Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 MIR1255B1-201ENST00000636325 63 ntBASIC1.23□□□□□ -2.21
ATG4AQ8WYN0 AL162726.3-218ENST00000636401 95 ntBASIC1.23□□□□□ -2.21
ATG4AQ8WYN0 Y_RNA.49-201ENST00000362714 112 ntBASIC1.22□□□□□ -2.21
ATG4AQ8WYN0 SNORD114-10-201ENST00000363409 72 ntBASIC1.22□□□□□ -2.21
ATG4AQ8WYN0 RNA5SP247-201ENST00000411181 105 ntBASIC1.22□□□□□ -2.21
ATG4AQ8WYN0 RNU7-137P-201ENST00000516788 62 ntBASIC1.22□□□□□ -2.21
ATG4AQ8WYN0 AL157834.3-201ENST00000615543 103 ntBASIC1.22□□□□□ -2.21
ATG4AQ8WYN0 AC027335.2-201ENST00000624030 375 ntBASIC1.22□□□□□ -2.21
ATG4AQ8WYN0 Y_RNA.309-201ENST00000365046 111 ntBASIC1.21□□□□□ -2.22
ATG4AQ8WYN0 RNY4P18-201ENST00000391107 89 ntBASIC1.21□□□□□ -2.22
ATG4AQ8WYN0 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
ATG4AQ8WYN0 MIR1912-201ENST00000410389 80 ntBASIC1.21□□□□□ -2.22
ATG4AQ8WYN0 snoU13.21-201ENST00000459368 105 ntBASIC1.21□□□□□ -2.22
ATG4AQ8WYN0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.21□□□□□ -2.22
ATG4AQ8WYN0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
ATG4AQ8WYN0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
ATG4AQ8WYN0 RNU4-67P-201ENST00000364569 141 ntBASIC1.2□□□□□ -2.22
ATG4AQ8WYN0 RNU6-1107P-201ENST00000364817 104 ntBASIC1.2□□□□□ -2.22
ATG4AQ8WYN0 Y_RNA.327-201ENST00000365201 102 ntBASIC1.2□□□□□ -2.22
ATG4AQ8WYN0 Y_RNA.507-201ENST00000384500 99 ntBASIC1.2□□□□□ -2.22
ATG4AQ8WYN0 MIR206-201ENST00000384872 86 ntBASIC1.2□□□□□ -2.22
ATG4AQ8WYN0 RNU6-816P-201ENST00000390914 107 ntBASIC1.2□□□□□ -2.22
ATG4AQ8WYN0 RNU6-1268P-201ENST00000391214 107 ntBASIC1.2□□□□□ -2.22
ATG4AQ8WYN0 RNU6-1239P-201ENST00000391310 107 ntBASIC1.2□□□□□ -2.22
ATG4AQ8WYN0 AL035461.1-201ENST00000421490 332 ntBASIC1.2□□□□□ -2.22
ATG4AQ8WYN0 AC002429.1-201ENST00000437672 148 ntBASIC1.2□□□□□ -2.22
ATG4AQ8WYN0 RPL39P25-201ENST00000449384 154 ntBASIC1.2□□□□□ -2.22
ATG4AQ8WYN0 RNU7-2P-201ENST00000516096 62 ntBASIC1.2□□□□□ -2.22
ATG4AQ8WYN0 RNU6-363P-201ENST00000362895 105 ntBASIC1.19□□□□□ -2.22
ATG4AQ8WYN0 SNORD115-35-201ENST00000365122 82 ntBASIC1.19□□□□□ -2.22
ATG4AQ8WYN0 AC068339.1-201ENST00000526965 141 ntBASIC1.19□□□□□ -2.22
ATG4AQ8WYN0 RNU6-94P-201ENST00000607728 107 ntBASIC1.19□□□□□ -2.22
ATG4AQ8WYN0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.19□□□□□ -2.22
ATG4AQ8WYN0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
ATG4AQ8WYN0 U8.6-201ENST00000364939 135 ntBASIC1.18□□□□□ -2.22
ATG4AQ8WYN0 Y_RNA.323-201ENST00000365157 109 ntBASIC1.18□□□□□ -2.22
ATG4AQ8WYN0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.18□□□□□ -2.22
ATG4AQ8WYN0 RNU6-447P-201ENST00000410293 104 ntBASIC1.18□□□□□ -2.22
ATG4AQ8WYN0 RNU6-1118P-201ENST00000410382 104 ntBASIC1.18□□□□□ -2.22
ATG4AQ8WYN0 RNU6-1076P-201ENST00000410397 104 ntBASIC1.18□□□□□ -2.22
ATG4AQ8WYN0 RNU6-355P-201ENST00000410427 104 ntBASIC1.18□□□□□ -2.22
ATG4AQ8WYN0 RNU6-791P-201ENST00000410467 104 ntBASIC1.18□□□□□ -2.22
ATG4AQ8WYN0 RNU6-994P-201ENST00000410507 111 ntBASIC1.18□□□□□ -2.22
ATG4AQ8WYN0 RNU6-705P-201ENST00000410601 104 ntBASIC1.18□□□□□ -2.22
ATG4AQ8WYN0 RNU6-1100P-201ENST00000410691 104 ntBASIC1.18□□□□□ -2.22
ATG4AQ8WYN0 RNU6-860P-201ENST00000410860 104 ntBASIC1.18□□□□□ -2.22
ATG4AQ8WYN0 RNU6-1217P-201ENST00000411276 104 ntBASIC1.18□□□□□ -2.22
ATG4AQ8WYN0 RNU6-785P-201ENST00000411324 104 ntBASIC1.18□□□□□ -2.22
ATG4AQ8WYN0 SNORD83.1-201ENST00000411362 77 ntBASIC1.18□□□□□ -2.22
ATG4AQ8WYN0 AC019288.1-201ENST00000557918 224 ntBASIC1.18□□□□□ -2.22
ATG4AQ8WYN0 MIR5009-201ENST00000578736 100 ntBASIC1.18□□□□□ -2.22
ATG4AQ8WYN0 U6.90-201ENST00000614007 104 ntBASIC1.18□□□□□ -2.22
ATG4AQ8WYN0 U6.70-201ENST00000620287 104 ntBASIC1.18□□□□□ -2.22
ATG4AQ8WYN0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
ATG4AQ8WYN0 MIR26B-201ENST00000362251 77 ntBASIC1.17□□□□□ -2.22
ATG4AQ8WYN0 Y_RNA.155-201ENST00000363632 101 ntBASIC1.17□□□□□ -2.22
ATG4AQ8WYN0 RNU6-934P-201ENST00000365154 107 ntBASIC1.17□□□□□ -2.22
ATG4AQ8WYN0 MIR19B1-201ENST00000384829 87 ntBASIC1.17□□□□□ -2.22
ATG4AQ8WYN0 U8.15-201ENST00000390947 134 ntBASIC1.17□□□□□ -2.22
ATG4AQ8WYN0 RNU6-521P-201ENST00000516663 105 ntBASIC1.17□□□□□ -2.22
ATG4AQ8WYN0 AC105081.1-201ENST00000617727 106 ntBASIC1.17□□□□□ -2.22
ATG4AQ8WYN0 AL353770.2-201ENST00000620024 78 ntBASIC1.17□□□□□ -2.22
ATG4AQ8WYN0 AL391516.1-201ENST00000554380 2449 ntBASIC1.17□□□□□ -2.22
ATG4AQ8WYN0 SNORA22-201ENST00000383907 134 ntBASIC1.16□□□□□ -2.22
ATG4AQ8WYN0 RNU6-1014P-201ENST00000383940 103 ntBASIC1.16□□□□□ -2.22
ATG4AQ8WYN0 RNU6-409P-201ENST00000384114 104 ntBASIC1.16□□□□□ -2.22
ATG4AQ8WYN0 Y_RNA.448-201ENST00000384185 108 ntBASIC1.16□□□□□ -2.22
ATG4AQ8WYN0 RNU6-1321P-201ENST00000390905 107 ntBASIC1.16□□□□□ -2.22
ATG4AQ8WYN0 RNU6-1307P-201ENST00000391012 103 ntBASIC1.16□□□□□ -2.22
ATG4AQ8WYN0 MIR1257-201ENST00000408490 117 ntBASIC1.16□□□□□ -2.22
ATG4AQ8WYN0 SNORA7.5-201ENST00000410672 110 ntBASIC1.16□□□□□ -2.22
ATG4AQ8WYN0 AC096949.1-201ENST00000412047 152 ntBASIC1.16□□□□□ -2.22
ATG4AQ8WYN0 RNU7-40P-201ENST00000516397 64 ntBASIC1.16□□□□□ -2.22
ATG4AQ8WYN0 MIR4771-2-201ENST00000577758 74 ntBASIC1.16□□□□□ -2.22
ATG4AQ8WYN0 MIR4771-1-201ENST00000582617 74 ntBASIC1.16□□□□□ -2.22
ATG4AQ8WYN0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.16□□□□□ -2.22
ATG4AQ8WYN0 AC023934.1-201ENST00000574529 2389 ntBASIC1.16□□□□□ -2.22
ATG4AQ8WYN0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
ATG4AQ8WYN0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
ATG4AQ8WYN0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
ATG4AQ8WYN0 RNU6-755P-201ENST00000364400 103 ntBASIC1.15□□□□□ -2.23
ATG4AQ8WYN0 RNU6-392P-201ENST00000364926 101 ntBASIC1.15□□□□□ -2.23
ATG4AQ8WYN0 RNU6-44P-201ENST00000384045 107 ntBASIC1.15□□□□□ -2.23
ATG4AQ8WYN0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.15□□□□□ -2.23
ATG4AQ8WYN0 RNU6-733P-201ENST00000410759 104 ntBASIC1.15□□□□□ -2.23
ATG4AQ8WYN0 RPS26P5-201ENST00000418544 335 ntBASIC1.15□□□□□ -2.23
ATG4AQ8WYN0 RNU7-185P-201ENST00000459215 60 ntBASIC1.15□□□□□ -2.23
ATG4AQ8WYN0 AC133485.1-201ENST00000567176 124 ntBASIC1.15□□□□□ -2.23
ATG4AQ8WYN0 MIR6078-201ENST00000611069 100 ntBASIC1.15□□□□□ -2.23
ATG4AQ8WYN0 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.15□□□□□ -2.23
ATG4AQ8WYN0 MIR8070-201ENST00000616510 88 ntBASIC1.15□□□□□ -2.23
ATG4AQ8WYN0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
ATG4AQ8WYN0 Y_RNA.226-201ENST00000364337 114 ntBASIC1.14□□□□□ -2.23
ATG4AQ8WYN0 RNU6-865P-201ENST00000364772 107 ntBASIC1.14□□□□□ -2.23
ATG4AQ8WYN0 SNORA25.8-201ENST00000364831 128 ntBASIC1.14□□□□□ -2.23
ATG4AQ8WYN0 RNU1-36P-201ENST00000365130 165 ntBASIC1.14□□□□□ -2.23
ATG4AQ8WYN0 RNU6-679P-201ENST00000391003 106 ntBASIC1.14□□□□□ -2.23
ATG4AQ8WYN0 SNORD93-201ENST00000408813 74 ntBASIC1.14□□□□□ -2.23
ATG4AQ8WYN0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.14□□□□□ -2.23
ATG4AQ8WYN0 AL353813.1-201ENST00000440700 253 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms