Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RNU6-893P-201ENST00000458841 100 ntBASIC0.63□□□□□ -2.31
PDX1P52945 RNU7-123P-201ENST00000515911 60 ntBASIC0.63□□□□□ -2.31
PDX1P52945 MTND5P41-201ENST00000517498 206 ntBASIC0.63□□□□□ -2.31
PDX1P52945 AC133485.4-201ENST00000561835 220 ntBASIC0.63□□□□□ -2.31
PDX1P52945 AC138907.4-201ENST00000570107 226 ntBASIC0.63□□□□□ -2.31
PDX1P52945 MIR3144-201ENST00000579460 79 ntBASIC0.63□□□□□ -2.31
PDX1P52945 MIR3612-201ENST00000579753 87 ntBASIC0.63□□□□□ -2.31
PDX1P52945 AL590095.2-201ENST00000604136 117 ntBASIC0.63□□□□□ -2.31
PDX1P52945 AC108081.1-201ENST00000604358 221 ntBASIC0.63□□□□□ -2.31
PDX1P52945 AC021443.1-201ENST00000604478 211 ntBASIC0.63□□□□□ -2.31
PDX1P52945 AL589743.1-201ENST00000551932 2712 ntBASIC0.63□□□□□ -2.31
PDX1P52945 Y_RNA.42-201ENST00000362660 108 ntBASIC0.62□□□□□ -2.31
PDX1P52945 Y_RNA.366-201ENST00000365540 102 ntBASIC0.62□□□□□ -2.31
PDX1P52945 RNU6-110P-201ENST00000384508 104 ntBASIC0.62□□□□□ -2.31
PDX1P52945 AL603914.1-201ENST00000401964 204 ntBASIC0.62□□□□□ -2.31
PDX1P52945 MIR1270-201ENST00000459320 83 ntBASIC0.62□□□□□ -2.31
PDX1P52945 SNORA25.12-201ENST00000516202 82 ntBASIC0.62□□□□□ -2.31
PDX1P52945 RNA5SP33-201ENST00000516687 98 ntBASIC0.62□□□□□ -2.31
PDX1P52945 RNU7-35P-201ENST00000517174 62 ntBASIC0.62□□□□□ -2.31
PDX1P52945 MIR3671-201ENST00000580455 88 ntBASIC0.62□□□□□ -2.31
PDX1P52945 AC090897.1-201ENST00000580909 226 ntBASIC0.62□□□□□ -2.31
PDX1P52945 MIR548AE2-201ENST00000583456 67 ntBASIC0.62□□□□□ -2.31
PDX1P52945 AC098479.1-201ENST00000609225 154 ntBASIC0.62□□□□□ -2.31
PDX1P52945 SNORD115-2-201ENST00000362842 82 ntBASIC0.61□□□□□ -2.31
PDX1P52945 SNORD115-20-201ENST00000365099 82 ntBASIC0.61□□□□□ -2.31
PDX1P52945 Y_RNA.617-201ENST00000410920 90 ntBASIC0.61□□□□□ -2.31
PDX1P52945 RNU6-1086P-201ENST00000410930 100 ntBASIC0.61□□□□□ -2.31
PDX1P52945 AC108059.2-201ENST00000434626 151 ntBASIC0.61□□□□□ -2.31
PDX1P52945 RNU7-164P-201ENST00000459221 62 ntBASIC0.61□□□□□ -2.31
PDX1P52945 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.61□□□□□ -2.31
PDX1P52945 AC021753.1-201ENST00000635724 168 ntBASIC0.61□□□□□ -2.31
PDX1P52945 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
PDX1P52945 MIR18A-201ENST00000362310 71 ntBASIC0.6□□□□□ -2.31
PDX1P52945 Y_RNA.13-201ENST00000362403 112 ntBASIC0.6□□□□□ -2.31
PDX1P52945 RNA5SP347-201ENST00000362445 119 ntBASIC0.6□□□□□ -2.31
PDX1P52945 RNU6-403P-201ENST00000363163 104 ntBASIC0.6□□□□□ -2.31
PDX1P52945 SNORD114-23-201ENST00000363536 72 ntBASIC0.6□□□□□ -2.31
PDX1P52945 RNU6-915P-201ENST00000364943 103 ntBASIC0.6□□□□□ -2.31
PDX1P52945 SNORD18B-201ENST00000365659 72 ntBASIC0.6□□□□□ -2.31
PDX1P52945 SNORA36.2-201ENST00000384004 127 ntBASIC0.6□□□□□ -2.31
PDX1P52945 Y_RNA.531-201ENST00000384589 121 ntBASIC0.6□□□□□ -2.31
PDX1P52945 RNU6-447P-201ENST00000410293 104 ntBASIC0.6□□□□□ -2.31
PDX1P52945 RNU6-1118P-201ENST00000410382 104 ntBASIC0.6□□□□□ -2.31
PDX1P52945 RNU6-1076P-201ENST00000410397 104 ntBASIC0.6□□□□□ -2.31
PDX1P52945 RNU6-355P-201ENST00000410427 104 ntBASIC0.6□□□□□ -2.31
PDX1P52945 RNU6-791P-201ENST00000410467 104 ntBASIC0.6□□□□□ -2.31
PDX1P52945 RNU6-705P-201ENST00000410601 104 ntBASIC0.6□□□□□ -2.31
PDX1P52945 RNU6-1100P-201ENST00000410691 104 ntBASIC0.6□□□□□ -2.31
PDX1P52945 RNU6-860P-201ENST00000410860 104 ntBASIC0.6□□□□□ -2.31
PDX1P52945 RNU6-1217P-201ENST00000411276 104 ntBASIC0.6□□□□□ -2.31
PDX1P52945 RNU6-785P-201ENST00000411324 104 ntBASIC0.6□□□□□ -2.31
PDX1P52945 RNU5E-3P-201ENST00000515913 68 ntBASIC0.6□□□□□ -2.31
PDX1P52945 RNU7-79P-201ENST00000516082 62 ntBASIC0.6□□□□□ -2.31
PDX1P52945 AC022523.2-201ENST00000561045 150 ntBASIC0.6□□□□□ -2.31
PDX1P52945 MIR1273G-201ENST00000577677 100 ntBASIC0.6□□□□□ -2.31
PDX1P52945 U6.90-201ENST00000614007 104 ntBASIC0.6□□□□□ -2.31
PDX1P52945 U6.70-201ENST00000620287 104 ntBASIC0.6□□□□□ -2.31
PDX1P52945 Y_RNA.555-201ENST00000384673 110 ntBASIC0.59□□□□□ -2.31
PDX1P52945 SNORD100-201ENST00000408573 76 ntBASIC0.59□□□□□ -2.31
PDX1P52945 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.59□□□□□ -2.31
PDX1P52945 AC098934.3-201ENST00000430450 190 ntBASIC0.59□□□□□ -2.31
PDX1P52945 MIR4491-201ENST00000581087 68 ntBASIC0.59□□□□□ -2.31
PDX1P52945 AL359881.1-201ENST00000602916 267 ntBASIC0.59□□□□□ -2.31
PDX1P52945 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
PDX1P52945 Y_RNA.298-201ENST00000364960 107 ntBASIC0.58□□□□□ -2.32
PDX1P52945 SNORA72.6-201ENST00000384520 129 ntBASIC0.58□□□□□ -2.32
PDX1P52945 AC002350.1-201ENST00000490759 375 ntBASIC0.58□□□□□ -2.32
PDX1P52945 RNY4P20-201ENST00000516678 93 ntBASIC0.58□□□□□ -2.32
PDX1P52945 Y_RNA.258-201ENST00000364613 105 ntBASIC0.57□□□□□ -2.32
PDX1P52945 RNU6-945P-201ENST00000383947 107 ntBASIC0.57□□□□□ -2.32
PDX1P52945 Y_RNA.420-201ENST00000384043 110 ntBASIC0.57□□□□□ -2.32
PDX1P52945 MIR569-201ENST00000385228 96 ntBASIC0.57□□□□□ -2.32
PDX1P52945 MIR140-201ENST00000385282 100 ntBASIC0.57□□□□□ -2.32
PDX1P52945 MIR513C-201ENST00000401352 84 ntBASIC0.57□□□□□ -2.32
PDX1P52945 AC092628.1-201ENST00000436250 252 ntBASIC0.57□□□□□ -2.32
PDX1P52945 SNORD67.1-201ENST00000516618 108 ntBASIC0.57□□□□□ -2.32
PDX1P52945 SNORA25.16-201ENST00000516741 121 ntBASIC0.57□□□□□ -2.32
PDX1P52945 RNU6-448P-201ENST00000517052 107 ntBASIC0.57□□□□□ -2.32
PDX1P52945 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.57□□□□□ -2.32
PDX1P52945 MIR6082-201ENST00000613604 109 ntBASIC0.57□□□□□ -2.32
PDX1P52945 AC243829.3-201ENST00000622177 108 ntBASIC0.57□□□□□ -2.32
PDX1P52945 Y_RNA.215-201ENST00000364204 112 ntBASIC0.56□□□□□ -2.32
PDX1P52945 Y_RNA.400-201ENST00000383963 111 ntBASIC0.56□□□□□ -2.32
PDX1P52945 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
PDX1P52945 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
PDX1P52945 RNA5SP272-201ENST00000516095 111 ntBASIC0.56□□□□□ -2.32
PDX1P52945 RNU7-137P-201ENST00000516788 62 ntBASIC0.56□□□□□ -2.32
PDX1P52945 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.56□□□□□ -2.32
PDX1P52945 IGKV1-22-201ENST00000524313 326 ntBASIC0.56□□□□□ -2.32
PDX1P52945 MIR548X2-201ENST00000579776 100 ntBASIC0.56□□□□□ -2.32
PDX1P52945 AC010487.4-201ENST00000637027 61 ntBASIC0.56□□□□□ -2.32
PDX1P52945 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
PDX1P52945 Y_RNA.170-201ENST00000363746 110 ntBASIC0.55□□□□□ -2.32
PDX1P52945 Y_RNA.180-201ENST00000363867 113 ntBASIC0.55□□□□□ -2.32
PDX1P52945 Y_RNA.294-201ENST00000364916 102 ntBASIC0.55□□□□□ -2.32
PDX1P52945 RNA5SP330-201ENST00000517096 96 ntBASIC0.55□□□□□ -2.32
PDX1P52945 AP003327.1-201ENST00000529684 127 ntBASIC0.55□□□□□ -2.32
PDX1P52945 AL137067.1-201ENST00000615933 120 ntBASIC0.55□□□□□ -2.32
PDX1P52945 Y_RNA.30-201ENST00000362572 97 ntBASIC0.54□□□□□ -2.32
PDX1P52945 Y_RNA.374-201ENST00000365606 101 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms