Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 Y_RNA.423-201ENST00000384057 113 ntBASIC0.01□□□□□ -2.41
CLCF1Q9UBD9 RNU6-1232P-201ENST00000516299 86 ntBASIC0.01□□□□□ -2.41
CLCF1Q9UBD9 Y_RNA.812-201ENST00000610788 101 ntBASIC0.01□□□□□ -2.41
CLCF1Q9UBD9 Y_RNA.784-201ENST00000613803 101 ntBASIC0.01□□□□□ -2.41
CLCF1Q9UBD9 Y_RNA.787-201ENST00000616522 101 ntBASIC0.01□□□□□ -2.41
CLCF1Q9UBD9 Y_RNA.780-201ENST00000617336 101 ntBASIC0.01□□□□□ -2.41
CLCF1Q9UBD9 Y_RNA.801-201ENST00000619005 101 ntBASIC0.01□□□□□ -2.41
CLCF1Q9UBD9 SNORD115-2-201ENST00000362842 82 ntBASIC0□□□□□ -2.41
CLCF1Q9UBD9 SNORD114-9-201ENST00000364370 72 ntBASIC0□□□□□ -2.41
CLCF1Q9UBD9 RNU6-923P-201ENST00000364753 107 ntBASIC0□□□□□ -2.41
CLCF1Q9UBD9 SNORD115-20-201ENST00000365099 82 ntBASIC0□□□□□ -2.41
CLCF1Q9UBD9 RNU6-1126P-201ENST00000384002 107 ntBASIC0□□□□□ -2.41
CLCF1Q9UBD9 Y_RNA.521-201ENST00000384560 114 ntBASIC0□□□□□ -2.41
CLCF1Q9UBD9 Y_RNA.562-201ENST00000384695 113 ntBASIC0□□□□□ -2.41
CLCF1Q9UBD9 MIR643-201ENST00000385267 97 ntBASIC0□□□□□ -2.41
CLCF1Q9UBD9 RNA5SP33-201ENST00000516687 98 ntBASIC0□□□□□ -2.41
CLCF1Q9UBD9 RNU6-531P-201ENST00000516694 104 ntBASIC0□□□□□ -2.41
CLCF1Q9UBD9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
CLCF1Q9UBD9 MRPS18CP4-201ENST00000535821 231 ntBASIC0□□□□□ -2.41
CLCF1Q9UBD9 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
CLCF1Q9UBD9 MIR4752-201ENST00000579672 72 ntBASIC0□□□□□ -2.41
CLCF1Q9UBD9 AC104408.1-201ENST00000605241 170 ntBASIC0□□□□□ -2.41
CLCF1Q9UBD9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0□□□□□ -2.41
CLCF1Q9UBD9 MIR101-2-201ENST00000362195 79 ntBASIC-0.01□□□□□ -2.41
CLCF1Q9UBD9 MIR411-201ENST00000362239 96 ntBASIC-0.01□□□□□ -2.41
CLCF1Q9UBD9 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.01□□□□□ -2.41
CLCF1Q9UBD9 RNA5SP133-201ENST00000363368 119 ntBASIC-0.01□□□□□ -2.41
CLCF1Q9UBD9 SNORD27-201ENST00000363981 72 ntBASIC-0.01□□□□□ -2.41
CLCF1Q9UBD9 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.01□□□□□ -2.41
CLCF1Q9UBD9 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.01□□□□□ -2.41
CLCF1Q9UBD9 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.01□□□□□ -2.41
CLCF1Q9UBD9 MIR4308-201ENST00000580634 81 ntBASIC-0.01□□□□□ -2.41
CLCF1Q9UBD9 MIR4768-201ENST00000585270 74 ntBASIC-0.01□□□□□ -2.41
CLCF1Q9UBD9 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.01□□□□□ -2.41
CLCF1Q9UBD9 AC067863.3-201ENST00000624172 122 ntBASIC-0.01□□□□□ -2.41
CLCF1Q9UBD9 RNA5SP257-201ENST00000363023 116 ntBASIC-0.02□□□□□ -2.41
CLCF1Q9UBD9 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.02□□□□□ -2.41
CLCF1Q9UBD9 MTND2P23-201ENST00000422990 651 ntBASIC-0.02□□□□□ -2.41
CLCF1Q9UBD9 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.02□□□□□ -2.41
CLCF1Q9UBD9 RNU7-129P-201ENST00000516128 62 ntBASIC-0.02□□□□□ -2.41
CLCF1Q9UBD9 U6.109-201ENST00000636749 87 ntBASIC-0.02□□□□□ -2.41
CLCF1Q9UBD9 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.03□□□□□ -2.41
CLCF1Q9UBD9 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.03□□□□□ -2.41
CLCF1Q9UBD9 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.03□□□□□ -2.41
CLCF1Q9UBD9 RNU6-738P-201ENST00000384531 106 ntBASIC-0.03□□□□□ -2.41
CLCF1Q9UBD9 MIR610-201ENST00000385139 96 ntBASIC-0.03□□□□□ -2.41
CLCF1Q9UBD9 MIR760-201ENST00000390220 80 ntBASIC-0.03□□□□□ -2.41
CLCF1Q9UBD9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
CLCF1Q9UBD9 SNORD58.1-201ENST00000391313 66 ntBASIC-0.03□□□□□ -2.41
CLCF1Q9UBD9 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.04□□□□□ -2.42
CLCF1Q9UBD9 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.04□□□□□ -2.42
CLCF1Q9UBD9 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.04□□□□□ -2.42
CLCF1Q9UBD9 RNA5SP245-201ENST00000364239 121 ntBASIC-0.04□□□□□ -2.42
CLCF1Q9UBD9 SNORA2A-201ENST00000383885 135 ntBASIC-0.04□□□□□ -2.42
CLCF1Q9UBD9 SNORA32-201ENST00000384072 121 ntBASIC-0.04□□□□□ -2.42
CLCF1Q9UBD9 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.04□□□□□ -2.42
CLCF1Q9UBD9 MIR1302-3-201ENST00000408128 138 ntBASIC-0.04□□□□□ -2.42
CLCF1Q9UBD9 AL360085.1-201ENST00000604713 532 ntBASIC-0.04□□□□□ -2.42
CLCF1Q9UBD9 AC098479.1-201ENST00000609225 154 ntBASIC-0.04□□□□□ -2.42
CLCF1Q9UBD9 MIR499B-201ENST00000636498 73 ntBASIC-0.04□□□□□ -2.42
CLCF1Q9UBD9 SNORD114-16-201ENST00000363044 70 ntBASIC-0.05□□□□□ -2.42
CLCF1Q9UBD9 SNORD114-10-201ENST00000363409 72 ntBASIC-0.05□□□□□ -2.42
CLCF1Q9UBD9 RNU6-690P-201ENST00000365242 106 ntBASIC-0.05□□□□□ -2.42
CLCF1Q9UBD9 RNA5SP128-201ENST00000365305 116 ntBASIC-0.05□□□□□ -2.42
CLCF1Q9UBD9 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.05□□□□□ -2.42
CLCF1Q9UBD9 MIR593-201ENST00000384856 100 ntBASIC-0.05□□□□□ -2.42
CLCF1Q9UBD9 RNU6-127P-201ENST00000390897 107 ntBASIC-0.05□□□□□ -2.42
CLCF1Q9UBD9 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.05□□□□□ -2.42
CLCF1Q9UBD9 RNA5SP236-201ENST00000516169 116 ntBASIC-0.05□□□□□ -2.42
CLCF1Q9UBD9 RNU7-137P-201ENST00000516788 62 ntBASIC-0.05□□□□□ -2.42
CLCF1Q9UBD9 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
CLCF1Q9UBD9 AC138749.4-201ENST00000563970 127 ntBASIC-0.05□□□□□ -2.42
CLCF1Q9UBD9 AC011603.4-201ENST00000611325 277 ntBASIC-0.05□□□□□ -2.42
CLCF1Q9UBD9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.05□□□□□ -2.42
CLCF1Q9UBD9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.05□□□□□ -2.42
CLCF1Q9UBD9 U6.106-201ENST00000636360 105 ntBASIC-0.05□□□□□ -2.42
CLCF1Q9UBD9 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.06□□□□□ -2.42
CLCF1Q9UBD9 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.06□□□□□ -2.42
CLCF1Q9UBD9 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.06□□□□□ -2.42
CLCF1Q9UBD9 SNORA63.5-201ENST00000363548 123 ntBASIC-0.06□□□□□ -2.42
CLCF1Q9UBD9 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.06□□□□□ -2.42
CLCF1Q9UBD9 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.06□□□□□ -2.42
CLCF1Q9UBD9 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.06□□□□□ -2.42
CLCF1Q9UBD9 RNU4-71P-201ENST00000516258 113 ntBASIC-0.06□□□□□ -2.42
CLCF1Q9UBD9 SNORD67.1-201ENST00000516618 108 ntBASIC-0.06□□□□□ -2.42
CLCF1Q9UBD9 MIR4305-201ENST00000583252 102 ntBASIC-0.06□□□□□ -2.42
CLCF1Q9UBD9 SNORD115-24-201ENST00000363528 82 ntBASIC-0.07□□□□□ -2.42
CLCF1Q9UBD9 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.07□□□□□ -2.42
CLCF1Q9UBD9 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.07□□□□□ -2.42
CLCF1Q9UBD9 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.07□□□□□ -2.42
CLCF1Q9UBD9 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
CLCF1Q9UBD9 MIR548L-201ENST00000408303 86 ntBASIC-0.07□□□□□ -2.42
CLCF1Q9UBD9 MTATP6P21-201ENST00000440681 189 ntBASIC-0.07□□□□□ -2.42
CLCF1Q9UBD9 AC244505.6-201ENST00000452829 130 ntBASIC-0.07□□□□□ -2.42
CLCF1Q9UBD9 AC141557.1-201ENST00000540982 400 ntBASIC-0.07□□□□□ -2.42
CLCF1Q9UBD9 AC138869.1-201ENST00000568623 124 ntBASIC-0.07□□□□□ -2.42
CLCF1Q9UBD9 MIR548H5-201ENST00000580314 60 ntBASIC-0.07□□□□□ -2.42
CLCF1Q9UBD9 MIR548AE2-201ENST00000583456 67 ntBASIC-0.07□□□□□ -2.42
CLCF1Q9UBD9 MIR4290-201ENST00000583807 95 ntBASIC-0.07□□□□□ -2.42
CLCF1Q9UBD9 RNU6-818P-201ENST00000364837 108 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms