 RNU6-309P-201ENST00000364573 106 ntBASIC0.24□□□□□ -2.37
NPIPA3F8WFD2 RNU6-1318P-201ENST00000365389 103 ntBASIC0.24□□□□□ -2.37
NPIPA3F8WFD2 Y_RNA.476-201ENST00000384347 108 ntBASIC0.24□□□□□ -2.37
NPIPA3F8WFD2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
NPIPA3F8WFD2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.24□□□□□ -2.37
NPIPA3F8WFD2 RNU5E-3P-201ENST00000515913 68 ntBASIC0.24□□□□□ -2.37
NPIPA3F8WFD2 RNU6-135P-201ENST00000516769 101 ntBASIC0.24□□□□□ -2.37
NPIPA3F8WFD2 AL359881.1-201ENST00000602916 267 ntBASIC0.24□□□□□ -2.37
NPIPA3F8WFD2 AL109933.3-201ENST00000619095 188 ntBASIC0.24□□□□□ -2.37
NPIPA3F8WFD2 MIR101-2-201ENST00000362195 79 ntBASIC0.23□□□□□ -2.37
NPIPA3F8WFD2 Y_RNA.85-201ENST00000363014 111 ntBASIC0.23□□□□□ -2.37
NPIPA3F8WFD2 RNA5SP245-201ENST00000364239 121 ntBASIC0.23□□□□□ -2.37
NPIPA3F8WFD2 Y_RNA.240-201ENST00000364469 95 ntBASIC0.23□□□□□ -2.37
NPIPA3F8WFD2 RNU6-200P-201ENST00000364743 107 ntBASIC0.23□□□□□ -2.37
NPIPA3F8WFD2 RNU7-123P-201ENST00000515911 60 ntBASIC0.23□□□□□ -2.37
NPIPA3F8WFD2 RNU6-138P-201ENST00000515952 107 ntBASIC0.23□□□□□ -2.37
NPIPA3F8WFD2 Y_RNA.662-201ENST00000516028 97 ntBASIC0.23□□□□□ -2.37
NPIPA3F8WFD2 RNA5SP227-201ENST00000516184 113 ntBASIC0.23□□□□□ -2.37
NPIPA3F8WFD2 Y_RNA.690-201ENST00000516603 95 ntBASIC0.23□□□□□ -2.37
NPIPA3F8WFD2 AC138749.4-201ENST00000563970 127 ntBASIC0.23□□□□□ -2.37
NPIPA3F8WFD2 Y_RNA.119-201ENST00000363301 96 ntBASIC0.22□□□□□ -2.37
NPIPA3F8WFD2 SNORD114-10-201ENST00000363409 72 ntBASIC0.22□□□□□ -2.37
NPIPA3F8WFD2 Y_RNA.366-201ENST00000365540 102 ntBASIC0.22□□□□□ -2.37
NPIPA3F8WFD2 SNORD28-201ENST00000384706 75 ntBASIC0.22□□□□□ -2.37
NPIPA3F8WFD2 MIRLET7F2-201ENST00000385277 83 ntBASIC0.22□□□□□ -2.37
NPIPA3F8WFD2 RNU2-59P-201ENST00000410482 191 ntBASIC0.22□□□□□ -2.37
NPIPA3F8WFD2 AC073261.1-201ENST00000429409 121 ntBASIC0.22□□□□□ -2.37
NPIPA3F8WFD2 AC069271.1-201ENST00000445577 156 ntBASIC0.22□□□□□ -2.37
NPIPA3F8WFD2 Y_RNA.651-201ENST00000459380 103 ntBASIC0.22□□□□□ -2.37
NPIPA3F8WFD2 Y_RNA.686-201ENST00000516548 134 ntBASIC0.22□□□□□ -2.37
NPIPA3F8WFD2 SCARNA16.5-201ENST00000517114 183 ntBASIC0.22□□□□□ -2.37
NPIPA3F8WFD2 RNA5SP47-201ENST00000517230 109 ntBASIC0.22□□□□□ -2.37
NPIPA3F8WFD2 MIR7107-201ENST00000611489 80 ntBASIC0.22□□□□□ -2.37
NPIPA3F8WFD2 SNORA63.5-201ENST00000363548 123 ntBASIC0.21□□□□□ -2.38
NPIPA3F8WFD2 RNU4-69P-201ENST00000410677 143 ntBASIC0.21□□□□□ -2.38
NPIPA3F8WFD2 RNU7-120P-201ENST00000459334 63 ntBASIC0.21□□□□□ -2.38
NPIPA3F8WFD2 MIR4639-201ENST00000584938 69 ntBASIC0.21□□□□□ -2.38
NPIPA3F8WFD2 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
NPIPA3F8WFD2 AC244669.1-204ENST00000621564 178 ntBASIC0.21□□□□□ -2.38
NPIPA3F8WFD2 Y_RNA.298-201ENST00000364960 107 ntBASIC0.2□□□□□ -2.38
NPIPA3F8WFD2 RNU6-815P-201ENST00000384080 113 ntBASIC0.2□□□□□ -2.38
NPIPA3F8WFD2 MT-TG-201ENST00000387429 68 ntBASIC0.2□□□□□ -2.38
NPIPA3F8WFD2 MIR1270-201ENST00000459320 83 ntBASIC0.2□□□□□ -2.38
NPIPA3F8WFD2 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.2□□□□□ -2.38
NPIPA3F8WFD2 AC112693.2-201ENST00000556538 232 ntBASIC0.2□□□□□ -2.38
NPIPA3F8WFD2 AC023932.2-201ENST00000603176 175 ntBASIC0.2□□□□□ -2.38
NPIPA3F8WFD2 AC091304.10-201ENST00000641554 121 ntBASIC0.2□□□□□ -2.38
NPIPA3F8WFD2 Y_RNA.29-201ENST00000362570 113 ntBASIC0.19□□□□□ -2.38
NPIPA3F8WFD2 Y_RNA.49-201ENST00000362714 112 ntBASIC0.19□□□□□ -2.38
NPIPA3F8WFD2 RNU6-1099P-201ENST00000363533 107 ntBASIC0.19□□□□□ -2.38
NPIPA3F8WFD2 RNU6-682P-201ENST00000363843 106 ntBASIC0.19□□□□□ -2.38
NPIPA3F8WFD2 RNU4-67P-201ENST00000364569 141 ntBASIC0.19□□□□□ -2.38
NPIPA3F8WFD2 Y_RNA.299-201ENST00000364973 94 ntBASIC0.19□□□□□ -2.38
NPIPA3F8WFD2 AL603914.1-201ENST00000401964 204 ntBASIC0.19□□□□□ -2.38
NPIPA3F8WFD2 RNU6-863P-201ENST00000515989 104 ntBASIC0.19□□□□□ -2.38
NPIPA3F8WFD2 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
NPIPA3F8WFD2 AC098479.1-201ENST00000609225 154 ntBASIC0.19□□□□□ -2.38
NPIPA3F8WFD2 MIR6828-201ENST00000636181 60 ntBASIC0.19□□□□□ -2.38
NPIPA3F8WFD2 Y_RNA.251-201ENST00000364551 99 ntBASIC0.18□□□□□ -2.38
NPIPA3F8WFD2 Y_RNA.272-201ENST00000364696 102 ntBASIC0.18□□□□□ -2.38
NPIPA3F8WFD2 RNU4-11P-201ENST00000365287 132 ntBASIC0.18□□□□□ -2.38
NPIPA3F8WFD2 Y_RNA.374-201ENST00000365606 101 ntBASIC0.18□□□□□ -2.38
NPIPA3F8WFD2 Y_RNA.441-201ENST00000384123 112 ntBASIC0.18□□□□□ -2.38
NPIPA3F8WFD2 TUG1_4.1-201ENST00000619464 181 ntBASIC0.18□□□□□ -2.38
NPIPA3F8WFD2 Y_RNA.56-201ENST00000362798 112 ntBASIC0.17□□□□□ -2.38
NPIPA3F8WFD2 Y_RNA.423-201ENST00000384057 113 ntBASIC0.17□□□□□ -2.38
NPIPA3F8WFD2 RNU6-1321P-201ENST00000390905 107 ntBASIC0.17□□□□□ -2.38
NPIPA3F8WFD2 RNA5SP63-201ENST00000391225 112 ntBASIC0.17□□□□□ -2.38
NPIPA3F8WFD2 AC074198.2-201ENST00000508153 258 ntBASIC0.17□□□□□ -2.38
NPIPA3F8WFD2 SNORA81.3-201ENST00000517283 198 ntBASIC0.17□□□□□ -2.38
NPIPA3F8WFD2 AL137067.1-201ENST00000615933 120 ntBASIC0.17□□□□□ -2.38
NPIPA3F8WFD2 RNU6-151P-201ENST00000364158 107 ntBASIC0.16□□□□□ -2.38
NPIPA3F8WFD2 RNY1P2-201ENST00000364820 117 ntBASIC0.16□□□□□ -2.38
NPIPA3F8WFD2 RNU6-187P-201ENST00000384139 106 ntBASIC0.16□□□□□ -2.38
NPIPA3F8WFD2 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
NPIPA3F8WFD2 SNORD77B-201ENST00000391112 67 ntBASIC0.16□□□□□ -2.38
NPIPA3F8WFD2 RNU6-1135P-201ENST00000411083 103 ntBASIC0.16□□□□□ -2.38
NPIPA3F8WFD2 RNY4P20-201ENST00000516678 93 ntBASIC0.16□□□□□ -2.38
NPIPA3F8WFD2 AC069113.3-201ENST00000521019 150 ntBASIC0.16□□□□□ -2.38
NPIPA3F8WFD2 MIR4500-201ENST00000579472 76 ntBASIC0.16□□□□□ -2.38
NPIPA3F8WFD2 AC108081.1-201ENST00000604358 221 ntBASIC0.16□□□□□ -2.38
NPIPA3F8WFD2 AC004792.1-201ENST00000614523 137 ntBASIC0.16□□□□□ -2.38
NPIPA3F8WFD2 SNORD115-24-201ENST00000363528 82 ntBASIC0.15□□□□□ -2.39
NPIPA3F8WFD2 RNU6-429P-201ENST00000384582 108 ntBASIC0.15□□□□□ -2.39
NPIPA3F8WFD2 MIR206-201ENST00000384872 86 ntBASIC0.15□□□□□ -2.39
NPIPA3F8WFD2 MIR6718-201ENST00000616153 80 ntBASIC0.15□□□□□ -2.39
NPIPA3F8WFD2 MIR2909-201ENST00000617113 69 ntBASIC0.15□□□□□ -2.39
NPIPA3F8WFD2 MIR6755-201ENST00000619993 66 ntBASIC0.15□□□□□ -2.39
NPIPA3F8WFD2 RNA5SP257-201ENST00000363023 116 ntBASIC0.14□□□□□ -2.39
NPIPA3F8WFD2 Y_RNA.257-201ENST00000364596 102 ntBASIC0.14□□□□□ -2.39
NPIPA3F8WFD2 Y_RNA.448-201ENST00000384185 108 ntBASIC0.14□□□□□ -2.39
NPIPA3F8WFD2 RNU6-1104P-201ENST00000384723 104 ntBASIC0.14□□□□□ -2.39
NPIPA3F8WFD2 Y_RNA.700-201ENST00000516806 100 ntBASIC0.14□□□□□ -2.39
NPIPA3F8WFD2 MIR548H5-201ENST00000580314 60 ntBASIC0.14□□□□□ -2.39
NPIPA3F8WFD2 MIR4315-1-201ENST00000636800 73 ntBASIC0.14□□□□□ -2.39
NPIPA3F8WFD2 MIR4315-2-201ENST00000640925 73 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms