Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 PRELID3BP2-201ENST00000605362 201 ntBASIC2.48□□□□□ -2.01
NUCKS1Q9H1E3 AC008163.1-202ENST00000636004 2889 ntBASIC2.47□□□□□ -2.01
NUCKS1Q9H1E3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
NUCKS1Q9H1E3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
NUCKS1Q9H1E3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
NUCKS1Q9H1E3 SNORD36A-201ENST00000362874 73 ntBASIC2.47□□□□□ -2.01
NUCKS1Q9H1E3 RNA5SP48-201ENST00000363969 126 ntBASIC2.47□□□□□ -2.01
NUCKS1Q9H1E3 RNU6-360P-201ENST00000390944 104 ntBASIC2.47□□□□□ -2.01
NUCKS1Q9H1E3 SNORD23.1-201ENST00000408212 104 ntBASIC2.47□□□□□ -2.01
NUCKS1Q9H1E3 HSPE1P24-201ENST00000450782 238 ntBASIC2.47□□□□□ -2.01
NUCKS1Q9H1E3 AC104435.1-201ENST00000483483 166 ntBASIC2.47□□□□□ -2.01
NUCKS1Q9H1E3 AC008413.1-201ENST00000511864 177 ntBASIC2.47□□□□□ -2.01
NUCKS1Q9H1E3 RNU6-322P-201ENST00000516010 103 ntBASIC2.47□□□□□ -2.01
NUCKS1Q9H1E3 SNORD111.1-201ENST00000516421 86 ntBASIC2.47□□□□□ -2.01
NUCKS1Q9H1E3 DEFB122-202ENST00000569013 197 ntBASIC2.47□□□□□ -2.01
NUCKS1Q9H1E3 MIR4484-201ENST00000582855 83 ntBASIC2.47□□□□□ -2.01
NUCKS1Q9H1E3 U1.36-201ENST00000620684 176 ntBASIC2.47□□□□□ -2.01
NUCKS1Q9H1E3 RNU6-132P-201ENST00000383863 107 ntBASIC2.46□□□□□ -2.02
NUCKS1Q9H1E3 MIR516A2-201ENST00000384888 90 ntBASIC2.46□□□□□ -2.02
NUCKS1Q9H1E3 MIR516A1-201ENST00000385033 90 ntBASIC2.46□□□□□ -2.02
NUCKS1Q9H1E3 MIR520H-201ENST00000385126 88 ntBASIC2.46□□□□□ -2.02
NUCKS1Q9H1E3 SNORA11.2-201ENST00000408318 127 ntBASIC2.46□□□□□ -2.02
NUCKS1Q9H1E3 AL356379.1-201ENST00000414105 126 ntBASIC2.46□□□□□ -2.02
NUCKS1Q9H1E3 RNU6-75P-201ENST00000515944 104 ntBASIC2.46□□□□□ -2.02
NUCKS1Q9H1E3 MIR3064-201ENST00000581130 66 ntBASIC2.46□□□□□ -2.02
NUCKS1Q9H1E3 MIR4435-1-201ENST00000582552 80 ntBASIC2.46□□□□□ -2.02
NUCKS1Q9H1E3 SNORA4-201ENST00000584302 138 ntBASIC2.46□□□□□ -2.02
NUCKS1Q9H1E3 MIR4448-201ENST00000584360 86 ntBASIC2.46□□□□□ -2.02
NUCKS1Q9H1E3 AC104996.3-201ENST00000590718 94 ntBASIC2.46□□□□□ -2.02
NUCKS1Q9H1E3 AL161722.3-201ENST00000605789 2983 ntBASIC2.46□□□□□ -2.02
NUCKS1Q9H1E3 MIR6740-201ENST00000618268 113 ntBASIC2.46□□□□□ -2.02
NUCKS1Q9H1E3 SNORA3A-201ENST00000364113 130 ntBASIC2.45□□□□□ -2.02
NUCKS1Q9H1E3 MIR194-1-201ENST00000384892 85 ntBASIC2.45□□□□□ -2.02
NUCKS1Q9H1E3 AC125388.1-201ENST00000459631 156 ntBASIC2.45□□□□□ -2.02
NUCKS1Q9H1E3 AP000942.3-201ENST00000603702 160 ntBASIC2.45□□□□□ -2.02
NUCKS1Q9H1E3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NUCKS1Q9H1E3 MIR30D-201ENST00000362283 70 ntBASIC2.44□□□□□ -2.02
NUCKS1Q9H1E3 Y_RNA.283-201ENST00000364798 112 ntBASIC2.44□□□□□ -2.02
NUCKS1Q9H1E3 Y_RNA.340-201ENST00000365330 92 ntBASIC2.44□□□□□ -2.02
NUCKS1Q9H1E3 SNORD77.2-201ENST00000391045 68 ntBASIC2.44□□□□□ -2.02
NUCKS1Q9H1E3 RNU6-1254P-201ENST00000391266 104 ntBASIC2.44□□□□□ -2.02
NUCKS1Q9H1E3 RNA5SP508-201ENST00000411327 119 ntBASIC2.44□□□□□ -2.02
NUCKS1Q9H1E3 AC004965.1-201ENST00000413033 213 ntBASIC2.44□□□□□ -2.02
NUCKS1Q9H1E3 RNU6-70P-201ENST00000516438 60 ntBASIC2.44□□□□□ -2.02
NUCKS1Q9H1E3 RNU6-807P-201ENST00000516805 107 ntBASIC2.44□□□□□ -2.02
NUCKS1Q9H1E3 AC131280.1-202ENST00000624067 4211 ntBASIC2.44□□□□□ -2.02
NUCKS1Q9H1E3 RNA5SP37-201ENST00000365420 130 ntBASIC2.43□□□□□ -2.02
NUCKS1Q9H1E3 SNORA48.3-201ENST00000391081 134 ntBASIC2.43□□□□□ -2.02
NUCKS1Q9H1E3 MIR1302-7-201ENST00000408841 72 ntBASIC2.43□□□□□ -2.02
NUCKS1Q9H1E3 RNU4-53P-201ENST00000410828 140 ntBASIC2.43□□□□□ -2.02
NUCKS1Q9H1E3 RNU6-687P-201ENST00000516443 89 ntBASIC2.43□□□□□ -2.02
NUCKS1Q9H1E3 MIR3192-201ENST00000584920 77 ntBASIC2.43□□□□□ -2.02
NUCKS1Q9H1E3 AL096861.1-201ENST00000610899 123 ntBASIC2.43□□□□□ -2.02
NUCKS1Q9H1E3 MIR1297-201ENST00000637311 77 ntBASIC2.43□□□□□ -2.02
NUCKS1Q9H1E3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
NUCKS1Q9H1E3 Y_RNA.491-201ENST00000384417 107 ntBASIC2.42□□□□□ -2.02
NUCKS1Q9H1E3 MIR17-201ENST00000385012 84 ntBASIC2.42□□□□□ -2.02
NUCKS1Q9H1E3 RNU6-243P-201ENST00000391140 107 ntBASIC2.42□□□□□ -2.02
NUCKS1Q9H1E3 RNU6-634P-201ENST00000459134 106 ntBASIC2.42□□□□□ -2.02
NUCKS1Q9H1E3 Y_RNA.681-201ENST00000516445 113 ntBASIC2.42□□□□□ -2.02
NUCKS1Q9H1E3 AL357312.1-201ENST00000603879 298 ntBASIC2.42□□□□□ -2.02
NUCKS1Q9H1E3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
NUCKS1Q9H1E3 SNORD41-201ENST00000386967 70 ntBASIC2.41□□□□□ -2.02
NUCKS1Q9H1E3 MIR1265-201ENST00000408444 86 ntBASIC2.41□□□□□ -2.02
NUCKS1Q9H1E3 RNA5SP450-201ENST00000411206 102 ntBASIC2.41□□□□□ -2.02
NUCKS1Q9H1E3 RNA5SP270-201ENST00000411361 118 ntBASIC2.41□□□□□ -2.02
NUCKS1Q9H1E3 RNA5SP200-201ENST00000516360 103 ntBASIC2.41□□□□□ -2.02
NUCKS1Q9H1E3 SNORD92-201ENST00000585078 85 ntBASIC2.41□□□□□ -2.02
NUCKS1Q9H1E3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NUCKS1Q9H1E3 RNU6-208P-201ENST00000362431 107 ntBASIC2.4□□□□□ -2.03
NUCKS1Q9H1E3 Y_RNA.264-201ENST00000364665 102 ntBASIC2.4□□□□□ -2.03
NUCKS1Q9H1E3 MIR548U-201ENST00000390728 81 ntBASIC2.4□□□□□ -2.03
NUCKS1Q9H1E3 SNORA3.2-201ENST00000408221 125 ntBASIC2.4□□□□□ -2.03
NUCKS1Q9H1E3 RNU6-1165P-201ENST00000410119 107 ntBASIC2.4□□□□□ -2.03
NUCKS1Q9H1E3 MIR664A-201ENST00000626086 82 ntBASIC2.4□□□□□ -2.03
NUCKS1Q9H1E3 AP000553.5-201ENST00000641933 54 ntBASIC2.4□□□□□ -2.03
NUCKS1Q9H1E3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
NUCKS1Q9H1E3 MIRLET7F1-201ENST00000362202 87 ntBASIC2.39□□□□□ -2.03
NUCKS1Q9H1E3 RNU6-466P-201ENST00000391224 103 ntBASIC2.39□□□□□ -2.03
NUCKS1Q9H1E3 AC015818.7-201ENST00000428754 109 ntBASIC2.39□□□□□ -2.03
NUCKS1Q9H1E3 AC245517.4-201ENST00000448601 281 ntBASIC2.39□□□□□ -2.03
NUCKS1Q9H1E3 RNA5SP233-201ENST00000459153 113 ntBASIC2.39□□□□□ -2.03
NUCKS1Q9H1E3 RNU7-106P-201ENST00000459514 67 ntBASIC2.39□□□□□ -2.03
NUCKS1Q9H1E3 MIR4264-201ENST00000583520 66 ntBASIC2.39□□□□□ -2.03
NUCKS1Q9H1E3 MIR6132-201ENST00000622083 109 ntBASIC2.39□□□□□ -2.03
NUCKS1Q9H1E3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NUCKS1Q9H1E3 RNU6-396P-201ENST00000365369 105 ntBASIC2.38□□□□□ -2.03
NUCKS1Q9H1E3 Y_RNA.386-201ENST00000383913 105 ntBASIC2.38□□□□□ -2.03
NUCKS1Q9H1E3 SNORD90-201ENST00000391145 111 ntBASIC2.38□□□□□ -2.03
NUCKS1Q9H1E3 AC074348.1-201ENST00000426503 132 ntBASIC2.38□□□□□ -2.03
NUCKS1Q9H1E3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.38□□□□□ -2.03
NUCKS1Q9H1E3 RNU6-303P-201ENST00000517091 106 ntBASIC2.38□□□□□ -2.03
NUCKS1Q9H1E3 uc_338.6-201ENST00000613544 171 ntBASIC2.38□□□□□ -2.03
NUCKS1Q9H1E3 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.38□□□□□ -2.03
NUCKS1Q9H1E3 RNU5F-1-201ENST00000362507 117 ntBASIC2.37□□□□□ -2.03
NUCKS1Q9H1E3 SNORA25.3-201ENST00000363205 127 ntBASIC2.37□□□□□ -2.03
NUCKS1Q9H1E3 RNA5SP259-201ENST00000365541 109 ntBASIC2.37□□□□□ -2.03
NUCKS1Q9H1E3 RNU6-205P-201ENST00000390858 107 ntBASIC2.37□□□□□ -2.03
NUCKS1Q9H1E3 RNU6-587P-201ENST00000391282 106 ntBASIC2.37□□□□□ -2.03
NUCKS1Q9H1E3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 235.9 ms