Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 MIR1304-201ENST00000408243 91 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 RNU6-447P-201ENST00000410293 104 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 RNU6-1118P-201ENST00000410382 104 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 RNU6-1076P-201ENST00000410397 104 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 RNU6-355P-201ENST00000410427 104 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 RNU6-791P-201ENST00000410467 104 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 RNU6-705P-201ENST00000410601 104 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 RNU6-1100P-201ENST00000410691 104 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 RNU6-860P-201ENST00000410860 104 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 RNU6-1217P-201ENST00000411276 104 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 RNU6-785P-201ENST00000411324 104 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 AL035461.1-201ENST00000421490 332 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 AC063976.4-201ENST00000421971 163 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 AL354695.1-201ENST00000427935 228 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 MIR1270-201ENST00000459320 83 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 RNU7-2P-201ENST00000516096 62 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 SNORD67.1-201ENST00000516618 108 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 AC068339.1-201ENST00000526965 141 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 MIR4421-201ENST00000578133 69 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.66□□□□□ -2.14
DDX41Q9UJV9 U6.90-201ENST00000614007 104 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 U6.70-201ENST00000620287 104 ntBASIC1.66□□□□□ -2.14
DDX41Q9UJV9 RNU6-363P-201ENST00000362895 105 ntBASIC1.65□□□□□ -2.15
DDX41Q9UJV9 Y_RNA.155-201ENST00000363632 101 ntBASIC1.65□□□□□ -2.15
DDX41Q9UJV9 SNORA7.1-201ENST00000363750 139 ntBASIC1.65□□□□□ -2.15
DDX41Q9UJV9 RNU4-67P-201ENST00000364569 141 ntBASIC1.65□□□□□ -2.15
DDX41Q9UJV9 RNU6-1107P-201ENST00000364817 104 ntBASIC1.65□□□□□ -2.15
DDX41Q9UJV9 SNORD115-35-201ENST00000365122 82 ntBASIC1.65□□□□□ -2.15
DDX41Q9UJV9 SNORA22-201ENST00000383907 134 ntBASIC1.65□□□□□ -2.15
DDX41Q9UJV9 RNU6-409P-201ENST00000384114 104 ntBASIC1.65□□□□□ -2.15
DDX41Q9UJV9 RNA5SP61-201ENST00000516453 100 ntBASIC1.65□□□□□ -2.15
DDX41Q9UJV9 Y_RNA.773-201ENST00000607168 90 ntBASIC1.65□□□□□ -2.15
DDX41Q9UJV9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.64□□□□□ -2.15
DDX41Q9UJV9 MIR26B-201ENST00000362251 77 ntBASIC1.64□□□□□ -2.15
DDX41Q9UJV9 Y_RNA.224-201ENST00000364308 111 ntBASIC1.64□□□□□ -2.15
DDX41Q9UJV9 RNU6-934P-201ENST00000365154 107 ntBASIC1.64□□□□□ -2.15
DDX41Q9UJV9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.64□□□□□ -2.15
DDX41Q9UJV9 AC023790.1-201ENST00000482174 347 ntBASIC1.64□□□□□ -2.15
DDX41Q9UJV9 RNU7-137P-201ENST00000516788 62 ntBASIC1.64□□□□□ -2.15
DDX41Q9UJV9 AC133485.1-201ENST00000567176 124 ntBASIC1.64□□□□□ -2.15
DDX41Q9UJV9 MIR1255B1-201ENST00000636325 63 ntBASIC1.64□□□□□ -2.15
DDX41Q9UJV9 SNORA25.8-201ENST00000364831 128 ntBASIC1.63□□□□□ -2.15
DDX41Q9UJV9 MIR206-201ENST00000384872 86 ntBASIC1.63□□□□□ -2.15
DDX41Q9UJV9 RNY4P18-201ENST00000391107 89 ntBASIC1.63□□□□□ -2.15
DDX41Q9UJV9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.63□□□□□ -2.15
DDX41Q9UJV9 RNU6-955P-201ENST00000410497 104 ntBASIC1.63□□□□□ -2.15
DDX41Q9UJV9 AC067940.1-201ENST00000458411 300 ntBASIC1.63□□□□□ -2.15
DDX41Q9UJV9 RNU1-92P-201ENST00000517017 135 ntBASIC1.63□□□□□ -2.15
DDX41Q9UJV9 MIR6504-201ENST00000613520 61 ntBASIC1.63□□□□□ -2.15
DDX41Q9UJV9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
DDX41Q9UJV9 Y_RNA.323-201ENST00000365157 109 ntBASIC1.62□□□□□ -2.15
DDX41Q9UJV9 MIR489-201ENST00000384923 84 ntBASIC1.62□□□□□ -2.15
DDX41Q9UJV9 MIR1276-201ENST00000408707 83 ntBASIC1.62□□□□□ -2.15
DDX41Q9UJV9 SNORA7.5-201ENST00000410672 110 ntBASIC1.62□□□□□ -2.15
DDX41Q9UJV9 RNU6-733P-201ENST00000410759 104 ntBASIC1.62□□□□□ -2.15
DDX41Q9UJV9 AC002429.1-201ENST00000437672 148 ntBASIC1.62□□□□□ -2.15
DDX41Q9UJV9 RNU6-521P-201ENST00000516663 105 ntBASIC1.62□□□□□ -2.15
DDX41Q9UJV9 AC019288.1-201ENST00000557918 224 ntBASIC1.62□□□□□ -2.15
DDX41Q9UJV9 MIR5009-201ENST00000578736 100 ntBASIC1.62□□□□□ -2.15
DDX41Q9UJV9 RNU6-865P-201ENST00000364772 107 ntBASIC1.61□□□□□ -2.15
DDX41Q9UJV9 U8.6-201ENST00000364939 135 ntBASIC1.61□□□□□ -2.15
DDX41Q9UJV9 RNU6-1014P-201ENST00000383940 103 ntBASIC1.61□□□□□ -2.15
DDX41Q9UJV9 MIR1302-5-201ENST00000408164 150 ntBASIC1.61□□□□□ -2.15
DDX41Q9UJV9 SNORD93-201ENST00000408813 74 ntBASIC1.61□□□□□ -2.15
DDX41Q9UJV9 Y_RNA.98-201ENST00000363109 102 ntBASIC1.6□□□□□ -2.15
DDX41Q9UJV9 MIR1257-201ENST00000408490 117 ntBASIC1.6□□□□□ -2.15
DDX41Q9UJV9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.6□□□□□ -2.15
DDX41Q9UJV9 RNU6-94P-201ENST00000607728 107 ntBASIC1.6□□□□□ -2.15
DDX41Q9UJV9 AL157834.3-201ENST00000615543 103 ntBASIC1.6□□□□□ -2.15
DDX41Q9UJV9 AC027335.2-201ENST00000624030 375 ntBASIC1.6□□□□□ -2.15
DDX41Q9UJV9 AL512310.12-203ENST00000640543 90 ntBASIC1.6□□□□□ -2.15
DDX41Q9UJV9 AC023934.1-201ENST00000574529 2389 ntBASIC1.6□□□□□ -2.15
DDX41Q9UJV9 AL391516.1-201ENST00000554380 2449 ntBASIC1.6□□□□□ -2.15
DDX41Q9UJV9 Y_RNA.448-201ENST00000384185 108 ntBASIC1.59□□□□□ -2.15
DDX41Q9UJV9 SNORD83.1-201ENST00000411362 77 ntBASIC1.59□□□□□ -2.15
DDX41Q9UJV9 snoU13.18-201ENST00000459483 104 ntBASIC1.59□□□□□ -2.15
DDX41Q9UJV9 MIR4771-2-201ENST00000577758 74 ntBASIC1.59□□□□□ -2.15
DDX41Q9UJV9 MIR4771-1-201ENST00000582617 74 ntBASIC1.59□□□□□ -2.15
DDX41Q9UJV9 AC105081.1-201ENST00000617727 106 ntBASIC1.59□□□□□ -2.15
DDX41Q9UJV9 RNU6-44P-201ENST00000384045 107 ntBASIC1.58□□□□□ -2.16
DDX41Q9UJV9 U8.15-201ENST00000390947 134 ntBASIC1.58□□□□□ -2.16
DDX41Q9UJV9 RNU7-48P-201ENST00000458875 63 ntBASIC1.58□□□□□ -2.16
DDX41Q9UJV9 RNU7-185P-201ENST00000459215 60 ntBASIC1.58□□□□□ -2.16
DDX41Q9UJV9 RNU7-40P-201ENST00000516397 64 ntBASIC1.58□□□□□ -2.16
DDX41Q9UJV9 RNU6-1018P-201ENST00000516577 106 ntBASIC1.58□□□□□ -2.16
DDX41Q9UJV9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.58□□□□□ -2.16
DDX41Q9UJV9 uc_338.6-201ENST00000613544 171 ntBASIC1.58□□□□□ -2.16
DDX41Q9UJV9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
DDX41Q9UJV9 MIR150-201ENST00000385048 84 ntBASIC1.57□□□□□ -2.16
DDX41Q9UJV9 RNU6-1321P-201ENST00000390905 107 ntBASIC1.57□□□□□ -2.16
DDX41Q9UJV9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.57□□□□□ -2.16
DDX41Q9UJV9 RPS26P5-201ENST00000418544 335 ntBASIC1.57□□□□□ -2.16
DDX41Q9UJV9 AL353770.2-201ENST00000620024 78 ntBASIC1.57□□□□□ -2.16
DDX41Q9UJV9 MIR1-1-201ENST00000362147 71 ntBASIC1.56□□□□□ -2.16
DDX41Q9UJV9 RNU1-36P-201ENST00000365130 165 ntBASIC1.56□□□□□ -2.16
DDX41Q9UJV9 Y_RNA.328-201ENST00000365208 113 ntBASIC1.56□□□□□ -2.16
DDX41Q9UJV9 RNU6-53P-201ENST00000365367 106 ntBASIC1.56□□□□□ -2.16
DDX41Q9UJV9 RNU6-1113P-201ENST00000384348 107 ntBASIC1.56□□□□□ -2.16
DDX41Q9UJV9 snoU13.21-201ENST00000459368 105 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms