Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 RNU6-1217P-201ENST00000411276 104 ntBASIC1.35□□□□□ -2.19
SPTLC3Q9NUV7 RNU6-785P-201ENST00000411324 104 ntBASIC1.35□□□□□ -2.19
SPTLC3Q9NUV7 AC067940.1-201ENST00000458411 300 ntBASIC1.35□□□□□ -2.19
SPTLC3Q9NUV7 RNU6-412P-201ENST00000516434 106 ntBASIC1.35□□□□□ -2.19
SPTLC3Q9NUV7 U6.90-201ENST00000614007 104 ntBASIC1.35□□□□□ -2.19
SPTLC3Q9NUV7 U6.70-201ENST00000620287 104 ntBASIC1.35□□□□□ -2.19
SPTLC3Q9NUV7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SPTLC3Q9NUV7 SNORA7.1-201ENST00000363750 139 ntBASIC1.34□□□□□ -2.19
SPTLC3Q9NUV7 MIR618-201ENST00000385287 98 ntBASIC1.34□□□□□ -2.19
SPTLC3Q9NUV7 SNORD67.1-201ENST00000516618 108 ntBASIC1.34□□□□□ -2.19
SPTLC3Q9NUV7 uc_338.6-201ENST00000613544 171 ntBASIC1.34□□□□□ -2.19
SPTLC3Q9NUV7 AL157834.3-201ENST00000615543 103 ntBASIC1.34□□□□□ -2.19
SPTLC3Q9NUV7 AL589743.1-201ENST00000551932 2712 ntBASIC1.34□□□□□ -2.2
SPTLC3Q9NUV7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
SPTLC3Q9NUV7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
SPTLC3Q9NUV7 Y_RNA.344-201ENST00000365381 112 ntBASIC1.33□□□□□ -2.2
SPTLC3Q9NUV7 RNU6-616P-201ENST00000384353 107 ntBASIC1.33□□□□□ -2.2
SPTLC3Q9NUV7 RPS26P5-201ENST00000418544 335 ntBASIC1.33□□□□□ -2.2
SPTLC3Q9NUV7 FABP5P4-201ENST00000437203 171 ntBASIC1.33□□□□□ -2.2
SPTLC3Q9NUV7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.33□□□□□ -2.2
SPTLC3Q9NUV7 RNU7-137P-201ENST00000516788 62 ntBASIC1.33□□□□□ -2.2
SPTLC3Q9NUV7 RNA5SP404-201ENST00000517118 132 ntBASIC1.33□□□□□ -2.2
SPTLC3Q9NUV7 RNU6-94P-201ENST00000607728 107 ntBASIC1.33□□□□□ -2.2
SPTLC3Q9NUV7 MIR8070-201ENST00000616510 88 ntBASIC1.33□□□□□ -2.2
SPTLC3Q9NUV7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.33□□□□□ -2.2
SPTLC3Q9NUV7 Y_RNA.281-201ENST00000364774 94 ntBASIC1.32□□□□□ -2.2
SPTLC3Q9NUV7 Y_RNA.309-201ENST00000365046 111 ntBASIC1.32□□□□□ -2.2
SPTLC3Q9NUV7 SNORA40.6-201ENST00000391153 128 ntBASIC1.32□□□□□ -2.2
SPTLC3Q9NUV7 SNORD83.1-201ENST00000411362 77 ntBASIC1.32□□□□□ -2.2
SPTLC3Q9NUV7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.32□□□□□ -2.2
SPTLC3Q9NUV7 RNU7-40P-201ENST00000516397 64 ntBASIC1.32□□□□□ -2.2
SPTLC3Q9NUV7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.32□□□□□ -2.2
SPTLC3Q9NUV7 MIR3660-201ENST00000584845 100 ntBASIC1.32□□□□□ -2.2
SPTLC3Q9NUV7 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.32□□□□□ -2.2
SPTLC3Q9NUV7 AL391516.1-201ENST00000554380 2449 ntBASIC1.32□□□□□ -2.2
SPTLC3Q9NUV7 Y_RNA.507-201ENST00000384500 99 ntBASIC1.31□□□□□ -2.2
SPTLC3Q9NUV7 U8.15-201ENST00000390947 134 ntBASIC1.31□□□□□ -2.2
SPTLC3Q9NUV7 MIR1257-201ENST00000408490 117 ntBASIC1.31□□□□□ -2.2
SPTLC3Q9NUV7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.31□□□□□ -2.2
SPTLC3Q9NUV7 MIR1912-201ENST00000410389 80 ntBASIC1.31□□□□□ -2.2
SPTLC3Q9NUV7 RNU7-185P-201ENST00000459215 60 ntBASIC1.31□□□□□ -2.2
SPTLC3Q9NUV7 snoU13.21-201ENST00000459368 105 ntBASIC1.31□□□□□ -2.2
SPTLC3Q9NUV7 RNU7-2P-201ENST00000516096 62 ntBASIC1.31□□□□□ -2.2
SPTLC3Q9NUV7 MIR4421-201ENST00000578133 69 ntBASIC1.31□□□□□ -2.2
SPTLC3Q9NUV7 Y_RNA.773-201ENST00000607168 90 ntBASIC1.31□□□□□ -2.2
SPTLC3Q9NUV7 AL162726.3-218ENST00000636401 95 ntBASIC1.31□□□□□ -2.2
SPTLC3Q9NUV7 MIR1-1-201ENST00000362147 71 ntBASIC1.3□□□□□ -2.2
SPTLC3Q9NUV7 Y_RNA.49-201ENST00000362714 112 ntBASIC1.3□□□□□ -2.2
SPTLC3Q9NUV7 RNU6-363P-201ENST00000362895 105 ntBASIC1.3□□□□□ -2.2
SPTLC3Q9NUV7 Y_RNA.85-201ENST00000363014 111 ntBASIC1.3□□□□□ -2.2
SPTLC3Q9NUV7 SNORD115-35-201ENST00000365122 82 ntBASIC1.3□□□□□ -2.2
SPTLC3Q9NUV7 MIR206-201ENST00000384872 86 ntBASIC1.3□□□□□ -2.2
SPTLC3Q9NUV7 AC133485.1-201ENST00000567176 124 ntBASIC1.3□□□□□ -2.2
SPTLC3Q9NUV7 MIR4771-2-201ENST00000577758 74 ntBASIC1.3□□□□□ -2.2
SPTLC3Q9NUV7 MIR4771-1-201ENST00000582617 74 ntBASIC1.3□□□□□ -2.2
SPTLC3Q9NUV7 MIR6078-201ENST00000611069 100 ntBASIC1.3□□□□□ -2.2
SPTLC3Q9NUV7 AL136317.1-201ENST00000612653 226 ntBASIC1.3□□□□□ -2.2
SPTLC3Q9NUV7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.3□□□□□ -2.2
SPTLC3Q9NUV7 AC023934.1-201ENST00000574529 2389 ntBASIC1.3□□□□□ -2.2
SPTLC3Q9NUV7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SPTLC3Q9NUV7 Y_RNA.35-201ENST00000362601 101 ntBASIC1.29□□□□□ -2.2
SPTLC3Q9NUV7 RNU6-392P-201ENST00000364926 101 ntBASIC1.29□□□□□ -2.2
SPTLC3Q9NUV7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.29□□□□□ -2.2
SPTLC3Q9NUV7 SNORD93-201ENST00000408813 74 ntBASIC1.29□□□□□ -2.2
SPTLC3Q9NUV7 RPS29P28-201ENST00000446439 141 ntBASIC1.29□□□□□ -2.2
SPTLC3Q9NUV7 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.29□□□□□ -2.2
SPTLC3Q9NUV7 MIR6129-201ENST00000616087 109 ntBASIC1.29□□□□□ -2.2
SPTLC3Q9NUV7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.2
SPTLC3Q9NUV7 RNU4-67P-201ENST00000364569 141 ntBASIC1.28□□□□□ -2.2
SPTLC3Q9NUV7 SNORD114-24-201ENST00000365029 72 ntBASIC1.28□□□□□ -2.2
SPTLC3Q9NUV7 RNU1-36P-201ENST00000365130 165 ntBASIC1.28□□□□□ -2.2
SPTLC3Q9NUV7 Y_RNA.549-201ENST00000384657 102 ntBASIC1.28□□□□□ -2.2
SPTLC3Q9NUV7 MIR1827-201ENST00000408549 66 ntBASIC1.28□□□□□ -2.2
SPTLC3Q9NUV7 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.28□□□□□ -2.2
SPTLC3Q9NUV7 AL353770.2-201ENST00000620024 78 ntBASIC1.28□□□□□ -2.2
SPTLC3Q9NUV7 AL035470.1-201ENST00000622571 220 ntBASIC1.28□□□□□ -2.2
SPTLC3Q9NUV7 SNORA63.5-201ENST00000363548 123 ntBASIC1.27□□□□□ -2.21
SPTLC3Q9NUV7 RNU6-1325P-201ENST00000364905 105 ntBASIC1.27□□□□□ -2.21
SPTLC3Q9NUV7 RNU6-939P-201ENST00000384634 107 ntBASIC1.27□□□□□ -2.21
SPTLC3Q9NUV7 MIR125B2-201ENST00000385128 89 ntBASIC1.27□□□□□ -2.21
SPTLC3Q9NUV7 MIR100-201ENST00000385259 80 ntBASIC1.27□□□□□ -2.21
SPTLC3Q9NUV7 RNU6-816P-201ENST00000390914 107 ntBASIC1.27□□□□□ -2.21
SPTLC3Q9NUV7 RNU6-1268P-201ENST00000391214 107 ntBASIC1.27□□□□□ -2.21
SPTLC3Q9NUV7 RNU6-1239P-201ENST00000391310 107 ntBASIC1.27□□□□□ -2.21
SPTLC3Q9NUV7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.27□□□□□ -2.21
SPTLC3Q9NUV7 U7.7-201ENST00000459276 60 ntBASIC1.27□□□□□ -2.21
SPTLC3Q9NUV7 RNU6-1110P-201ENST00000516462 101 ntBASIC1.27□□□□□ -2.21
SPTLC3Q9NUV7 RNU6-589P-201ENST00000516485 107 ntBASIC1.27□□□□□ -2.21
SPTLC3Q9NUV7 MIR1255B1-201ENST00000636325 63 ntBASIC1.27□□□□□ -2.21
SPTLC3Q9NUV7 Y_RNA.98-201ENST00000363109 102 ntBASIC1.26□□□□□ -2.21
SPTLC3Q9NUV7 RNU6-409P-201ENST00000384114 104 ntBASIC1.26□□□□□ -2.21
SPTLC3Q9NUV7 RNU6-429P-201ENST00000384582 108 ntBASIC1.26□□□□□ -2.21
SPTLC3Q9NUV7 MIR942-201ENST00000401111 86 ntBASIC1.26□□□□□ -2.21
SPTLC3Q9NUV7 RNU7-48P-201ENST00000458875 63 ntBASIC1.26□□□□□ -2.21
SPTLC3Q9NUV7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.26□□□□□ -2.21
SPTLC3Q9NUV7 RNU6-521P-201ENST00000516663 105 ntBASIC1.26□□□□□ -2.21
SPTLC3Q9NUV7 MIR4676-201ENST00000583078 72 ntBASIC1.26□□□□□ -2.21
SPTLC3Q9NUV7 AC103810.9-201ENST00000606688 112 ntBASIC1.26□□□□□ -2.21
SPTLC3Q9NUV7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.26□□□□□ -2.21
SPTLC3Q9NUV7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms