Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 U7.7-201ENST00000459276 60 ntBASIC1.06□□□□□ -2.24
HERPUD2Q9BSE4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.06□□□□□ -2.24
HERPUD2Q9BSE4 AC211469.2-201ENST00000605461 205 ntBASIC1.06□□□□□ -2.24
HERPUD2Q9BSE4 RNU6-766P-201ENST00000362478 107 ntBASIC1.05□□□□□ -2.24
HERPUD2Q9BSE4 SNORA63.5-201ENST00000363548 123 ntBASIC1.05□□□□□ -2.24
HERPUD2Q9BSE4 Y_RNA.171-201ENST00000363760 102 ntBASIC1.05□□□□□ -2.24
HERPUD2Q9BSE4 Y_RNA.351-201ENST00000365436 96 ntBASIC1.05□□□□□ -2.24
HERPUD2Q9BSE4 Y_RNA.388-201ENST00000383919 113 ntBASIC1.05□□□□□ -2.24
HERPUD2Q9BSE4 SNORA24-201ENST00000384096 131 ntBASIC1.05□□□□□ -2.24
HERPUD2Q9BSE4 RNY1P6-201ENST00000384193 109 ntBASIC1.05□□□□□ -2.24
HERPUD2Q9BSE4 SNORA27-201ENST00000384323 126 ntBASIC1.05□□□□□ -2.24
HERPUD2Q9BSE4 RNU6-913P-201ENST00000390913 95 ntBASIC1.05□□□□□ -2.24
HERPUD2Q9BSE4 RNA5SP95-201ENST00000410319 137 ntBASIC1.05□□□□□ -2.24
HERPUD2Q9BSE4 RNA5SP144-201ENST00000410846 116 ntBASIC1.05□□□□□ -2.24
HERPUD2Q9BSE4 RNU6-998P-201ENST00000515894 101 ntBASIC1.05□□□□□ -2.24
HERPUD2Q9BSE4 AC068339.1-201ENST00000526965 141 ntBASIC1.05□□□□□ -2.24
HERPUD2Q9BSE4 MIR5009-201ENST00000578736 100 ntBASIC1.05□□□□□ -2.24
HERPUD2Q9BSE4 AC025627.3-201ENST00000582078 182 ntBASIC1.05□□□□□ -2.24
HERPUD2Q9BSE4 MIR4305-201ENST00000583252 102 ntBASIC1.05□□□□□ -2.24
HERPUD2Q9BSE4 MIR1255B1-201ENST00000636325 63 ntBASIC1.05□□□□□ -2.24
HERPUD2Q9BSE4 MIR6841-201ENST00000637129 72 ntBASIC1.05□□□□□ -2.24
HERPUD2Q9BSE4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
HERPUD2Q9BSE4 SNORD73B-201ENST00000364394 72 ntBASIC1.04□□□□□ -2.24
HERPUD2Q9BSE4 RNU4-38P-201ENST00000364472 129 ntBASIC1.04□□□□□ -2.24
HERPUD2Q9BSE4 RNU4-16P-201ENST00000364737 141 ntBASIC1.04□□□□□ -2.24
HERPUD2Q9BSE4 RNU6-32P-201ENST00000383948 107 ntBASIC1.04□□□□□ -2.24
HERPUD2Q9BSE4 RNU6-13P-201ENST00000384248 107 ntBASIC1.04□□□□□ -2.24
HERPUD2Q9BSE4 Y_RNA.466-201ENST00000384294 113 ntBASIC1.04□□□□□ -2.24
HERPUD2Q9BSE4 Y_RNA.470-201ENST00000384307 117 ntBASIC1.04□□□□□ -2.24
HERPUD2Q9BSE4 RNU6-12P-201ENST00000384604 107 ntBASIC1.04□□□□□ -2.24
HERPUD2Q9BSE4 RNU6-41P-201ENST00000384741 107 ntBASIC1.04□□□□□ -2.24
HERPUD2Q9BSE4 RNY1P7-201ENST00000384743 110 ntBASIC1.04□□□□□ -2.24
HERPUD2Q9BSE4 MIR608-201ENST00000384820 100 ntBASIC1.04□□□□□ -2.24
HERPUD2Q9BSE4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.04□□□□□ -2.24
HERPUD2Q9BSE4 AL031737.1-201ENST00000450125 223 ntBASIC1.04□□□□□ -2.24
HERPUD2Q9BSE4 RNU7-164P-201ENST00000459221 62 ntBASIC1.04□□□□□ -2.24
HERPUD2Q9BSE4 RPL39P34-201ENST00000477141 156 ntBASIC1.04□□□□□ -2.24
HERPUD2Q9BSE4 RNU6-904P-201ENST00000516206 101 ntBASIC1.04□□□□□ -2.24
HERPUD2Q9BSE4 RNU6-762P-201ENST00000517107 102 ntBASIC1.04□□□□□ -2.24
HERPUD2Q9BSE4 MIR548Z-201ENST00000584743 97 ntBASIC1.04□□□□□ -2.24
HERPUD2Q9BSE4 AC021443.1-201ENST00000604478 211 ntBASIC1.04□□□□□ -2.24
HERPUD2Q9BSE4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.04□□□□□ -2.24
HERPUD2Q9BSE4 Y_RNA.168-201ENST00000363740 102 ntBASIC1.03□□□□□ -2.24
HERPUD2Q9BSE4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.03□□□□□ -2.24
HERPUD2Q9BSE4 RNU6-1131P-201ENST00000364955 107 ntBASIC1.03□□□□□ -2.24
HERPUD2Q9BSE4 RNU6-690P-201ENST00000365242 106 ntBASIC1.03□□□□□ -2.24
HERPUD2Q9BSE4 RNU6-756P-201ENST00000383997 107 ntBASIC1.03□□□□□ -2.24
HERPUD2Q9BSE4 MIR548D2-201ENST00000384955 97 ntBASIC1.03□□□□□ -2.24
HERPUD2Q9BSE4 MT-TN-201ENST00000387400 73 ntBASIC1.03□□□□□ -2.24
HERPUD2Q9BSE4 RNU6-1307P-201ENST00000391012 103 ntBASIC1.03□□□□□ -2.24
HERPUD2Q9BSE4 RPS29P24-201ENST00000486345 171 ntBASIC1.03□□□□□ -2.24
HERPUD2Q9BSE4 Y_RNA.677-201ENST00000516401 85 ntBASIC1.03□□□□□ -2.24
HERPUD2Q9BSE4 Y_RNA.694-201ENST00000516677 117 ntBASIC1.03□□□□□ -2.24
HERPUD2Q9BSE4 RNU7-53P-201ENST00000516705 60 ntBASIC1.03□□□□□ -2.24
HERPUD2Q9BSE4 AC004812.1-201ENST00000540773 146 ntBASIC1.03□□□□□ -2.24
HERPUD2Q9BSE4 SNORD115-2-201ENST00000362842 82 ntBASIC1.02□□□□□ -2.25
HERPUD2Q9BSE4 RNU6-1099P-201ENST00000363533 107 ntBASIC1.02□□□□□ -2.25
HERPUD2Q9BSE4 SNORD115-20-201ENST00000365099 82 ntBASIC1.02□□□□□ -2.25
HERPUD2Q9BSE4 SNORA51.5-201ENST00000384126 131 ntBASIC1.02□□□□□ -2.25
HERPUD2Q9BSE4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.02□□□□□ -2.25
HERPUD2Q9BSE4 AC090844.1-201ENST00000422019 156 ntBASIC1.02□□□□□ -2.25
HERPUD2Q9BSE4 AC113410.1-201ENST00000505029 247 ntBASIC1.02□□□□□ -2.25
HERPUD2Q9BSE4 RNU6-1110P-201ENST00000516462 101 ntBASIC1.02□□□□□ -2.25
HERPUD2Q9BSE4 AL596211.1-201ENST00000569873 2277 ntBASIC1.02□□□□□ -2.25
HERPUD2Q9BSE4 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
HERPUD2Q9BSE4 MIR8055-201ENST00000610739 97 ntBASIC1.02□□□□□ -2.25
HERPUD2Q9BSE4 AC021613.1-201ENST00000623880 111 ntBASIC1.02□□□□□ -2.25
HERPUD2Q9BSE4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
HERPUD2Q9BSE4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.02□□□□□ -2.25
HERPUD2Q9BSE4 SNORD115-19-201ENST00000363098 82 ntBASIC1.01□□□□□ -2.25
HERPUD2Q9BSE4 SNORD115-18-201ENST00000363293 82 ntBASIC1.01□□□□□ -2.25
HERPUD2Q9BSE4 SNORD115-17-201ENST00000364612 82 ntBASIC1.01□□□□□ -2.25
HERPUD2Q9BSE4 RNU1-133P-201ENST00000364867 167 ntBASIC1.01□□□□□ -2.25
HERPUD2Q9BSE4 Y_RNA.531-201ENST00000384589 121 ntBASIC1.01□□□□□ -2.25
HERPUD2Q9BSE4 MIR605-201ENST00000385078 83 ntBASIC1.01□□□□□ -2.25
HERPUD2Q9BSE4 RNU6-679P-201ENST00000391003 106 ntBASIC1.01□□□□□ -2.25
HERPUD2Q9BSE4 RNY4P30-201ENST00000410216 95 ntBASIC1.01□□□□□ -2.25
HERPUD2Q9BSE4 MTATP8P2-201ENST00000435212 202 ntBASIC1.01□□□□□ -2.25
HERPUD2Q9BSE4 RNU2-11P-201ENST00000459191 187 ntBASIC1.01□□□□□ -2.25
HERPUD2Q9BSE4 MIR4264-201ENST00000583520 66 ntBASIC1.01□□□□□ -2.25
HERPUD2Q9BSE4 AC091304.10-201ENST00000641554 121 ntBASIC1.01□□□□□ -2.25
HERPUD2Q9BSE4 MIR377-201ENST00000362145 69 ntBASIC1□□□□□ -2.25
HERPUD2Q9BSE4 MIR1-1-201ENST00000362147 71 ntBASIC1□□□□□ -2.25
HERPUD2Q9BSE4 MIR342-201ENST00000362212 99 ntBASIC1□□□□□ -2.25
HERPUD2Q9BSE4 RNY4P6-201ENST00000363667 96 ntBASIC1□□□□□ -2.25
HERPUD2Q9BSE4 RNU6-1187P-201ENST00000364771 110 ntBASIC1□□□□□ -2.25
HERPUD2Q9BSE4 Y_RNA.342-201ENST00000365352 113 ntBASIC1□□□□□ -2.25
HERPUD2Q9BSE4 MIR577-201ENST00000385196 96 ntBASIC1□□□□□ -2.25
HERPUD2Q9BSE4 RNU6-1319P-201ENST00000390855 104 ntBASIC1□□□□□ -2.25
HERPUD2Q9BSE4 RNU6-205P-201ENST00000390858 107 ntBASIC1□□□□□ -2.25
HERPUD2Q9BSE4 RNU6-747P-201ENST00000390928 104 ntBASIC1□□□□□ -2.25
HERPUD2Q9BSE4 RNU6-241P-201ENST00000391148 104 ntBASIC1□□□□□ -2.25
HERPUD2Q9BSE4 RNU6-177P-201ENST00000411257 104 ntBASIC1□□□□□ -2.25
HERPUD2Q9BSE4 HMGN1P33-201ENST00000432945 451 ntBASIC1□□□□□ -2.25
HERPUD2Q9BSE4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1□□□□□ -2.25
HERPUD2Q9BSE4 RNU7-73P-201ENST00000458743 63 ntBASIC1□□□□□ -2.25
HERPUD2Q9BSE4 PSMC1P5-201ENST00000512850 177 ntBASIC1□□□□□ -2.25
HERPUD2Q9BSE4 RNU6-412P-201ENST00000516434 106 ntBASIC1□□□□□ -2.25
HERPUD2Q9BSE4 MIR4452-201ENST00000583004 71 ntBASIC1□□□□□ -2.25
HERPUD2Q9BSE4 AC062037.1-201ENST00000605302 128 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 259.9 ms