Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.49□□□□□ -2.33
RSPO3Q9BXY4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.49□□□□□ -2.33
RSPO3Q9BXY4 MIR1-1-201ENST00000362147 71 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 Y_RNA.215-201ENST00000364204 112 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 Y_RNA.294-201ENST00000364916 102 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 Y_RNA.366-201ENST00000365540 102 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 Y_RNA.400-201ENST00000383963 111 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 Y_RNA.464-201ENST00000384282 110 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 SNORA18-201ENST00000384416 132 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 Y_RNA.506-201ENST00000384494 102 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 U8.15-201ENST00000390947 134 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 AL603914.1-201ENST00000401964 204 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 RNA5SP261-201ENST00000410536 106 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 MIR18B-201ENST00000454574 71 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 RNU7-185P-201ENST00000459215 60 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 SNORA25.12-201ENST00000516202 82 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 RNU6-229P-201ENST00000516614 102 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 RNU6-1212P-201ENST00000517023 104 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 AC141846.1-201ENST00000568348 142 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 MIR548X2-201ENST00000579776 100 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 MIR4804-201ENST00000581683 73 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 MIR3668-201ENST00000582138 75 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 AC008608.1-201ENST00000603910 127 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 AL662814.1-201ENST00000617364 121 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 AC243829.3-201ENST00000622177 108 ntBASIC0.48□□□□□ -2.33
RSPO3Q9BXY4 SNORD115-2-201ENST00000362842 82 ntBASIC0.47□□□□□ -2.33
RSPO3Q9BXY4 RNY1P13-201ENST00000365030 105 ntBASIC0.47□□□□□ -2.33
RSPO3Q9BXY4 SNORD115-20-201ENST00000365099 82 ntBASIC0.47□□□□□ -2.33
RSPO3Q9BXY4 RNU6-690P-201ENST00000365242 106 ntBASIC0.47□□□□□ -2.33
RSPO3Q9BXY4 RNU6-1104P-201ENST00000384723 104 ntBASIC0.47□□□□□ -2.33
RSPO3Q9BXY4 SNORD99-201ENST00000408612 74 ntBASIC0.47□□□□□ -2.33
RSPO3Q9BXY4 AC244098.3-201ENST00000424803 96 ntBASIC0.47□□□□□ -2.33
RSPO3Q9BXY4 RNU7-200P-201ENST00000516105 62 ntBASIC0.47□□□□□ -2.33
RSPO3Q9BXY4 MIR4305-201ENST00000583252 102 ntBASIC0.47□□□□□ -2.33
RSPO3Q9BXY4 AL353765.1-201ENST00000605514 183 ntBASIC0.47□□□□□ -2.33
RSPO3Q9BXY4 MIR5087-201ENST00000635826 76 ntBASIC0.47□□□□□ -2.33
RSPO3Q9BXY4 RNU6-915P-201ENST00000364943 103 ntBASIC0.46□□□□□ -2.34
RSPO3Q9BXY4 Y_RNA.420-201ENST00000384043 110 ntBASIC0.46□□□□□ -2.34
RSPO3Q9BXY4 MIR520F-201ENST00000384824 87 ntBASIC0.46□□□□□ -2.34
RSPO3Q9BXY4 SNORD105-201ENST00000386910 85 ntBASIC0.46□□□□□ -2.34
RSPO3Q9BXY4 MT-TI-201ENST00000387365 69 ntBASIC0.46□□□□□ -2.34
RSPO3Q9BXY4 MTATP6P21-201ENST00000440681 189 ntBASIC0.46□□□□□ -2.34
RSPO3Q9BXY4 COX6CP6-201ENST00000490840 228 ntBASIC0.46□□□□□ -2.34
RSPO3Q9BXY4 RNU6-977P-201ENST00000516411 103 ntBASIC0.46□□□□□ -2.34
RSPO3Q9BXY4 RNU6-426P-201ENST00000516464 97 ntBASIC0.46□□□□□ -2.34
RSPO3Q9BXY4 RNA5SP395-201ENST00000516567 118 ntBASIC0.46□□□□□ -2.34
RSPO3Q9BXY4 AC022523.2-201ENST00000561045 150 ntBASIC0.46□□□□□ -2.34
RSPO3Q9BXY4 AC011603.4-201ENST00000611325 277 ntBASIC0.46□□□□□ -2.34
RSPO3Q9BXY4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
RSPO3Q9BXY4 SNORD18B-201ENST00000365659 72 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 RNU6-949P-201ENST00000384040 107 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 SNORA32-201ENST00000384072 121 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 Y_RNA.531-201ENST00000384589 121 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 MIR125B2-201ENST00000385128 89 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 Y_RNA.588-201ENST00000391254 102 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 AC067940.1-201ENST00000458411 300 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 RNU7-164P-201ENST00000459221 62 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 RNU7-113P-201ENST00000459273 62 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 RNU7-123P-201ENST00000515911 60 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 RNU5E-3P-201ENST00000515913 68 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 RNU7-79P-201ENST00000516082 62 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 RNA5SP33-201ENST00000516687 98 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 RNU7-35P-201ENST00000517174 62 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 AC133485.4-201ENST00000561835 220 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 AC138907.4-201ENST00000570107 226 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 MIR548AE2-201ENST00000583456 67 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 AL359881.1-201ENST00000602916 267 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 AC021443.1-201ENST00000604478 211 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 MIR8066-201ENST00000617280 78 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 AP001340.1-201ENST00000624405 217 ntBASIC0.45□□□□□ -2.34
RSPO3Q9BXY4 Y_RNA.114-201ENST00000363265 113 ntBASIC0.44□□□□□ -2.34
RSPO3Q9BXY4 Y_RNA.280-201ENST00000364765 112 ntBASIC0.44□□□□□ -2.34
RSPO3Q9BXY4 Y_RNA.298-201ENST00000364960 107 ntBASIC0.44□□□□□ -2.34
RSPO3Q9BXY4 RNY1P8-201ENST00000383970 114 ntBASIC0.44□□□□□ -2.34
RSPO3Q9BXY4 RNU6-110P-201ENST00000384508 104 ntBASIC0.44□□□□□ -2.34
RSPO3Q9BXY4 MIR520H-201ENST00000385126 88 ntBASIC0.44□□□□□ -2.34
RSPO3Q9BXY4 MT-TF-201ENST00000387314 71 ntBASIC0.44□□□□□ -2.34
RSPO3Q9BXY4 MIR513C-201ENST00000401352 84 ntBASIC0.44□□□□□ -2.34
RSPO3Q9BXY4 RNA5SP237-201ENST00000410414 113 ntBASIC0.44□□□□□ -2.34
RSPO3Q9BXY4 AL022718.1-201ENST00000412004 84 ntBASIC0.44□□□□□ -2.34
RSPO3Q9BXY4 RNU7-102P-201ENST00000458948 62 ntBASIC0.44□□□□□ -2.34
RSPO3Q9BXY4 RNU7-156P-201ENST00000517214 74 ntBASIC0.44□□□□□ -2.34
RSPO3Q9BXY4 AC011195.1-201ENST00000578177 177 ntBASIC0.44□□□□□ -2.34
RSPO3Q9BXY4 MIR4491-201ENST00000581087 68 ntBASIC0.44□□□□□ -2.34
RSPO3Q9BXY4 AC025627.3-201ENST00000582078 182 ntBASIC0.44□□□□□ -2.34
RSPO3Q9BXY4 SNORD92-201ENST00000585078 85 ntBASIC0.44□□□□□ -2.34
RSPO3Q9BXY4 AL137067.1-201ENST00000615933 120 ntBASIC0.44□□□□□ -2.34
RSPO3Q9BXY4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.43□□□□□ -2.34
RSPO3Q9BXY4 RNU6-209P-201ENST00000384118 107 ntBASIC0.43□□□□□ -2.34
RSPO3Q9BXY4 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
RSPO3Q9BXY4 Y_RNA.488-201ENST00000384403 102 ntBASIC0.43□□□□□ -2.34
RSPO3Q9BXY4 RNU1-119P-201ENST00000391122 165 ntBASIC0.43□□□□□ -2.34
RSPO3Q9BXY4 MIR938-201ENST00000401216 83 ntBASIC0.43□□□□□ -2.34
RSPO3Q9BXY4 SNORD93-201ENST00000408813 74 ntBASIC0.43□□□□□ -2.34
RSPO3Q9BXY4 Y_RNA.617-201ENST00000410920 90 ntBASIC0.43□□□□□ -2.34
RSPO3Q9BXY4 RNU6-1086P-201ENST00000410930 100 ntBASIC0.43□□□□□ -2.34
RSPO3Q9BXY4 MTND4LP9-201ENST00000427694 174 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 204 ms