Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 SNORD41.1-201ENST00000391000 69 ntBASIC-0.6□□□□□ -2.51
HMGB1P1B2RPK0 SNORD110-201ENST00000408189 75 ntBASIC-0.6□□□□□ -2.51
HMGB1P1B2RPK0 MIR1270-201ENST00000459320 83 ntBASIC-0.6□□□□□ -2.51
HMGB1P1B2RPK0 MIR4308-201ENST00000580634 81 ntBASIC-0.6□□□□□ -2.51
HMGB1P1B2RPK0 AL162726.3-218ENST00000636401 95 ntBASIC-0.6□□□□□ -2.51
HMGB1P1B2RPK0 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.61□□□□□ -2.51
HMGB1P1B2RPK0 BX276092.1-201ENST00000427368 251 ntBASIC-0.61□□□□□ -2.51
HMGB1P1B2RPK0 AC109327.2-201ENST00000448339 378 ntBASIC-0.61□□□□□ -2.51
HMGB1P1B2RPK0 SNORD126-201ENST00000459475 77 ntBASIC-0.61□□□□□ -2.51
HMGB1P1B2RPK0 MTND1P19-201ENST00000511780 315 ntBASIC-0.61□□□□□ -2.51
HMGB1P1B2RPK0 RNA5SP236-201ENST00000516169 116 ntBASIC-0.61□□□□□ -2.51
HMGB1P1B2RPK0 MIR4645-201ENST00000583158 77 ntBASIC-0.61□□□□□ -2.51
HMGB1P1B2RPK0 MIR8064-201ENST00000612863 90 ntBASIC-0.61□□□□□ -2.51
HMGB1P1B2RPK0 MIR2909-201ENST00000617113 69 ntBASIC-0.61□□□□□ -2.51
HMGB1P1B2RPK0 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.62□□□□□ -2.51
HMGB1P1B2RPK0 SNORD27-201ENST00000363981 72 ntBASIC-0.62□□□□□ -2.51
HMGB1P1B2RPK0 RNY4P28-201ENST00000365281 93 ntBASIC-0.62□□□□□ -2.51
HMGB1P1B2RPK0 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.62□□□□□ -2.51
HMGB1P1B2RPK0 IGLVI-20-201ENST00000519296 130 ntBASIC-0.62□□□□□ -2.51
HMGB1P1B2RPK0 AC021443.1-201ENST00000604478 211 ntBASIC-0.62□□□□□ -2.51
HMGB1P1B2RPK0 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.62□□□□□ -2.51
HMGB1P1B2RPK0 MIR4788-201ENST00000639104 80 ntBASIC-0.62□□□□□ -2.51
HMGB1P1B2RPK0 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.63□□□□□ -2.51
HMGB1P1B2RPK0 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.63□□□□□ -2.51
HMGB1P1B2RPK0 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.63□□□□□ -2.51
HMGB1P1B2RPK0 MIR876-201ENST00000401147 81 ntBASIC-0.63□□□□□ -2.51
HMGB1P1B2RPK0 RNA5SP484-201ENST00000458857 111 ntBASIC-0.63□□□□□ -2.51
HMGB1P1B2RPK0 RNU7-164P-201ENST00000459221 62 ntBASIC-0.63□□□□□ -2.51
HMGB1P1B2RPK0 AC138907.4-201ENST00000570107 226 ntBASIC-0.63□□□□□ -2.51
HMGB1P1B2RPK0 AP001094.1-201ENST00000579805 193 ntBASIC-0.63□□□□□ -2.51
HMGB1P1B2RPK0 MIR4263-201ENST00000584745 83 ntBASIC-0.63□□□□□ -2.51
HMGB1P1B2RPK0 AC084368.1-201ENST00000620935 65 ntBASIC-0.63□□□□□ -2.51
HMGB1P1B2RPK0 U6.106-201ENST00000636360 105 ntBASIC-0.63□□□□□ -2.51
HMGB1P1B2RPK0 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.64□□□□□ -2.51
HMGB1P1B2RPK0 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.64□□□□□ -2.51
HMGB1P1B2RPK0 RNU6-275P-201ENST00000364910 107 ntBASIC-0.64□□□□□ -2.51
HMGB1P1B2RPK0 MIR329-2-201ENST00000385029 84 ntBASIC-0.64□□□□□ -2.51
HMGB1P1B2RPK0 HMGN2P22-201ENST00000427588 175 ntBASIC-0.64□□□□□ -2.51
HMGB1P1B2RPK0 uc_338.36-201ENST00000622331 158 ntBASIC-0.64□□□□□ -2.51
HMGB1P1B2RPK0 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.65□□□□□ -2.51
HMGB1P1B2RPK0 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.65□□□□□ -2.51
HMGB1P1B2RPK0 RNU6-449P-201ENST00000383914 107 ntBASIC-0.65□□□□□ -2.51
HMGB1P1B2RPK0 MIR3124-201ENST00000582636 67 ntBASIC-0.65□□□□□ -2.51
HMGB1P1B2RPK0 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.66□□□□□ -2.52
HMGB1P1B2RPK0 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.66□□□□□ -2.52
HMGB1P1B2RPK0 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.66□□□□□ -2.52
HMGB1P1B2RPK0 RNU6-768P-201ENST00000384683 107 ntBASIC-0.66□□□□□ -2.52
HMGB1P1B2RPK0 MIR206-201ENST00000384872 86 ntBASIC-0.66□□□□□ -2.52
HMGB1P1B2RPK0 MTND2P23-201ENST00000422990 651 ntBASIC-0.66□□□□□ -2.52
HMGB1P1B2RPK0 RNU7-48P-201ENST00000458875 63 ntBASIC-0.66□□□□□ -2.52
HMGB1P1B2RPK0 MIR548AZ-201ENST00000616567 95 ntBASIC-0.66□□□□□ -2.52
HMGB1P1B2RPK0 FTX_2.1-201ENST00000618816 94 ntBASIC-0.66□□□□□ -2.52
HMGB1P1B2RPK0 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.67□□□□□ -2.52
HMGB1P1B2RPK0 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.67□□□□□ -2.52
HMGB1P1B2RPK0 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.67□□□□□ -2.52
HMGB1P1B2RPK0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.67□□□□□ -2.52
HMGB1P1B2RPK0 RNU6-797P-201ENST00000363101 109 ntBASIC-0.68□□□□□ -2.52
HMGB1P1B2RPK0 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.68□□□□□ -2.52
HMGB1P1B2RPK0 RNU6-811P-201ENST00000384069 107 ntBASIC-0.68□□□□□ -2.52
HMGB1P1B2RPK0 MIR196A2-201ENST00000385189 110 ntBASIC-0.68□□□□□ -2.52
HMGB1P1B2RPK0 MIR613-201ENST00000385248 95 ntBASIC-0.68□□□□□ -2.52
HMGB1P1B2RPK0 RNU4-69P-201ENST00000410677 143 ntBASIC-0.68□□□□□ -2.52
HMGB1P1B2RPK0 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.68□□□□□ -2.52
HMGB1P1B2RPK0 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.68□□□□□ -2.52
HMGB1P1B2RPK0 AC244250.2-201ENST00000418731 148 ntBASIC-0.68□□□□□ -2.52
HMGB1P1B2RPK0 AC097635.1-201ENST00000450678 155 ntBASIC-0.68□□□□□ -2.52
HMGB1P1B2RPK0 RNU6-818P-201ENST00000364837 108 ntBASIC-0.69□□□□□ -2.52
HMGB1P1B2RPK0 MIR548H3-201ENST00000408771 118 ntBASIC-0.69□□□□□ -2.52
HMGB1P1B2RPK0 RNU7-123P-201ENST00000515911 60 ntBASIC-0.69□□□□□ -2.52
HMGB1P1B2RPK0 SNORA25.13-201ENST00000516395 103 ntBASIC-0.69□□□□□ -2.52
HMGB1P1B2RPK0 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.69□□□□□ -2.52
HMGB1P1B2RPK0 AL109933.3-201ENST00000619095 188 ntBASIC-0.69□□□□□ -2.52
HMGB1P1B2RPK0 MIR655-201ENST00000362159 97 ntBASIC-0.7□□□□□ -2.52
HMGB1P1B2RPK0 RNU6-509P-201ENST00000363519 107 ntBASIC-0.7□□□□□ -2.52
HMGB1P1B2RPK0 RNU6-865P-201ENST00000364772 107 ntBASIC-0.7□□□□□ -2.52
HMGB1P1B2RPK0 MIR516B1-201ENST00000385211 90 ntBASIC-0.7□□□□□ -2.52
HMGB1P1B2RPK0 RNU7-195P-201ENST00000458793 62 ntBASIC-0.7□□□□□ -2.52
HMGB1P1B2RPK0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.7□□□□□ -2.52
HMGB1P1B2RPK0 AC009779.6-201ENST00000603972 165 ntBASIC-0.7□□□□□ -2.52
HMGB1P1B2RPK0 MIR6507-201ENST00000613630 70 ntBASIC-0.7□□□□□ -2.52
HMGB1P1B2RPK0 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.71□□□□□ -2.52
HMGB1P1B2RPK0 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.71□□□□□ -2.52
HMGB1P1B2RPK0 RNU6-284P-201ENST00000411105 106 ntBASIC-0.71□□□□□ -2.52
HMGB1P1B2RPK0 SNORD127-201ENST00000458892 86 ntBASIC-0.71□□□□□ -2.52
HMGB1P1B2RPK0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.71□□□□□ -2.52
HMGB1P1B2RPK0 AC011603.4-201ENST00000611325 277 ntBASIC-0.71□□□□□ -2.52
HMGB1P1B2RPK0 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.72□□□□□ -2.52
HMGB1P1B2RPK0 RNA5SP205-201ENST00000364653 136 ntBASIC-0.73□□□□□ -2.53
HMGB1P1B2RPK0 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.73□□□□□ -2.53
HMGB1P1B2RPK0 SNORD77B-201ENST00000391112 67 ntBASIC-0.73□□□□□ -2.53
HMGB1P1B2RPK0 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.73□□□□□ -2.53
HMGB1P1B2RPK0 RNU7-13P-201ENST00000516413 62 ntBASIC-0.73□□□□□ -2.53
HMGB1P1B2RPK0 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.73□□□□□ -2.53
HMGB1P1B2RPK0 AL590491.3-201ENST00000610731 82 ntBASIC-0.73□□□□□ -2.53
HMGB1P1B2RPK0 SNORD114-11-201ENST00000363738 75 ntBASIC-0.74□□□□□ -2.53
HMGB1P1B2RPK0 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.74□□□□□ -2.53
HMGB1P1B2RPK0 U8.6-201ENST00000364939 135 ntBASIC-0.74□□□□□ -2.53
HMGB1P1B2RPK0 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.74□□□□□ -2.53
HMGB1P1B2RPK0 MIR548F4-201ENST00000408515 105 ntBASIC-0.74□□□□□ -2.53
HMGB1P1B2RPK0 SNORD63B-201ENST00000411005 70 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms