Protein–RNA interactions for Protein: Q9NP61

ARFGAP3, ADP-ribosylation factor GTPase-activating protein 3, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3Q9NP61 Y_RNA.398-201ENST00000383952 99 ntBASIC0.75□□□□□ -2.29
ARFGAP3Q9NP61 Y_RNA.400-201ENST00000383963 111 ntBASIC0.75□□□□□ -2.29
ARFGAP3Q9NP61 RNU6-42P-201ENST00000384165 107 ntBASIC0.75□□□□□ -2.29
ARFGAP3Q9NP61 Y_RNA.464-201ENST00000384282 110 ntBASIC0.75□□□□□ -2.29
ARFGAP3Q9NP61 Y_RNA.588-201ENST00000391254 102 ntBASIC0.75□□□□□ -2.29
ARFGAP3Q9NP61 SNORD100-201ENST00000408573 76 ntBASIC0.75□□□□□ -2.29
ARFGAP3Q9NP61 AC096949.1-201ENST00000412047 152 ntBASIC0.75□□□□□ -2.29
ARFGAP3Q9NP61 AC002350.1-201ENST00000490759 375 ntBASIC0.75□□□□□ -2.29
ARFGAP3Q9NP61 RNU7-123P-201ENST00000515911 60 ntBASIC0.75□□□□□ -2.29
ARFGAP3Q9NP61 SNORA25.12-201ENST00000516202 82 ntBASIC0.75□□□□□ -2.29
ARFGAP3Q9NP61 RNU6-448P-201ENST00000517052 107 ntBASIC0.75□□□□□ -2.29
ARFGAP3Q9NP61 MIR548X2-201ENST00000579776 100 ntBASIC0.75□□□□□ -2.29
ARFGAP3Q9NP61 MIR4491-201ENST00000581087 68 ntBASIC0.75□□□□□ -2.29
ARFGAP3Q9NP61 MIR6788-201ENST00000618842 66 ntBASIC0.75□□□□□ -2.29
ARFGAP3Q9NP61 SNORA72.6-201ENST00000384520 129 ntBASIC0.74□□□□□ -2.29
ARFGAP3Q9NP61 MIR151B-201ENST00000584249 96 ntBASIC0.74□□□□□ -2.29
ARFGAP3Q9NP61 Y_RNA.118-201ENST00000363300 101 ntBASIC0.73□□□□□ -2.29
ARFGAP3Q9NP61 RNU6-915P-201ENST00000364943 103 ntBASIC0.73□□□□□ -2.29
ARFGAP3Q9NP61 RNU4-45P-201ENST00000365469 141 ntBASIC0.73□□□□□ -2.29
ARFGAP3Q9NP61 MIR140-201ENST00000385282 100 ntBASIC0.73□□□□□ -2.29
ARFGAP3Q9NP61 Y_RNA.692-201ENST00000516627 105 ntBASIC0.73□□□□□ -2.29
ARFGAP3Q9NP61 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.73□□□□□ -2.29
ARFGAP3Q9NP61 MIR6082-201ENST00000613604 109 ntBASIC0.73□□□□□ -2.29
ARFGAP3Q9NP61 MIR6734-201ENST00000621166 68 ntBASIC0.73□□□□□ -2.29
ARFGAP3Q9NP61 MIR6835-201ENST00000621552 64 ntBASIC0.73□□□□□ -2.29
ARFGAP3Q9NP61 HSBP1P2-201ENST00000299671 229 ntBASIC0.72□□□□□ -2.29
ARFGAP3Q9NP61 Y_RNA.215-201ENST00000364204 112 ntBASIC0.72□□□□□ -2.29
ARFGAP3Q9NP61 Y_RNA.298-201ENST00000364960 107 ntBASIC0.72□□□□□ -2.29
ARFGAP3Q9NP61 Y_RNA.617-201ENST00000410920 90 ntBASIC0.72□□□□□ -2.29
ARFGAP3Q9NP61 AC004941.2-201ENST00000427009 228 ntBASIC0.72□□□□□ -2.29
ARFGAP3Q9NP61 AC108081.1-201ENST00000604358 221 ntBASIC0.72□□□□□ -2.29
ARFGAP3Q9NP61 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
ARFGAP3Q9NP61 RNA5SP117-201ENST00000365294 118 ntBASIC0.71□□□□□ -2.3
ARFGAP3Q9NP61 MIR508-201ENST00000384857 115 ntBASIC0.71□□□□□ -2.3
ARFGAP3Q9NP61 RNU6-1212P-201ENST00000517023 104 ntBASIC0.71□□□□□ -2.3
ARFGAP3Q9NP61 RNU6-1223P-201ENST00000517124 104 ntBASIC0.71□□□□□ -2.3
ARFGAP3Q9NP61 MIR4714-201ENST00000580728 77 ntBASIC0.71□□□□□ -2.3
ARFGAP3Q9NP61 AL590095.2-201ENST00000604136 117 ntBASIC0.71□□□□□ -2.3
ARFGAP3Q9NP61 AL137067.1-201ENST00000615933 120 ntBASIC0.71□□□□□ -2.3
ARFGAP3Q9NP61 AP001340.1-201ENST00000624405 217 ntBASIC0.71□□□□□ -2.3
ARFGAP3Q9NP61 Y_RNA.299-201ENST00000364973 94 ntBASIC0.7□□□□□ -2.3
ARFGAP3Q9NP61 RNU6-945P-201ENST00000383947 107 ntBASIC0.7□□□□□ -2.3
ARFGAP3Q9NP61 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
ARFGAP3Q9NP61 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.7□□□□□ -2.3
ARFGAP3Q9NP61 MTND5P41-201ENST00000517498 206 ntBASIC0.7□□□□□ -2.3
ARFGAP3Q9NP61 AP001328.1-201ENST00000528550 176 ntBASIC0.7□□□□□ -2.3
ARFGAP3Q9NP61 AP003327.1-201ENST00000529684 127 ntBASIC0.7□□□□□ -2.3
ARFGAP3Q9NP61 AC021753.1-201ENST00000635724 168 ntBASIC0.7□□□□□ -2.3
ARFGAP3Q9NP61 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.69□□□□□ -2.3
ARFGAP3Q9NP61 RNA5SP436-201ENST00000516020 115 ntBASIC0.69□□□□□ -2.3
ARFGAP3Q9NP61 RNU4-54P-201ENST00000516428 129 ntBASIC0.69□□□□□ -2.3
ARFGAP3Q9NP61 SNORD67.1-201ENST00000516618 108 ntBASIC0.69□□□□□ -2.3
ARFGAP3Q9NP61 RNY4P20-201ENST00000516678 93 ntBASIC0.69□□□□□ -2.3
ARFGAP3Q9NP61 SNORA25.16-201ENST00000516741 121 ntBASIC0.69□□□□□ -2.3
ARFGAP3Q9NP61 RNU6-765P-201ENST00000516916 99 ntBASIC0.69□□□□□ -2.3
ARFGAP3Q9NP61 MIR3121-201ENST00000579680 77 ntBASIC0.69□□□□□ -2.3
ARFGAP3Q9NP61 Y_RNA.420-201ENST00000384043 110 ntBASIC0.68□□□□□ -2.3
ARFGAP3Q9NP61 Y_RNA.488-201ENST00000384403 102 ntBASIC0.68□□□□□ -2.3
ARFGAP3Q9NP61 RNU4-69P-201ENST00000410677 143 ntBASIC0.68□□□□□ -2.3
ARFGAP3Q9NP61 RNA5SP121-201ENST00000516537 101 ntBASIC0.68□□□□□ -2.3
ARFGAP3Q9NP61 RNU7-137P-201ENST00000516788 62 ntBASIC0.68□□□□□ -2.3
ARFGAP3Q9NP61 AC133485.1-201ENST00000567176 124 ntBASIC0.68□□□□□ -2.3
ARFGAP3Q9NP61 AC138907.6-201ENST00000568401 126 ntBASIC0.68□□□□□ -2.3
ARFGAP3Q9NP61 MIR569-201ENST00000385228 96 ntBASIC0.67□□□□□ -2.3
ARFGAP3Q9NP61 RNU6-907P-201ENST00000390924 102 ntBASIC0.67□□□□□ -2.3
ARFGAP3Q9NP61 RNU6-679P-201ENST00000391003 106 ntBASIC0.67□□□□□ -2.3
ARFGAP3Q9NP61 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.67□□□□□ -2.3
ARFGAP3Q9NP61 RNU7-200P-201ENST00000516105 62 ntBASIC0.67□□□□□ -2.3
ARFGAP3Q9NP61 DEFB131E-201ENST00000532329 154 ntBASIC0.67□□□□□ -2.3
ARFGAP3Q9NP61 AC018659.1-201ENST00000551083 169 ntBASIC0.67□□□□□ -2.3
ARFGAP3Q9NP61 AC022523.2-201ENST00000561045 150 ntBASIC0.67□□□□□ -2.3
ARFGAP3Q9NP61 AL359881.1-201ENST00000602916 267 ntBASIC0.67□□□□□ -2.3
ARFGAP3Q9NP61 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.67□□□□□ -2.3
ARFGAP3Q9NP61 MIR92A1-201ENST00000385233 78 ntBASIC0.66□□□□□ -2.3
ARFGAP3Q9NP61 MIR1270-201ENST00000459320 83 ntBASIC0.66□□□□□ -2.3
ARFGAP3Q9NP61 MIR5000-201ENST00000577717 103 ntBASIC0.66□□□□□ -2.3
ARFGAP3Q9NP61 U7.2-201ENST00000607576 63 ntBASIC0.66□□□□□ -2.3
ARFGAP3Q9NP61 AC022709.1-201ENST00000615967 87 ntBASIC0.66□□□□□ -2.3
ARFGAP3Q9NP61 U6.109-201ENST00000636749 87 ntBASIC0.66□□□□□ -2.3
ARFGAP3Q9NP61 RNA5SP133-201ENST00000363368 119 ntBASIC0.65□□□□□ -2.31
ARFGAP3Q9NP61 Y_RNA.170-201ENST00000363746 110 ntBASIC0.65□□□□□ -2.31
ARFGAP3Q9NP61 RNU6-647P-201ENST00000364243 107 ntBASIC0.65□□□□□ -2.31
ARFGAP3Q9NP61 Y_RNA.697-201ENST00000516776 113 ntBASIC0.65□□□□□ -2.31
ARFGAP3Q9NP61 MIR3678-201ENST00000578455 94 ntBASIC0.65□□□□□ -2.31
ARFGAP3Q9NP61 AC105081.1-201ENST00000617727 106 ntBASIC0.65□□□□□ -2.31
ARFGAP3Q9NP61 SNORD114-10-201ENST00000363409 72 ntBASIC0.64□□□□□ -2.31
ARFGAP3Q9NP61 Y_RNA.343-201ENST00000365354 112 ntBASIC0.64□□□□□ -2.31
ARFGAP3Q9NP61 RNU6-209P-201ENST00000384118 107 ntBASIC0.64□□□□□ -2.31
ARFGAP3Q9NP61 SNORD77B-201ENST00000391112 67 ntBASIC0.64□□□□□ -2.31
ARFGAP3Q9NP61 MTND5P34-201ENST00000568888 325 ntBASIC0.64□□□□□ -2.31
ARFGAP3Q9NP61 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.64□□□□□ -2.31
ARFGAP3Q9NP61 MIR7111-201ENST00000619751 72 ntBASIC0.64□□□□□ -2.31
ARFGAP3Q9NP61 Y_RNA.114-201ENST00000363265 113 ntBASIC0.63□□□□□ -2.31
ARFGAP3Q9NP61 RNY1P5-201ENST00000383890 115 ntBASIC0.63□□□□□ -2.31
ARFGAP3Q9NP61 RNU6-1104P-201ENST00000384723 104 ntBASIC0.63□□□□□ -2.31
ARFGAP3Q9NP61 MIR489-201ENST00000384923 84 ntBASIC0.63□□□□□ -2.31
ARFGAP3Q9NP61 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
ARFGAP3Q9NP61 MIR548I1-201ENST00000408810 149 ntBASIC0.63□□□□□ -2.31
ARFGAP3Q9NP61 RNU6-733P-201ENST00000410759 104 ntBASIC0.63□□□□□ -2.31
ARFGAP3Q9NP61 RNU6-469P-201ENST00000516253 101 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 207.4 ms