Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MIR6717-201ENST00000622747 73 ntBASIC1.23□□□□□ -2.21
SNED1Q8TER0 SNORA22.1-201ENST00000362701 134 ntBASIC1.22□□□□□ -2.21
SNED1Q8TER0 Y_RNA.369-201ENST00000365568 117 ntBASIC1.22□□□□□ -2.21
SNED1Q8TER0 SNORA24-201ENST00000384096 131 ntBASIC1.22□□□□□ -2.21
SNED1Q8TER0 MIR193B-201ENST00000384907 83 ntBASIC1.22□□□□□ -2.21
SNED1Q8TER0 MIR150-201ENST00000385048 84 ntBASIC1.22□□□□□ -2.21
SNED1Q8TER0 RNU6-913P-201ENST00000390913 95 ntBASIC1.22□□□□□ -2.21
SNED1Q8TER0 SNORA19.1-201ENST00000410656 129 ntBASIC1.22□□□□□ -2.21
SNED1Q8TER0 RNU7-73P-201ENST00000458743 63 ntBASIC1.22□□□□□ -2.21
SNED1Q8TER0 RNU6-109P-201ENST00000516364 107 ntBASIC1.22□□□□□ -2.21
SNED1Q8TER0 RNU6-184P-201ENST00000516514 107 ntBASIC1.22□□□□□ -2.21
SNED1Q8TER0 AC141557.1-201ENST00000540982 400 ntBASIC1.22□□□□□ -2.21
SNED1Q8TER0 Y_RNA.773-201ENST00000607168 90 ntBASIC1.22□□□□□ -2.21
SNED1Q8TER0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
SNED1Q8TER0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.22□□□□□ -2.21
SNED1Q8TER0 RNU6-1123P-201ENST00000362347 106 ntBASIC1.21□□□□□ -2.22
SNED1Q8TER0 SNORD115-2-201ENST00000362842 82 ntBASIC1.21□□□□□ -2.22
SNED1Q8TER0 Y_RNA.78-201ENST00000362970 110 ntBASIC1.21□□□□□ -2.22
SNED1Q8TER0 Y_RNA.115-201ENST00000363272 98 ntBASIC1.21□□□□□ -2.22
SNED1Q8TER0 Y_RNA.155-201ENST00000363632 101 ntBASIC1.21□□□□□ -2.22
SNED1Q8TER0 SNORD115-20-201ENST00000365099 82 ntBASIC1.21□□□□□ -2.22
SNED1Q8TER0 Y_RNA.470-201ENST00000384307 117 ntBASIC1.21□□□□□ -2.22
SNED1Q8TER0 SNORA26.6-201ENST00000391256 115 ntBASIC1.21□□□□□ -2.22
SNED1Q8TER0 AC027119.1-201ENST00000440877 241 ntBASIC1.21□□□□□ -2.22
SNED1Q8TER0 snoU13.16-201ENST00000459350 104 ntBASIC1.21□□□□□ -2.22
SNED1Q8TER0 AC113410.1-201ENST00000505029 247 ntBASIC1.21□□□□□ -2.22
SNED1Q8TER0 DEFB131E-201ENST00000532329 154 ntBASIC1.21□□□□□ -2.22
SNED1Q8TER0 AL020996.3-201ENST00000606617 222 ntBASIC1.21□□□□□ -2.22
SNED1Q8TER0 RNU6-363P-201ENST00000362895 105 ntBASIC1.2□□□□□ -2.22
SNED1Q8TER0 RNU4-36P-201ENST00000364294 144 ntBASIC1.2□□□□□ -2.22
SNED1Q8TER0 RNU6-1065P-201ENST00000384513 106 ntBASIC1.2□□□□□ -2.22
SNED1Q8TER0 MIR520C-201ENST00000385005 87 ntBASIC1.2□□□□□ -2.22
SNED1Q8TER0 RNU6-1190P-201ENST00000410811 104 ntBASIC1.2□□□□□ -2.22
SNED1Q8TER0 RPS3AP1-201ENST00000413190 320 ntBASIC1.2□□□□□ -2.22
SNED1Q8TER0 RNU7-43P-201ENST00000516554 64 ntBASIC1.2□□□□□ -2.22
SNED1Q8TER0 MIR3937-201ENST00000580135 106 ntBASIC1.2□□□□□ -2.22
SNED1Q8TER0 MIR4764-201ENST00000580680 88 ntBASIC1.2□□□□□ -2.22
SNED1Q8TER0 FAM71BP1-201ENST00000604431 523 ntBASIC1.2□□□□□ -2.22
SNED1Q8TER0 MIR8055-201ENST00000610739 97 ntBASIC1.2□□□□□ -2.22
SNED1Q8TER0 MIR6857-201ENST00000613267 93 ntBASIC1.2□□□□□ -2.22
SNED1Q8TER0 MIR1255B1-201ENST00000636325 63 ntBASIC1.2□□□□□ -2.22
SNED1Q8TER0 MIR302D-201ENST00000362275 68 ntBASIC1.19□□□□□ -2.22
SNED1Q8TER0 RNA5SP62-201ENST00000363457 110 ntBASIC1.19□□□□□ -2.22
SNED1Q8TER0 RNU6-640P-201ENST00000363693 105 ntBASIC1.19□□□□□ -2.22
SNED1Q8TER0 SNORA1.1-201ENST00000364671 133 ntBASIC1.19□□□□□ -2.22
SNED1Q8TER0 Y_RNA.430-201ENST00000384081 110 ntBASIC1.19□□□□□ -2.22
SNED1Q8TER0 RNU6-409P-201ENST00000384114 104 ntBASIC1.19□□□□□ -2.22
SNED1Q8TER0 SNORD77B-201ENST00000391112 67 ntBASIC1.19□□□□□ -2.22
SNED1Q8TER0 RNU6-733P-201ENST00000410759 104 ntBASIC1.19□□□□□ -2.22
SNED1Q8TER0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.19□□□□□ -2.22
SNED1Q8TER0 RPL30P7-201ENST00000479312 323 ntBASIC1.19□□□□□ -2.22
SNED1Q8TER0 RNU6-917P-201ENST00000516294 104 ntBASIC1.19□□□□□ -2.22
SNED1Q8TER0 MIR1273G-201ENST00000577677 100 ntBASIC1.19□□□□□ -2.22
SNED1Q8TER0 MIR548AE2-201ENST00000583456 67 ntBASIC1.19□□□□□ -2.22
SNED1Q8TER0 Y_RNA.818-201ENST00000618813 71 ntBASIC1.19□□□□□ -2.22
SNED1Q8TER0 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.19□□□□□ -2.22
SNED1Q8TER0 MIR26B-201ENST00000362251 77 ntBASIC1.18□□□□□ -2.22
SNED1Q8TER0 SNORD115-19-201ENST00000363098 82 ntBASIC1.18□□□□□ -2.22
SNED1Q8TER0 SNORD115-18-201ENST00000363293 82 ntBASIC1.18□□□□□ -2.22
SNED1Q8TER0 RNU6-1099P-201ENST00000363533 107 ntBASIC1.18□□□□□ -2.22
SNED1Q8TER0 RNU4-67P-201ENST00000364569 141 ntBASIC1.18□□□□□ -2.22
SNED1Q8TER0 SNORD115-17-201ENST00000364612 82 ntBASIC1.18□□□□□ -2.22
SNED1Q8TER0 RNA5SP259-201ENST00000365541 109 ntBASIC1.18□□□□□ -2.22
SNED1Q8TER0 MIR194-1-201ENST00000384892 85 ntBASIC1.18□□□□□ -2.22
SNED1Q8TER0 MIR605-201ENST00000385078 83 ntBASIC1.18□□□□□ -2.22
SNED1Q8TER0 RNU6-955P-201ENST00000410497 104 ntBASIC1.18□□□□□ -2.22
SNED1Q8TER0 SNORA7.5-201ENST00000410672 110 ntBASIC1.18□□□□□ -2.22
SNED1Q8TER0 RNU6-322P-201ENST00000516010 103 ntBASIC1.18□□□□□ -2.22
SNED1Q8TER0 RNU6-904P-201ENST00000516206 101 ntBASIC1.18□□□□□ -2.22
SNED1Q8TER0 MIR4714-201ENST00000580728 77 ntBASIC1.18□□□□□ -2.22
SNED1Q8TER0 MIR2052-201ENST00000636055 55 ntBASIC1.18□□□□□ -2.22
SNED1Q8TER0 MIR6841-201ENST00000637129 72 ntBASIC1.18□□□□□ -2.22
SNED1Q8TER0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SNED1Q8TER0 RNY3P2-201ENST00000362918 102 ntBASIC1.17□□□□□ -2.22
SNED1Q8TER0 SNORA25.8-201ENST00000364831 128 ntBASIC1.17□□□□□ -2.22
SNED1Q8TER0 RNU6-1131P-201ENST00000364955 107 ntBASIC1.17□□□□□ -2.22
SNED1Q8TER0 RNU6-294P-201ENST00000364999 102 ntBASIC1.17□□□□□ -2.22
SNED1Q8TER0 SNORA32-201ENST00000384072 121 ntBASIC1.17□□□□□ -2.22
SNED1Q8TER0 RNU6-616P-201ENST00000384353 107 ntBASIC1.17□□□□□ -2.22
SNED1Q8TER0 AL161935.2-201ENST00000414627 60 ntBASIC1.17□□□□□ -2.22
SNED1Q8TER0 MTATP8P2-201ENST00000435212 202 ntBASIC1.17□□□□□ -2.22
SNED1Q8TER0 AC245047.7-201ENST00000440265 293 ntBASIC1.17□□□□□ -2.22
SNED1Q8TER0 SCARNA23-201ENST00000516060 130 ntBASIC1.17□□□□□ -2.22
SNED1Q8TER0 SNORA72.7-201ENST00000516349 94 ntBASIC1.17□□□□□ -2.22
SNED1Q8TER0 Y_RNA.93-201ENST00000363066 109 ntBASIC1.16□□□□□ -2.22
SNED1Q8TER0 Y_RNA.360-201ENST00000365512 102 ntBASIC1.16□□□□□ -2.22
SNED1Q8TER0 RNU6-939P-201ENST00000384634 107 ntBASIC1.16□□□□□ -2.22
SNED1Q8TER0 MIR653-201ENST00000385279 96 ntBASIC1.16□□□□□ -2.22
SNED1Q8TER0 AL451046.2-201ENST00000403074 277 ntBASIC1.16□□□□□ -2.22
SNED1Q8TER0 Y_RNA.601-201ENST00000410500 113 ntBASIC1.16□□□□□ -2.22
SNED1Q8TER0 RNU6-521P-201ENST00000516663 105 ntBASIC1.16□□□□□ -2.22
SNED1Q8TER0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.16□□□□□ -2.22
SNED1Q8TER0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SNED1Q8TER0 Y_RNA.10-201ENST00000362371 110 ntBASIC1.15□□□□□ -2.22
SNED1Q8TER0 RNA5SP257-201ENST00000363023 116 ntBASIC1.15□□□□□ -2.22
SNED1Q8TER0 RNU6-49P-201ENST00000384256 107 ntBASIC1.15□□□□□ -2.22
SNED1Q8TER0 MIR577-201ENST00000385196 96 ntBASIC1.15□□□□□ -2.22
SNED1Q8TER0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.15□□□□□ -2.22
SNED1Q8TER0 RNA5SP395-201ENST00000516567 118 ntBASIC1.15□□□□□ -2.22
SNED1Q8TER0 AL590095.2-201ENST00000604136 117 ntBASIC1.15□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms