Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 MIR6844-201ENST00000637122 62 ntBASIC0.35□□□□□ -2.35
NXF3Q9H4D5 SNORD115-2-201ENST00000362842 82 ntBASIC0.34□□□□□ -2.36
NXF3Q9H4D5 RNU6-200P-201ENST00000364743 107 ntBASIC0.34□□□□□ -2.36
NXF3Q9H4D5 RNY1P13-201ENST00000365030 105 ntBASIC0.34□□□□□ -2.36
NXF3Q9H4D5 SNORD115-20-201ENST00000365099 82 ntBASIC0.34□□□□□ -2.36
NXF3Q9H4D5 RNA5SP117-201ENST00000365294 118 ntBASIC0.34□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.357-201ENST00000365487 109 ntBASIC0.34□□□□□ -2.36
NXF3Q9H4D5 SNORA32-201ENST00000384072 121 ntBASIC0.34□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.497-201ENST00000384447 98 ntBASIC0.34□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.552-201ENST00000384665 112 ntBASIC0.34□□□□□ -2.36
NXF3Q9H4D5 MIR644A-201ENST00000385262 94 ntBASIC0.34□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.793-201ENST00000411222 111 ntBASIC0.34□□□□□ -2.36
NXF3Q9H4D5 AL512326.2-201ENST00000426359 151 ntBASIC0.34□□□□□ -2.36
NXF3Q9H4D5 MTATP6P21-201ENST00000440681 189 ntBASIC0.34□□□□□ -2.36
NXF3Q9H4D5 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
NXF3Q9H4D5 SNORA25.16-201ENST00000516741 121 ntBASIC0.34□□□□□ -2.36
NXF3Q9H4D5 AP002392.1-201ENST00000537692 208 ntBASIC0.34□□□□□ -2.36
NXF3Q9H4D5 MIR6082-201ENST00000613604 109 ntBASIC0.34□□□□□ -2.36
NXF3Q9H4D5 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.34□□□□□ -2.36
NXF3Q9H4D5 AC090625.1-201ENST00000357130 210 ntBASIC0.33□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.240-201ENST00000364469 95 ntBASIC0.33□□□□□ -2.36
NXF3Q9H4D5 RNA5SP517-201ENST00000364724 117 ntBASIC0.33□□□□□ -2.36
NXF3Q9H4D5 RNU6-1318P-201ENST00000365389 103 ntBASIC0.33□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.476-201ENST00000384347 108 ntBASIC0.33□□□□□ -2.36
NXF3Q9H4D5 SNORA72.6-201ENST00000384520 129 ntBASIC0.33□□□□□ -2.36
NXF3Q9H4D5 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.33□□□□□ -2.36
NXF3Q9H4D5 AL022718.1-201ENST00000412004 84 ntBASIC0.33□□□□□ -2.36
NXF3Q9H4D5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.33□□□□□ -2.36
NXF3Q9H4D5 AC074198.2-201ENST00000508153 258 ntBASIC0.33□□□□□ -2.36
NXF3Q9H4D5 RNU6-138P-201ENST00000515952 107 ntBASIC0.33□□□□□ -2.36
NXF3Q9H4D5 RNU6-861P-201ENST00000516745 106 ntBASIC0.33□□□□□ -2.36
NXF3Q9H4D5 AC133485.4-201ENST00000561835 220 ntBASIC0.33□□□□□ -2.36
NXF3Q9H4D5 MTND5P34-201ENST00000568888 325 ntBASIC0.33□□□□□ -2.36
NXF3Q9H4D5 MIR4491-201ENST00000581087 68 ntBASIC0.33□□□□□ -2.36
NXF3Q9H4D5 MIR924-201ENST00000638017 53 ntBASIC0.33□□□□□ -2.36
NXF3Q9H4D5 MIR330-201ENST00000362196 94 ntBASIC0.32□□□□□ -2.36
NXF3Q9H4D5 RNA5SP325-201ENST00000363756 130 ntBASIC0.32□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.258-201ENST00000364613 105 ntBASIC0.32□□□□□ -2.36
NXF3Q9H4D5 RNU7-113P-201ENST00000459273 62 ntBASIC0.32□□□□□ -2.36
NXF3Q9H4D5 RNU7-120P-201ENST00000459334 63 ntBASIC0.32□□□□□ -2.36
NXF3Q9H4D5 RNU7-79P-201ENST00000516082 62 ntBASIC0.32□□□□□ -2.36
NXF3Q9H4D5 RNU6-240P-201ENST00000516098 97 ntBASIC0.32□□□□□ -2.36
NXF3Q9H4D5 RNU2-35P-201ENST00000516446 142 ntBASIC0.32□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.686-201ENST00000516548 134 ntBASIC0.32□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.700-201ENST00000516806 100 ntBASIC0.32□□□□□ -2.36
NXF3Q9H4D5 RNU7-35P-201ENST00000517174 62 ntBASIC0.32□□□□□ -2.36
NXF3Q9H4D5 MIR3678-201ENST00000578455 94 ntBASIC0.32□□□□□ -2.36
NXF3Q9H4D5 SNORA25.18-201ENST00000607153 114 ntBASIC0.32□□□□□ -2.36
NXF3Q9H4D5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.32□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.120-201ENST00000363304 110 ntBASIC0.31□□□□□ -2.36
NXF3Q9H4D5 RNU6-690P-201ENST00000365242 106 ntBASIC0.31□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.441-201ENST00000384123 112 ntBASIC0.31□□□□□ -2.36
NXF3Q9H4D5 snosnR66.1-201ENST00000391095 99 ntBASIC0.31□□□□□ -2.36
NXF3Q9H4D5 RNU6-1135P-201ENST00000411083 103 ntBASIC0.31□□□□□ -2.36
NXF3Q9H4D5 MIR1270-201ENST00000459320 83 ntBASIC0.31□□□□□ -2.36
NXF3Q9H4D5 RNA5SP94-201ENST00000516917 108 ntBASIC0.31□□□□□ -2.36
NXF3Q9H4D5 DNAJC19P2-201ENST00000593340 302 ntBASIC0.31□□□□□ -2.36
NXF3Q9H4D5 AC092634.7-201ENST00000621022 103 ntBASIC0.31□□□□□ -2.36
NXF3Q9H4D5 MIR103A1-201ENST00000362165 78 ntBASIC0.3□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.32-201ENST00000362589 110 ntBASIC0.3□□□□□ -2.36
NXF3Q9H4D5 RNU6-682P-201ENST00000363843 106 ntBASIC0.3□□□□□ -2.36
NXF3Q9H4D5 RNU6-309P-201ENST00000364573 106 ntBASIC0.3□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.531-201ENST00000384589 121 ntBASIC0.3□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.651-201ENST00000459380 103 ntBASIC0.3□□□□□ -2.36
NXF3Q9H4D5 RNA5SP33-201ENST00000516687 98 ntBASIC0.3□□□□□ -2.36
NXF3Q9H4D5 RNA5SP330-201ENST00000517096 96 ntBASIC0.3□□□□□ -2.36
NXF3Q9H4D5 MIR4514-201ENST00000581410 57 ntBASIC0.3□□□□□ -2.36
NXF3Q9H4D5 MIR4305-201ENST00000583252 102 ntBASIC0.3□□□□□ -2.36
NXF3Q9H4D5 MIR548AE2-201ENST00000583456 67 ntBASIC0.3□□□□□ -2.36
NXF3Q9H4D5 AL359881.1-201ENST00000602916 267 ntBASIC0.3□□□□□ -2.36
NXF3Q9H4D5 AC105081.1-201ENST00000617727 106 ntBASIC0.3□□□□□ -2.36
NXF3Q9H4D5 SNORA36.1-201ENST00000363424 132 ntBASIC0.29□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.174-201ENST00000363781 105 ntBASIC0.29□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.785-201ENST00000384290 109 ntBASIC0.29□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.567-201ENST00000384736 106 ntBASIC0.29□□□□□ -2.36
NXF3Q9H4D5 SNORA40.8-201ENST00000411034 126 ntBASIC0.29□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.662-201ENST00000516028 97 ntBASIC0.29□□□□□ -2.36
NXF3Q9H4D5 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
NXF3Q9H4D5 SNORA31.14-201ENST00000516728 116 ntBASIC0.29□□□□□ -2.36
NXF3Q9H4D5 uc_338.16-201ENST00000621804 95 ntBASIC0.29□□□□□ -2.36
NXF3Q9H4D5 MIRLET7D-201ENST00000362263 87 ntBASIC0.28□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.29-201ENST00000362570 113 ntBASIC0.28□□□□□ -2.36
NXF3Q9H4D5 RNA5SP245-201ENST00000364239 121 ntBASIC0.28□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.366-201ENST00000365540 102 ntBASIC0.28□□□□□ -2.36
NXF3Q9H4D5 RNU6-291P-201ENST00000384720 107 ntBASIC0.28□□□□□ -2.36
NXF3Q9H4D5 MIR518A1-201ENST00000385068 85 ntBASIC0.28□□□□□ -2.36
NXF3Q9H4D5 SNORD37.2-201ENST00000391075 66 ntBASIC0.28□□□□□ -2.36
NXF3Q9H4D5 Y_RNA.584-201ENST00000391090 114 ntBASIC0.28□□□□□ -2.36
NXF3Q9H4D5 RNU6-1194P-201ENST00000516208 104 ntBASIC0.28□□□□□ -2.36
NXF3Q9H4D5 SNORD67.1-201ENST00000516618 108 ntBASIC0.28□□□□□ -2.36
NXF3Q9H4D5 RNU6-531P-201ENST00000516694 104 ntBASIC0.28□□□□□ -2.36
NXF3Q9H4D5 AC022523.2-201ENST00000561045 150 ntBASIC0.28□□□□□ -2.36
NXF3Q9H4D5 AC138907.4-201ENST00000570107 226 ntBASIC0.28□□□□□ -2.36
NXF3Q9H4D5 AC108081.1-201ENST00000604358 221 ntBASIC0.28□□□□□ -2.36
NXF3Q9H4D5 MIR8087-201ENST00000612745 78 ntBASIC0.28□□□□□ -2.36
NXF3Q9H4D5 RNA5SP133-201ENST00000363368 119 ntBASIC0.27□□□□□ -2.37
NXF3Q9H4D5 SNORA63.5-201ENST00000363548 123 ntBASIC0.27□□□□□ -2.37
NXF3Q9H4D5 Y_RNA.251-201ENST00000364551 99 ntBASIC0.27□□□□□ -2.37
NXF3Q9H4D5 Y_RNA.257-201ENST00000364596 102 ntBASIC0.27□□□□□ -2.37
NXF3Q9H4D5 SNORD18B-201ENST00000365659 72 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms