Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 RNU6-291P-201ENST00000384720 107 ntBASIC0.1□□□□□ -2.39
RPUSD3Q6P087 RNA5SP47-201ENST00000517230 109 ntBASIC0.1□□□□□ -2.39
RPUSD3Q6P087 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
RPUSD3Q6P087 AL360085.1-201ENST00000604713 532 ntBASIC0.1□□□□□ -2.39
RPUSD3Q6P087 MTND5P32-201ENST00000560711 1802 ntBASIC0.1□□□□□ -2.39
RPUSD3Q6P087 Y_RNA.65-201ENST00000362846 100 ntBASIC0.09□□□□□ -2.4
RPUSD3Q6P087 RNA5SP144-201ENST00000410846 116 ntBASIC0.09□□□□□ -2.4
RPUSD3Q6P087 Y_RNA.626-201ENST00000411288 95 ntBASIC0.09□□□□□ -2.4
RPUSD3Q6P087 RNU7-35P-201ENST00000517174 62 ntBASIC0.09□□□□□ -2.4
RPUSD3Q6P087 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
RPUSD3Q6P087 MIR5190-201ENST00000581537 80 ntBASIC0.09□□□□□ -2.4
RPUSD3Q6P087 AC067863.3-201ENST00000624172 122 ntBASIC0.09□□□□□ -2.4
RPUSD3Q6P087 Y_RNA.20-201ENST00000362479 113 ntBASIC0.08□□□□□ -2.4
RPUSD3Q6P087 Y_RNA.75-201ENST00000362927 97 ntBASIC0.08□□□□□ -2.4
RPUSD3Q6P087 RNU6-815P-201ENST00000384080 113 ntBASIC0.08□□□□□ -2.4
RPUSD3Q6P087 SNORD28-201ENST00000384706 75 ntBASIC0.08□□□□□ -2.4
RPUSD3Q6P087 MTATP6P21-201ENST00000440681 189 ntBASIC0.08□□□□□ -2.4
RPUSD3Q6P087 RNU4-71P-201ENST00000516258 113 ntBASIC0.08□□□□□ -2.4
RPUSD3Q6P087 SNORA25.16-201ENST00000516741 121 ntBASIC0.08□□□□□ -2.4
RPUSD3Q6P087 MIR4768-201ENST00000585270 74 ntBASIC0.08□□□□□ -2.4
RPUSD3Q6P087 MIR101-2-201ENST00000362195 79 ntBASIC0.07□□□□□ -2.4
RPUSD3Q6P087 RNU6-923P-201ENST00000364753 107 ntBASIC0.07□□□□□ -2.4
RPUSD3Q6P087 Y_RNA.412-201ENST00000384001 104 ntBASIC0.07□□□□□ -2.4
RPUSD3Q6P087 SNORD58.1-201ENST00000391313 66 ntBASIC0.07□□□□□ -2.4
RPUSD3Q6P087 AC096949.1-201ENST00000412047 152 ntBASIC0.07□□□□□ -2.4
RPUSD3Q6P087 SUMO1P3-201ENST00000439961 304 ntBASIC0.07□□□□□ -2.4
RPUSD3Q6P087 Y_RNA.660-201ENST00000516002 120 ntBASIC0.07□□□□□ -2.4
RPUSD3Q6P087 RNA5SP33-201ENST00000516687 98 ntBASIC0.07□□□□□ -2.4
RPUSD3Q6P087 AC011603.4-201ENST00000611325 277 ntBASIC0.07□□□□□ -2.4
RPUSD3Q6P087 MIR7107-201ENST00000611489 80 ntBASIC0.07□□□□□ -2.4
RPUSD3Q6P087 SNORD115-2-201ENST00000362842 82 ntBASIC0.06□□□□□ -2.4
RPUSD3Q6P087 SNORA42.1-201ENST00000363515 137 ntBASIC0.06□□□□□ -2.4
RPUSD3Q6P087 SNORD115-20-201ENST00000365099 82 ntBASIC0.06□□□□□ -2.4
RPUSD3Q6P087 Y_RNA.350-201ENST00000365409 98 ntBASIC0.06□□□□□ -2.4
RPUSD3Q6P087 MTND2P23-201ENST00000422990 651 ntBASIC0.06□□□□□ -2.4
RPUSD3Q6P087 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.06□□□□□ -2.4
RPUSD3Q6P087 RNA5SP285-201ENST00000516619 119 ntBASIC0.06□□□□□ -2.4
RPUSD3Q6P087 MTND5P34-201ENST00000568888 325 ntBASIC0.06□□□□□ -2.4
RPUSD3Q6P087 Y_RNA.171-201ENST00000363760 102 ntBASIC0.05□□□□□ -2.4
RPUSD3Q6P087 MIR548H2-201ENST00000408874 88 ntBASIC0.05□□□□□ -2.4
RPUSD3Q6P087 MRPS18CP4-201ENST00000535821 231 ntBASIC0.05□□□□□ -2.4
RPUSD3Q6P087 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.05□□□□□ -2.4
RPUSD3Q6P087 MIR329-2-201ENST00000385029 84 ntBASIC0.04□□□□□ -2.4
RPUSD3Q6P087 MTCYBP9-201ENST00000431021 303 ntBASIC0.04□□□□□ -2.4
RPUSD3Q6P087 AC069271.1-201ENST00000445577 156 ntBASIC0.04□□□□□ -2.4
RPUSD3Q6P087 RNA5SP395-201ENST00000516567 118 ntBASIC0.04□□□□□ -2.4
RPUSD3Q6P087 MIR4308-201ENST00000580634 81 ntBASIC0.04□□□□□ -2.4
RPUSD3Q6P087 AC098479.1-201ENST00000609225 154 ntBASIC0.04□□□□□ -2.4
RPUSD3Q6P087 AC244669.1-204ENST00000621564 178 ntBASIC0.04□□□□□ -2.4
RPUSD3Q6P087 RNA5SP133-201ENST00000363368 119 ntBASIC0.03□□□□□ -2.4
RPUSD3Q6P087 RNU6-690P-201ENST00000365242 106 ntBASIC0.03□□□□□ -2.4
RPUSD3Q6P087 RNU6-1126P-201ENST00000384002 107 ntBASIC0.03□□□□□ -2.4
RPUSD3Q6P087 RNU6-1258P-201ENST00000516911 111 ntBASIC0.03□□□□□ -2.4
RPUSD3Q6P087 Y_RNA.52-201ENST00000362760 96 ntBASIC0.02□□□□□ -2.41
RPUSD3Q6P087 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
RPUSD3Q6P087 SNORA2A-201ENST00000383885 135 ntBASIC0.02□□□□□ -2.41
RPUSD3Q6P087 MIR610-201ENST00000385139 96 ntBASIC0.02□□□□□ -2.41
RPUSD3Q6P087 AC107027.2-201ENST00000512197 115 ntBASIC0.02□□□□□ -2.41
RPUSD3Q6P087 RNU6-531P-201ENST00000516694 104 ntBASIC0.02□□□□□ -2.41
RPUSD3Q6P087 RNU7-10P-201ENST00000607194 63 ntBASIC0.02□□□□□ -2.41
RPUSD3Q6P087 Y_RNA.56-201ENST00000362798 112 ntBASIC0.01□□□□□ -2.41
RPUSD3Q6P087 RNA5SP214-201ENST00000363378 118 ntBASIC0.01□□□□□ -2.41
RPUSD3Q6P087 SNORD114-10-201ENST00000363409 72 ntBASIC0.01□□□□□ -2.41
RPUSD3Q6P087 Y_RNA.178-201ENST00000363832 102 ntBASIC0.01□□□□□ -2.41
RPUSD3Q6P087 RNU6-818P-201ENST00000364837 108 ntBASIC0.01□□□□□ -2.41
RPUSD3Q6P087 Y_RNA.337-201ENST00000365312 102 ntBASIC0.01□□□□□ -2.41
RPUSD3Q6P087 Y_RNA.423-201ENST00000384057 113 ntBASIC0.01□□□□□ -2.41
RPUSD3Q6P087 Y_RNA.435-201ENST00000384095 112 ntBASIC0.01□□□□□ -2.41
RPUSD3Q6P087 TUG1_4.1-201ENST00000619464 181 ntBASIC0.01□□□□□ -2.41
RPUSD3Q6P087 U6.106-201ENST00000636360 105 ntBASIC0.01□□□□□ -2.41
RPUSD3Q6P087 SNORD114-9-201ENST00000364370 72 ntBASIC0□□□□□ -2.41
RPUSD3Q6P087 RNU6-312P-201ENST00000364629 107 ntBASIC0□□□□□ -2.41
RPUSD3Q6P087 SNORA20.1-201ENST00000364790 130 ntBASIC0□□□□□ -2.41
RPUSD3Q6P087 Y_RNA.299-201ENST00000364973 94 ntBASIC0□□□□□ -2.41
RPUSD3Q6P087 Y_RNA.362-201ENST00000365518 110 ntBASIC0□□□□□ -2.41
RPUSD3Q6P087 RNU6-756P-201ENST00000383997 107 ntBASIC0□□□□□ -2.41
RPUSD3Q6P087 Y_RNA.470-201ENST00000384307 117 ntBASIC0□□□□□ -2.41
RPUSD3Q6P087 Y_RNA.668-201ENST00000516233 93 ntBASIC0□□□□□ -2.41
RPUSD3Q6P087 MIR4305-201ENST00000583252 102 ntBASIC0□□□□□ -2.41
RPUSD3Q6P087 MIR4290-201ENST00000583807 95 ntBASIC0□□□□□ -2.41
RPUSD3Q6P087 AC062037.2-201ENST00000610137 73 ntBASIC0□□□□□ -2.41
RPUSD3Q6P087 MIR6755-201ENST00000619993 66 ntBASIC0□□□□□ -2.41
RPUSD3Q6P087 U6.109-201ENST00000636749 87 ntBASIC0□□□□□ -2.41
RPUSD3Q6P087 MIR371B-201ENST00000638082 66 ntBASIC0□□□□□ -2.41
RPUSD3Q6P087 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.01□□□□□ -2.41
RPUSD3Q6P087 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.01□□□□□ -2.41
RPUSD3Q6P087 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.01□□□□□ -2.41
RPUSD3Q6P087 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.01□□□□□ -2.41
RPUSD3Q6P087 AC138869.1-201ENST00000568623 124 ntBASIC-0.01□□□□□ -2.41
RPUSD3Q6P087 MIR548H5-201ENST00000580314 60 ntBASIC-0.01□□□□□ -2.41
RPUSD3Q6P087 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.02□□□□□ -2.41
RPUSD3Q6P087 SNORD18B-201ENST00000365659 72 ntBASIC-0.02□□□□□ -2.41
RPUSD3Q6P087 SNORA32-201ENST00000384072 121 ntBASIC-0.02□□□□□ -2.41
RPUSD3Q6P087 SNORA75.5-201ENST00000391291 81 ntBASIC-0.02□□□□□ -2.41
RPUSD3Q6P087 MIR892B-201ENST00000401279 77 ntBASIC-0.02□□□□□ -2.41
RPUSD3Q6P087 MIR548L-201ENST00000408303 86 ntBASIC-0.02□□□□□ -2.41
RPUSD3Q6P087 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.02□□□□□ -2.41
RPUSD3Q6P087 MIR6759-201ENST00000638110 65 ntBASIC-0.02□□□□□ -2.41
RPUSD3Q6P087 MIR411-201ENST00000362239 96 ntBASIC-0.03□□□□□ -2.41
RPUSD3Q6P087 RNU6-302P-201ENST00000365249 107 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 282.3 ms