Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RPL39P25-201ENST00000449384 154 ntBASIC0.77□□□□□ -2.29
SIX2Q9NPC8 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.77□□□□□ -2.29
SIX2Q9NPC8 COX6CP6-201ENST00000490840 228 ntBASIC0.77□□□□□ -2.29
SIX2Q9NPC8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.77□□□□□ -2.29
SIX2Q9NPC8 UBL5P1-201ENST00000507979 193 ntBASIC0.77□□□□□ -2.29
SIX2Q9NPC8 RNU6-977P-201ENST00000516411 103 ntBASIC0.77□□□□□ -2.29
SIX2Q9NPC8 RNU6-1061P-201ENST00000516530 99 ntBASIC0.77□□□□□ -2.29
SIX2Q9NPC8 MIR4804-201ENST00000581683 73 ntBASIC0.77□□□□□ -2.29
SIX2Q9NPC8 MIR4661-201ENST00000582720 75 ntBASIC0.77□□□□□ -2.29
SIX2Q9NPC8 MIR1287-201ENST00000408492 90 ntBASIC0.76□□□□□ -2.29
SIX2Q9NPC8 RNU7-107P-201ENST00000459121 61 ntBASIC0.76□□□□□ -2.29
SIX2Q9NPC8 RNU6-1234P-201ENST00000516877 103 ntBASIC0.76□□□□□ -2.29
SIX2Q9NPC8 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.76□□□□□ -2.29
SIX2Q9NPC8 RMST_2.1-201ENST00000617263 136 ntBASIC0.76□□□□□ -2.29
SIX2Q9NPC8 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
SIX2Q9NPC8 Y_RNA.213-201ENST00000364178 111 ntBASIC0.75□□□□□ -2.29
SIX2Q9NPC8 RNU6-81P-201ENST00000365608 104 ntBASIC0.75□□□□□ -2.29
SIX2Q9NPC8 Y_RNA.528-201ENST00000384575 108 ntBASIC0.75□□□□□ -2.29
SIX2Q9NPC8 MIR520F-201ENST00000384824 87 ntBASIC0.75□□□□□ -2.29
SIX2Q9NPC8 SNORD105-201ENST00000386910 85 ntBASIC0.75□□□□□ -2.29
SIX2Q9NPC8 MIR938-201ENST00000401216 83 ntBASIC0.75□□□□□ -2.29
SIX2Q9NPC8 SNORD93-201ENST00000408813 74 ntBASIC0.75□□□□□ -2.29
SIX2Q9NPC8 SNORD67.1-201ENST00000516618 108 ntBASIC0.75□□□□□ -2.29
SIX2Q9NPC8 RNU7-137P-201ENST00000516788 62 ntBASIC0.75□□□□□ -2.29
SIX2Q9NPC8 AL359881.1-201ENST00000602916 267 ntBASIC0.75□□□□□ -2.29
SIX2Q9NPC8 AC025166.1-201ENST00000612411 163 ntBASIC0.75□□□□□ -2.29
SIX2Q9NPC8 MIR6504-201ENST00000613520 61 ntBASIC0.75□□□□□ -2.29
SIX2Q9NPC8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.75□□□□□ -2.29
SIX2Q9NPC8 AL589743.1-201ENST00000551932 2712 ntBASIC0.74□□□□□ -2.29
SIX2Q9NPC8 Y_RNA.71-201ENST00000362892 104 ntBASIC0.74□□□□□ -2.29
SIX2Q9NPC8 Y_RNA.525-201ENST00000384570 113 ntBASIC0.74□□□□□ -2.29
SIX2Q9NPC8 RNU6-959P-201ENST00000384671 107 ntBASIC0.74□□□□□ -2.29
SIX2Q9NPC8 SNORD77B-201ENST00000391112 67 ntBASIC0.74□□□□□ -2.29
SIX2Q9NPC8 Y_RNA.588-201ENST00000391254 102 ntBASIC0.74□□□□□ -2.29
SIX2Q9NPC8 Y_RNA.630-201ENST00000411370 108 ntBASIC0.74□□□□□ -2.29
SIX2Q9NPC8 RNU7-56P-201ENST00000458744 62 ntBASIC0.74□□□□□ -2.29
SIX2Q9NPC8 RNU6-659P-201ENST00000516454 104 ntBASIC0.74□□□□□ -2.29
SIX2Q9NPC8 MIR3910-1-201ENST00000580936 111 ntBASIC0.74□□□□□ -2.29
SIX2Q9NPC8 MIR3163-201ENST00000581592 73 ntBASIC0.74□□□□□ -2.29
SIX2Q9NPC8 AC025627.3-201ENST00000582078 182 ntBASIC0.74□□□□□ -2.29
SIX2Q9NPC8 SNORD92-201ENST00000585078 85 ntBASIC0.74□□□□□ -2.29
SIX2Q9NPC8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SIX2Q9NPC8 AL157777.2-201ENST00000258070 137 ntBASIC0.73□□□□□ -2.29
SIX2Q9NPC8 SNORD114-10-201ENST00000363409 72 ntBASIC0.73□□□□□ -2.29
SIX2Q9NPC8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SIX2Q9NPC8 RNU6-735P-201ENST00000410612 107 ntBASIC0.73□□□□□ -2.29
SIX2Q9NPC8 RNU4-83P-201ENST00000410863 133 ntBASIC0.73□□□□□ -2.29
SIX2Q9NPC8 RNU7-102P-201ENST00000458948 62 ntBASIC0.73□□□□□ -2.29
SIX2Q9NPC8 Y_RNA.712-201ENST00000517011 92 ntBASIC0.73□□□□□ -2.29
SIX2Q9NPC8 RNU7-156P-201ENST00000517214 74 ntBASIC0.73□□□□□ -2.29
SIX2Q9NPC8 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.73□□□□□ -2.29
SIX2Q9NPC8 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SIX2Q9NPC8 MTND5P18-201ENST00000445624 1801 ntBASIC0.73□□□□□ -2.29
SIX2Q9NPC8 Y_RNA.346-201ENST00000365385 112 ntBASIC0.72□□□□□ -2.29
SIX2Q9NPC8 SNORD116-14-201ENST00000383894 92 ntBASIC0.72□□□□□ -2.29
SIX2Q9NPC8 SNORD116-17-201ENST00000383929 92 ntBASIC0.72□□□□□ -2.29
SIX2Q9NPC8 RNU6-364P-201ENST00000384387 107 ntBASIC0.72□□□□□ -2.29
SIX2Q9NPC8 SNORD116-15-201ENST00000384445 92 ntBASIC0.72□□□□□ -2.29
SIX2Q9NPC8 SNORD116-19-201ENST00000384729 92 ntBASIC0.72□□□□□ -2.29
SIX2Q9NPC8 MIR520H-201ENST00000385126 88 ntBASIC0.72□□□□□ -2.29
SIX2Q9NPC8 MIR759-201ENST00000390224 91 ntBASIC0.72□□□□□ -2.29
SIX2Q9NPC8 SNORD99-201ENST00000408612 74 ntBASIC0.72□□□□□ -2.29
SIX2Q9NPC8 RNU7-6P-201ENST00000516845 62 ntBASIC0.72□□□□□ -2.29
SIX2Q9NPC8 MIR4491-201ENST00000581087 68 ntBASIC0.72□□□□□ -2.29
SIX2Q9NPC8 AC008608.1-201ENST00000603910 127 ntBASIC0.72□□□□□ -2.29
SIX2Q9NPC8 MIR8066-201ENST00000617280 78 ntBASIC0.72□□□□□ -2.29
SIX2Q9NPC8 AC087741.2-201ENST00000619415 172 ntBASIC0.72□□□□□ -2.29
SIX2Q9NPC8 MIR3914-2-201ENST00000637339 95 ntBASIC0.72□□□□□ -2.29
SIX2Q9NPC8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
SIX2Q9NPC8 Y_RNA.42-201ENST00000362660 108 ntBASIC0.71□□□□□ -2.3
SIX2Q9NPC8 SNORD115-19-201ENST00000363098 82 ntBASIC0.71□□□□□ -2.3
SIX2Q9NPC8 SNORD115-18-201ENST00000363293 82 ntBASIC0.71□□□□□ -2.3
SIX2Q9NPC8 SNORD115-17-201ENST00000364612 82 ntBASIC0.71□□□□□ -2.3
SIX2Q9NPC8 RNU6-616P-201ENST00000384353 107 ntBASIC0.71□□□□□ -2.3
SIX2Q9NPC8 MIR520E-201ENST00000384867 87 ntBASIC0.71□□□□□ -2.3
SIX2Q9NPC8 MIR206-201ENST00000384872 86 ntBASIC0.71□□□□□ -2.3
SIX2Q9NPC8 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
SIX2Q9NPC8 RNU1-119P-201ENST00000391122 165 ntBASIC0.71□□□□□ -2.3
SIX2Q9NPC8 AL353765.1-201ENST00000605514 183 ntBASIC0.71□□□□□ -2.3
SIX2Q9NPC8 RNU6-403P-201ENST00000363163 104 ntBASIC0.7□□□□□ -2.3
SIX2Q9NPC8 Y_RNA.127-201ENST00000363386 109 ntBASIC0.7□□□□□ -2.3
SIX2Q9NPC8 Y_RNA.191-201ENST00000363972 113 ntBASIC0.7□□□□□ -2.3
SIX2Q9NPC8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SIX2Q9NPC8 MIR608-201ENST00000384820 100 ntBASIC0.7□□□□□ -2.3
SIX2Q9NPC8 MIR605-201ENST00000385078 83 ntBASIC0.7□□□□□ -2.3
SIX2Q9NPC8 RNU6-447P-201ENST00000410293 104 ntBASIC0.7□□□□□ -2.3
SIX2Q9NPC8 RNU6-1118P-201ENST00000410382 104 ntBASIC0.7□□□□□ -2.3
SIX2Q9NPC8 RNU6-1076P-201ENST00000410397 104 ntBASIC0.7□□□□□ -2.3
SIX2Q9NPC8 RNU6-355P-201ENST00000410427 104 ntBASIC0.7□□□□□ -2.3
SIX2Q9NPC8 RNU6-791P-201ENST00000410467 104 ntBASIC0.7□□□□□ -2.3
SIX2Q9NPC8 RNU6-705P-201ENST00000410601 104 ntBASIC0.7□□□□□ -2.3
SIX2Q9NPC8 RNU6-1100P-201ENST00000410691 104 ntBASIC0.7□□□□□ -2.3
SIX2Q9NPC8 RNU6-860P-201ENST00000410860 104 ntBASIC0.7□□□□□ -2.3
SIX2Q9NPC8 RNU6-1217P-201ENST00000411276 104 ntBASIC0.7□□□□□ -2.3
SIX2Q9NPC8 RNU6-785P-201ENST00000411324 104 ntBASIC0.7□□□□□ -2.3
SIX2Q9NPC8 U6.90-201ENST00000614007 104 ntBASIC0.7□□□□□ -2.3
SIX2Q9NPC8 AC105081.1-201ENST00000617727 106 ntBASIC0.7□□□□□ -2.3
SIX2Q9NPC8 U6.70-201ENST00000620287 104 ntBASIC0.7□□□□□ -2.3
SIX2Q9NPC8 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
SIX2Q9NPC8 AC132825.6-201ENST00000638861 357 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 211 ms