Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.14□□□□□ -2.43
PKNOX1P55347 SNORD115-2-201ENST00000362842 82 ntBASIC-0.14□□□□□ -2.43
PKNOX1P55347 RNU6-726P-201ENST00000364680 107 ntBASIC-0.14□□□□□ -2.43
PKNOX1P55347 RNU6-702P-201ENST00000364982 107 ntBASIC-0.14□□□□□ -2.43
PKNOX1P55347 SNORD115-20-201ENST00000365099 82 ntBASIC-0.14□□□□□ -2.43
PKNOX1P55347 SNORA32-201ENST00000384072 121 ntBASIC-0.14□□□□□ -2.43
PKNOX1P55347 MIR593-201ENST00000384856 100 ntBASIC-0.14□□□□□ -2.43
PKNOX1P55347 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.14□□□□□ -2.43
PKNOX1P55347 RNU7-137P-201ENST00000516788 62 ntBASIC-0.14□□□□□ -2.43
PKNOX1P55347 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.14□□□□□ -2.43
PKNOX1P55347 MIR4743-201ENST00000584576 69 ntBASIC-0.14□□□□□ -2.43
PKNOX1P55347 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.15□□□□□ -2.43
PKNOX1P55347 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.15□□□□□ -2.43
PKNOX1P55347 SNORD115-24-201ENST00000363528 82 ntBASIC-0.15□□□□□ -2.43
PKNOX1P55347 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.15□□□□□ -2.43
PKNOX1P55347 RNY4P28-201ENST00000365281 93 ntBASIC-0.15□□□□□ -2.43
PKNOX1P55347 AC244505.6-201ENST00000452829 130 ntBASIC-0.15□□□□□ -2.43
PKNOX1P55347 RNA5SP33-201ENST00000516687 98 ntBASIC-0.15□□□□□ -2.43
PKNOX1P55347 RNA5SP330-201ENST00000517096 96 ntBASIC-0.15□□□□□ -2.43
PKNOX1P55347 AL359881.1-201ENST00000602916 267 ntBASIC-0.15□□□□□ -2.43
PKNOX1P55347 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.16□□□□□ -2.44
PKNOX1P55347 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.16□□□□□ -2.44
PKNOX1P55347 SNORA25.7-201ENST00000364375 127 ntBASIC-0.16□□□□□ -2.44
PKNOX1P55347 RNU6-302P-201ENST00000365249 107 ntBASIC-0.16□□□□□ -2.44
PKNOX1P55347 RNU2-38P-201ENST00000410856 79 ntBASIC-0.16□□□□□ -2.44
PKNOX1P55347 AL022718.1-201ENST00000412004 84 ntBASIC-0.16□□□□□ -2.44
PKNOX1P55347 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.16□□□□□ -2.44
PKNOX1P55347 RNA5SP236-201ENST00000516169 116 ntBASIC-0.16□□□□□ -2.44
PKNOX1P55347 SNORD67.1-201ENST00000516618 108 ntBASIC-0.16□□□□□ -2.44
PKNOX1P55347 RNU6-782P-201ENST00000516852 104 ntBASIC-0.16□□□□□ -2.44
PKNOX1P55347 MIR4308-201ENST00000580634 81 ntBASIC-0.16□□□□□ -2.44
PKNOX1P55347 AC006504.6-201ENST00000590142 199 ntBASIC-0.16□□□□□ -2.44
PKNOX1P55347 AL162376.1-201ENST00000624117 175 ntBASIC-0.16□□□□□ -2.44
PKNOX1P55347 MIR101-2-201ENST00000362195 79 ntBASIC-0.17□□□□□ -2.44
PKNOX1P55347 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.17□□□□□ -2.44
PKNOX1P55347 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.17□□□□□ -2.44
PKNOX1P55347 RNU4-70P-201ENST00000384579 139 ntBASIC-0.17□□□□□ -2.44
PKNOX1P55347 RNU7-161P-201ENST00000517289 62 ntBASIC-0.17□□□□□ -2.44
PKNOX1P55347 MIR548AE2-201ENST00000583456 67 ntBASIC-0.17□□□□□ -2.44
PKNOX1P55347 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.17□□□□□ -2.44
PKNOX1P55347 AC098479.1-201ENST00000609225 154 ntBASIC-0.17□□□□□ -2.44
PKNOX1P55347 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.18□□□□□ -2.44
PKNOX1P55347 SNORA32.1-201ENST00000364514 115 ntBASIC-0.18□□□□□ -2.44
PKNOX1P55347 RNU6-923P-201ENST00000364753 107 ntBASIC-0.18□□□□□ -2.44
PKNOX1P55347 RNY1P2-201ENST00000364820 117 ntBASIC-0.18□□□□□ -2.44
PKNOX1P55347 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.18□□□□□ -2.44
PKNOX1P55347 MIR501-201ENST00000390204 84 ntBASIC-0.18□□□□□ -2.44
PKNOX1P55347 MTND1P19-201ENST00000511780 315 ntBASIC-0.18□□□□□ -2.44
PKNOX1P55347 AL360085.1-201ENST00000604713 532 ntBASIC-0.18□□□□□ -2.44
PKNOX1P55347 SNORA70.25-201ENST00000612741 95 ntBASIC-0.18□□□□□ -2.44
PKNOX1P55347 MIR7111-201ENST00000619751 72 ntBASIC-0.18□□□□□ -2.44
PKNOX1P55347 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.19□□□□□ -2.44
PKNOX1P55347 RNU6-161P-201ENST00000363051 106 ntBASIC-0.19□□□□□ -2.44
PKNOX1P55347 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.19□□□□□ -2.44
PKNOX1P55347 RNU6-275P-201ENST00000364910 107 ntBASIC-0.19□□□□□ -2.44
PKNOX1P55347 RNU6-756P-201ENST00000383997 107 ntBASIC-0.19□□□□□ -2.44
PKNOX1P55347 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.19□□□□□ -2.44
PKNOX1P55347 RNU6V-201ENST00000384105 107 ntBASIC-0.19□□□□□ -2.44
PKNOX1P55347 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.19□□□□□ -2.44
PKNOX1P55347 MIR1270-201ENST00000459320 83 ntBASIC-0.19□□□□□ -2.44
PKNOX1P55347 RNU2-35P-201ENST00000516446 142 ntBASIC-0.19□□□□□ -2.44
PKNOX1P55347 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
PKNOX1P55347 AC138869.1-201ENST00000568623 124 ntBASIC-0.19□□□□□ -2.44
PKNOX1P55347 SNORD114-10-201ENST00000363409 72 ntBASIC-0.2□□□□□ -2.44
PKNOX1P55347 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.2□□□□□ -2.44
PKNOX1P55347 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.2□□□□□ -2.44
PKNOX1P55347 MIR892B-201ENST00000401279 77 ntBASIC-0.2□□□□□ -2.44
PKNOX1P55347 SNORD127-201ENST00000458892 86 ntBASIC-0.2□□□□□ -2.44
PKNOX1P55347 AC105081.1-201ENST00000617727 106 ntBASIC-0.2□□□□□ -2.44
PKNOX1P55347 MIR1295B-201ENST00000636144 60 ntBASIC-0.2□□□□□ -2.44
PKNOX1P55347 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.2□□□□□ -2.44
PKNOX1P55347 RNA5SP403-201ENST00000363598 108 ntBASIC-0.21□□□□□ -2.44
PKNOX1P55347 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.21□□□□□ -2.44
PKNOX1P55347 RNU6-929P-201ENST00000384429 107 ntBASIC-0.21□□□□□ -2.44
PKNOX1P55347 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.21□□□□□ -2.44
PKNOX1P55347 MIR548H3-201ENST00000408771 118 ntBASIC-0.21□□□□□ -2.44
PKNOX1P55347 MTND2P23-201ENST00000422990 651 ntBASIC-0.21□□□□□ -2.44
PKNOX1P55347 RNU7-104P-201ENST00000459398 79 ntBASIC-0.21□□□□□ -2.44
PKNOX1P55347 MIR548AD-201ENST00000584780 82 ntBASIC-0.21□□□□□ -2.44
PKNOX1P55347 RNU6-690P-201ENST00000365242 106 ntBASIC-0.22□□□□□ -2.44
PKNOX1P55347 MIR548L-201ENST00000408303 86 ntBASIC-0.22□□□□□ -2.44
PKNOX1P55347 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.22□□□□□ -2.44
PKNOX1P55347 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.22□□□□□ -2.44
PKNOX1P55347 AL117187.1-201ENST00000555482 181 ntBASIC-0.22□□□□□ -2.44
PKNOX1P55347 MIR6779-201ENST00000617283 64 ntBASIC-0.22□□□□□ -2.44
PKNOX1P55347 U6.106-201ENST00000636360 105 ntBASIC-0.22□□□□□ -2.44
PKNOX1P55347 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.23□□□□□ -2.45
PKNOX1P55347 RNU6-429P-201ENST00000384582 108 ntBASIC-0.23□□□□□ -2.45
PKNOX1P55347 SNORD41.1-201ENST00000391000 69 ntBASIC-0.23□□□□□ -2.45
PKNOX1P55347 SNORD58.1-201ENST00000391313 66 ntBASIC-0.23□□□□□ -2.45
PKNOX1P55347 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.23□□□□□ -2.45
PKNOX1P55347 MIR5706-201ENST00000579841 80 ntBASIC-0.23□□□□□ -2.45
PKNOX1P55347 MIR548H5-201ENST00000580314 60 ntBASIC-0.23□□□□□ -2.45
PKNOX1P55347 AL109933.3-201ENST00000619095 188 ntBASIC-0.23□□□□□ -2.45
PKNOX1P55347 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.24□□□□□ -2.45
PKNOX1P55347 SNORD27-201ENST00000363981 72 ntBASIC-0.24□□□□□ -2.45
PKNOX1P55347 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.24□□□□□ -2.45
PKNOX1P55347 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.24□□□□□ -2.45
PKNOX1P55347 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.24□□□□□ -2.45
PKNOX1P55347 RNU6-768P-201ENST00000384683 107 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 248.2 ms