Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.15□□□□□ -2.59
LYSMD1Q96S90 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.15□□□□□ -2.59
LYSMD1Q96S90 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.15□□□□□ -2.59
LYSMD1Q96S90 MIR559-201ENST00000385188 96 ntBASIC-1.15□□□□□ -2.59
LYSMD1Q96S90 MIR519A1-201ENST00000385257 85 ntBASIC-1.15□□□□□ -2.59
LYSMD1Q96S90 MIR652-201ENST00000385278 98 ntBASIC-1.15□□□□□ -2.59
LYSMD1Q96S90 MT-TY-201ENST00000387409 66 ntBASIC-1.15□□□□□ -2.59
LYSMD1Q96S90 MIR548I2-201ENST00000408348 149 ntBASIC-1.15□□□□□ -2.59
LYSMD1Q96S90 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.15□□□□□ -2.59
LYSMD1Q96S90 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.15□□□□□ -2.59
LYSMD1Q96S90 RNU6-274P-201ENST00000459566 107 ntBASIC-1.15□□□□□ -2.59
LYSMD1Q96S90 AC245505.1-201ENST00000556398 224 ntBASIC-1.15□□□□□ -2.59
LYSMD1Q96S90 MIR5690-201ENST00000583739 73 ntBASIC-1.15□□□□□ -2.59
LYSMD1Q96S90 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.16□□□□□ -2.6
LYSMD1Q96S90 RNY1P6-201ENST00000384193 109 ntBASIC-1.16□□□□□ -2.6
LYSMD1Q96S90 SNORA49-201ENST00000386157 136 ntBASIC-1.16□□□□□ -2.6
LYSMD1Q96S90 RNU7-48P-201ENST00000458875 63 ntBASIC-1.16□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.16□□□□□ -2.6
LYSMD1Q96S90 RNU6-358P-201ENST00000516564 75 ntBASIC-1.16□□□□□ -2.6
LYSMD1Q96S90 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.16□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.16□□□□□ -2.6
LYSMD1Q96S90 SNORA40.17-201ENST00000517256 115 ntBASIC-1.16□□□□□ -2.6
LYSMD1Q96S90 AC140658.3-201ENST00000567603 271 ntBASIC-1.16□□□□□ -2.6
LYSMD1Q96S90 AL008718.3-201ENST00000610217 321 ntBASIC-1.16□□□□□ -2.6
LYSMD1Q96S90 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.16□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.17□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.17□□□□□ -2.6
LYSMD1Q96S90 MIR181A1-201ENST00000385026 110 ntBASIC-1.17□□□□□ -2.6
LYSMD1Q96S90 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.17□□□□□ -2.6
LYSMD1Q96S90 RNU7-106P-201ENST00000459514 67 ntBASIC-1.17□□□□□ -2.6
LYSMD1Q96S90 HAR1A.1-201ENST00000459583 118 ntBASIC-1.17□□□□□ -2.6
LYSMD1Q96S90 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.17□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.17□□□□□ -2.6
LYSMD1Q96S90 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.17□□□□□ -2.6
LYSMD1Q96S90 MIR4499-201ENST00000584834 69 ntBASIC-1.17□□□□□ -2.6
LYSMD1Q96S90 AC145423.2-201ENST00000610631 239 ntBASIC-1.17□□□□□ -2.6
LYSMD1Q96S90 SNORD115-2-201ENST00000362842 82 ntBASIC-1.18□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.18□□□□□ -2.6
LYSMD1Q96S90 SNORD115-20-201ENST00000365099 82 ntBASIC-1.18□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.18□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.18□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.18□□□□□ -2.6
LYSMD1Q96S90 AL606845.1-201ENST00000404881 255 ntBASIC-1.18□□□□□ -2.6
LYSMD1Q96S90 AL731563.1-201ENST00000442202 214 ntBASIC-1.18□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.18□□□□□ -2.6
LYSMD1Q96S90 RNU7-30P-201ENST00000516835 62 ntBASIC-1.18□□□□□ -2.6
LYSMD1Q96S90 SCARNA15-202ENST00000516881 127 ntBASIC-1.18□□□□□ -2.6
LYSMD1Q96S90 MIR5688-201ENST00000580619 83 ntBASIC-1.18□□□□□ -2.6
LYSMD1Q96S90 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.18□□□□□ -2.6
LYSMD1Q96S90 AL365205.2-201ENST00000594586 68 ntBASIC-1.18□□□□□ -2.6
LYSMD1Q96S90 MIR6738-201ENST00000619620 64 ntBASIC-1.18□□□□□ -2.6
LYSMD1Q96S90 U4.1-201ENST00000620349 87 ntBASIC-1.18□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.19□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.19□□□□□ -2.6
LYSMD1Q96S90 RNU6-973P-201ENST00000364690 107 ntBASIC-1.19□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.19□□□□□ -2.6
LYSMD1Q96S90 RNU6-130P-201ENST00000411112 103 ntBASIC-1.19□□□□□ -2.6
LYSMD1Q96S90 HSPE1P25-201ENST00000455484 251 ntBASIC-1.19□□□□□ -2.6
LYSMD1Q96S90 RNU6-287P-201ENST00000516230 98 ntBASIC-1.19□□□□□ -2.6
LYSMD1Q96S90 RNU6-570P-201ENST00000517051 105 ntBASIC-1.19□□□□□ -2.6
LYSMD1Q96S90 MIR4324-201ENST00000584846 72 ntBASIC-1.19□□□□□ -2.6
LYSMD1Q96S90 PART1_1.1-201ENST00000611761 217 ntBASIC-1.19□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.2□□□□□ -2.6
LYSMD1Q96S90 MIR587-201ENST00000384845 96 ntBASIC-1.2□□□□□ -2.6
LYSMD1Q96S90 MIR206-201ENST00000384872 86 ntBASIC-1.2□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.2□□□□□ -2.6
LYSMD1Q96S90 SNORD116.3-201ENST00000517176 78 ntBASIC-1.2□□□□□ -2.6
LYSMD1Q96S90 AC007012.1-201ENST00000567192 175 ntBASIC-1.2□□□□□ -2.6
LYSMD1Q96S90 MIR376A1-201ENST00000616574 68 ntBASIC-1.2□□□□□ -2.6
LYSMD1Q96S90 AP001362.1-201ENST00000625165 124 ntBASIC-1.2□□□□□ -2.6
LYSMD1Q96S90 snoU18.1-201ENST00000629629 71 ntBASIC-1.2□□□□□ -2.6
LYSMD1Q96S90 SNORA25.1-201ENST00000362326 128 ntBASIC-1.21□□□□□ -2.6
LYSMD1Q96S90 RNU4-90P-201ENST00000362773 141 ntBASIC-1.21□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.21□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.21□□□□□ -2.6
LYSMD1Q96S90 SNORD115-35-201ENST00000365122 82 ntBASIC-1.21□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.21□□□□□ -2.6
LYSMD1Q96S90 SNORA79-201ENST00000408376 140 ntBASIC-1.21□□□□□ -2.6
LYSMD1Q96S90 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.21□□□□□ -2.6
LYSMD1Q96S90 MIR3908-201ENST00000579798 126 ntBASIC-1.21□□□□□ -2.6
LYSMD1Q96S90 MIR6854-201ENST00000614935 69 ntBASIC-1.21□□□□□ -2.6
LYSMD1Q96S90 MIR8068-201ENST00000618032 68 ntBASIC-1.21□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.22□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.22□□□□□ -2.6
LYSMD1Q96S90 MIR1270-201ENST00000459320 83 ntBASIC-1.22□□□□□ -2.6
LYSMD1Q96S90 RNU6-453P-201ENST00000516819 85 ntBASIC-1.22□□□□□ -2.6
LYSMD1Q96S90 AC103591.3-201ENST00000608684 209 ntBASIC-1.22□□□□□ -2.6
LYSMD1Q96S90 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.23□□□□□ -2.61
LYSMD1Q96S90 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.23□□□□□ -2.61
LYSMD1Q96S90 RNU6-571P-201ENST00000384128 107 ntBASIC-1.23□□□□□ -2.61
LYSMD1Q96S90 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.23□□□□□ -2.61
LYSMD1Q96S90 MIR516A2-201ENST00000384888 90 ntBASIC-1.23□□□□□ -2.61
LYSMD1Q96S90 MIR516A1-201ENST00000385033 90 ntBASIC-1.23□□□□□ -2.61
LYSMD1Q96S90 SNORD64-201ENST00000386683 67 ntBASIC-1.23□□□□□ -2.61
LYSMD1Q96S90 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.23□□□□□ -2.61
LYSMD1Q96S90 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.23□□□□□ -2.61
LYSMD1Q96S90 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.23□□□□□ -2.61
LYSMD1Q96S90 MIR4760-201ENST00000585040 80 ntBASIC-1.23□□□□□ -2.61
LYSMD1Q96S90 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.24□□□□□ -2.61
LYSMD1Q96S90 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms