Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 Y_RNA.120-201ENST00000363304 110 ntBASIC0□□□□□ -2.41
ZCCHC3Q9NUD5 RNA5SP245-201ENST00000364239 121 ntBASIC0□□□□□ -2.41
ZCCHC3Q9NUD5 RNU6-1336P-201ENST00000383886 109 ntBASIC0□□□□□ -2.41
ZCCHC3Q9NUD5 Y_RNA.412-201ENST00000384001 104 ntBASIC0□□□□□ -2.41
ZCCHC3Q9NUD5 RNA5SP236-201ENST00000516169 116 ntBASIC0□□□□□ -2.41
ZCCHC3Q9NUD5 RNA5SP33-201ENST00000516687 98 ntBASIC0□□□□□ -2.41
ZCCHC3Q9NUD5 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
ZCCHC3Q9NUD5 MIR6718-201ENST00000616153 80 ntBASIC0□□□□□ -2.41
ZCCHC3Q9NUD5 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0□□□□□ -2.41
ZCCHC3Q9NUD5 MIR411-201ENST00000362239 96 ntBASIC-0.01□□□□□ -2.41
ZCCHC3Q9NUD5 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
ZCCHC3Q9NUD5 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.01□□□□□ -2.41
ZCCHC3Q9NUD5 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.01□□□□□ -2.41
ZCCHC3Q9NUD5 MIR193B-201ENST00000384907 83 ntBASIC-0.01□□□□□ -2.41
ZCCHC3Q9NUD5 MIR613-201ENST00000385248 95 ntBASIC-0.01□□□□□ -2.41
ZCCHC3Q9NUD5 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
ZCCHC3Q9NUD5 AC104408.1-201ENST00000605241 170 ntBASIC-0.01□□□□□ -2.41
ZCCHC3Q9NUD5 U6.106-201ENST00000636360 105 ntBASIC-0.01□□□□□ -2.41
ZCCHC3Q9NUD5 U6.109-201ENST00000636749 87 ntBASIC-0.01□□□□□ -2.41
ZCCHC3Q9NUD5 SNORA63.5-201ENST00000363548 123 ntBASIC-0.02□□□□□ -2.41
ZCCHC3Q9NUD5 SNORA32-201ENST00000384072 121 ntBASIC-0.02□□□□□ -2.41
ZCCHC3Q9NUD5 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.02□□□□□ -2.41
ZCCHC3Q9NUD5 MIR489-201ENST00000384923 84 ntBASIC-0.02□□□□□ -2.41
ZCCHC3Q9NUD5 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.02□□□□□ -2.41
ZCCHC3Q9NUD5 RNU7-137P-201ENST00000516788 62 ntBASIC-0.02□□□□□ -2.41
ZCCHC3Q9NUD5 AL360085.1-201ENST00000604713 532 ntBASIC-0.02□□□□□ -2.41
ZCCHC3Q9NUD5 SNORD114-5-201ENST00000362928 70 ntBASIC-0.03□□□□□ -2.41
ZCCHC3Q9NUD5 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.03□□□□□ -2.41
ZCCHC3Q9NUD5 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.03□□□□□ -2.41
ZCCHC3Q9NUD5 SNORA2A-201ENST00000383885 135 ntBASIC-0.03□□□□□ -2.41
ZCCHC3Q9NUD5 MIR760-201ENST00000390220 80 ntBASIC-0.03□□□□□ -2.41
ZCCHC3Q9NUD5 MIR548H2-201ENST00000408874 88 ntBASIC-0.03□□□□□ -2.41
ZCCHC3Q9NUD5 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.03□□□□□ -2.41
ZCCHC3Q9NUD5 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.03□□□□□ -2.41
ZCCHC3Q9NUD5 AC138749.4-201ENST00000563970 127 ntBASIC-0.03□□□□□ -2.41
ZCCHC3Q9NUD5 MIR4290-201ENST00000583807 95 ntBASIC-0.03□□□□□ -2.41
ZCCHC3Q9NUD5 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.03□□□□□ -2.41
ZCCHC3Q9NUD5 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
ZCCHC3Q9NUD5 RNU6-690P-201ENST00000365242 106 ntBASIC-0.04□□□□□ -2.42
ZCCHC3Q9NUD5 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.04□□□□□ -2.42
ZCCHC3Q9NUD5 RNU6-127P-201ENST00000390897 107 ntBASIC-0.04□□□□□ -2.42
ZCCHC3Q9NUD5 MTCYBP9-201ENST00000431021 303 ntBASIC-0.04□□□□□ -2.42
ZCCHC3Q9NUD5 RNU4-71P-201ENST00000516258 113 ntBASIC-0.04□□□□□ -2.42
ZCCHC3Q9NUD5 MIR4305-201ENST00000583252 102 ntBASIC-0.04□□□□□ -2.42
ZCCHC3Q9NUD5 AC098479.1-201ENST00000609225 154 ntBASIC-0.04□□□□□ -2.42
ZCCHC3Q9NUD5 MIR101-2-201ENST00000362195 79 ntBASIC-0.05□□□□□ -2.42
ZCCHC3Q9NUD5 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.05□□□□□ -2.42
ZCCHC3Q9NUD5 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.05□□□□□ -2.42
ZCCHC3Q9NUD5 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.05□□□□□ -2.42
ZCCHC3Q9NUD5 RNU6-756P-201ENST00000383997 107 ntBASIC-0.05□□□□□ -2.42
ZCCHC3Q9NUD5 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.05□□□□□ -2.42
ZCCHC3Q9NUD5 RNU6-768P-201ENST00000384683 107 ntBASIC-0.05□□□□□ -2.42
ZCCHC3Q9NUD5 SNORD67.1-201ENST00000516618 108 ntBASIC-0.05□□□□□ -2.42
ZCCHC3Q9NUD5 MIR1273G-201ENST00000577677 100 ntBASIC-0.05□□□□□ -2.42
ZCCHC3Q9NUD5 MIR548AE2-201ENST00000583456 67 ntBASIC-0.05□□□□□ -2.42
ZCCHC3Q9NUD5 AC011603.4-201ENST00000611325 277 ntBASIC-0.05□□□□□ -2.42
ZCCHC3Q9NUD5 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.06□□□□□ -2.42
ZCCHC3Q9NUD5 SNORD114-10-201ENST00000363409 72 ntBASIC-0.06□□□□□ -2.42
ZCCHC3Q9NUD5 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.06□□□□□ -2.42
ZCCHC3Q9NUD5 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.06□□□□□ -2.42
ZCCHC3Q9NUD5 RNU6-702P-201ENST00000364982 107 ntBASIC-0.06□□□□□ -2.42
ZCCHC3Q9NUD5 RNA5SP128-201ENST00000365305 116 ntBASIC-0.06□□□□□ -2.42
ZCCHC3Q9NUD5 RNU6-716P-201ENST00000365621 103 ntBASIC-0.06□□□□□ -2.42
ZCCHC3Q9NUD5 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.06□□□□□ -2.42
ZCCHC3Q9NUD5 RNU6-918P-201ENST00000391219 106 ntBASIC-0.06□□□□□ -2.42
ZCCHC3Q9NUD5 AC244505.6-201ENST00000452829 130 ntBASIC-0.06□□□□□ -2.42
ZCCHC3Q9NUD5 RNU7-129P-201ENST00000516128 62 ntBASIC-0.06□□□□□ -2.42
ZCCHC3Q9NUD5 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.06□□□□□ -2.42
ZCCHC3Q9NUD5 AL359881.1-201ENST00000602916 267 ntBASIC-0.06□□□□□ -2.42
ZCCHC3Q9NUD5 RNU1-29P-201ENST00000606574 126 ntBASIC-0.06□□□□□ -2.42
ZCCHC3Q9NUD5 MIR330-201ENST00000362196 94 ntBASIC-0.07□□□□□ -2.42
ZCCHC3Q9NUD5 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.07□□□□□ -2.42
ZCCHC3Q9NUD5 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.07□□□□□ -2.42
ZCCHC3Q9NUD5 SNORD115-24-201ENST00000363528 82 ntBASIC-0.07□□□□□ -2.42
ZCCHC3Q9NUD5 MIR568-201ENST00000385036 95 ntBASIC-0.07□□□□□ -2.42
ZCCHC3Q9NUD5 MIR610-201ENST00000385139 96 ntBASIC-0.07□□□□□ -2.42
ZCCHC3Q9NUD5 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
ZCCHC3Q9NUD5 MIR1197-201ENST00000408818 88 ntBASIC-0.07□□□□□ -2.42
ZCCHC3Q9NUD5 RNU2-35P-201ENST00000516446 142 ntBASIC-0.07□□□□□ -2.42
ZCCHC3Q9NUD5 MIR4752-201ENST00000579672 72 ntBASIC-0.07□□□□□ -2.42
ZCCHC3Q9NUD5 MIR3149-201ENST00000584629 83 ntBASIC-0.07□□□□□ -2.42
ZCCHC3Q9NUD5 RNU6-726P-201ENST00000364680 107 ntBASIC-0.08□□□□□ -2.42
ZCCHC3Q9NUD5 RNU6-818P-201ENST00000364837 108 ntBASIC-0.08□□□□□ -2.42
ZCCHC3Q9NUD5 MIR145-201ENST00000384967 88 ntBASIC-0.08□□□□□ -2.42
ZCCHC3Q9NUD5 MIR643-201ENST00000385267 97 ntBASIC-0.08□□□□□ -2.42
ZCCHC3Q9NUD5 RNA5SP63-201ENST00000391225 112 ntBASIC-0.08□□□□□ -2.42
ZCCHC3Q9NUD5 MIR1302-3-201ENST00000408128 138 ntBASIC-0.08□□□□□ -2.42
ZCCHC3Q9NUD5 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.08□□□□□ -2.42
ZCCHC3Q9NUD5 MIR3128-201ENST00000581957 66 ntBASIC-0.08□□□□□ -2.42
ZCCHC3Q9NUD5 MIR8087-201ENST00000612745 78 ntBASIC-0.08□□□□□ -2.42
ZCCHC3Q9NUD5 RNU6-929P-201ENST00000384429 107 ntBASIC-0.09□□□□□ -2.42
ZCCHC3Q9NUD5 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.09□□□□□ -2.42
ZCCHC3Q9NUD5 MIR593-201ENST00000384856 100 ntBASIC-0.09□□□□□ -2.42
ZCCHC3Q9NUD5 RPL39P34-201ENST00000477141 156 ntBASIC-0.09□□□□□ -2.42
ZCCHC3Q9NUD5 AC138869.1-201ENST00000568623 124 ntBASIC-0.09□□□□□ -2.42
ZCCHC3Q9NUD5 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.09□□□□□ -2.42
ZCCHC3Q9NUD5 RNU6-161P-201ENST00000363051 106 ntBASIC-0.1□□□□□ -2.43
ZCCHC3Q9NUD5 SNORA32.1-201ENST00000364514 115 ntBASIC-0.1□□□□□ -2.43
ZCCHC3Q9NUD5 RNY1P2-201ENST00000364820 117 ntBASIC-0.1□□□□□ -2.43
ZCCHC3Q9NUD5 MTATP6P21-201ENST00000440681 189 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 213.4 ms