Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RNU7-79P-201ENST00000516082 62 ntBASIC0.43□□□□□ -2.34
HMGCLP35914 RNU6-1194P-201ENST00000516208 104 ntBASIC0.43□□□□□ -2.34
HMGCLP35914 RNU6-229P-201ENST00000516614 102 ntBASIC0.43□□□□□ -2.34
HMGCLP35914 Y_RNA.584-201ENST00000391090 114 ntBASIC0.42□□□□□ -2.34
HMGCLP35914 AL022718.1-201ENST00000412004 84 ntBASIC0.42□□□□□ -2.34
HMGCLP35914 RNU7-113P-201ENST00000459273 62 ntBASIC0.42□□□□□ -2.34
HMGCLP35914 AC074198.2-201ENST00000508153 258 ntBASIC0.42□□□□□ -2.34
HMGCLP35914 uc_338.16-201ENST00000621804 95 ntBASIC0.42□□□□□ -2.34
HMGCLP35914 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.42□□□□□ -2.34
HMGCLP35914 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
HMGCLP35914 RNU6-690P-201ENST00000365242 106 ntBASIC0.41□□□□□ -2.34
HMGCLP35914 Y_RNA.366-201ENST00000365540 102 ntBASIC0.41□□□□□ -2.34
HMGCLP35914 MIR936-201ENST00000401264 98 ntBASIC0.41□□□□□ -2.34
HMGCLP35914 RNU6-794P-201ENST00000517261 64 ntBASIC0.41□□□□□ -2.34
HMGCLP35914 Y_RNA.13-201ENST00000362403 112 ntBASIC0.4□□□□□ -2.35
HMGCLP35914 RNU6-508P-201ENST00000363231 103 ntBASIC0.4□□□□□ -2.35
HMGCLP35914 RNU6-309P-201ENST00000364573 106 ntBASIC0.4□□□□□ -2.35
HMGCLP35914 Y_RNA.280-201ENST00000364765 112 ntBASIC0.4□□□□□ -2.35
HMGCLP35914 MIR613-201ENST00000385248 95 ntBASIC0.4□□□□□ -2.35
HMGCLP35914 Y_RNA.686-201ENST00000516548 134 ntBASIC0.4□□□□□ -2.35
HMGCLP35914 AC112693.2-201ENST00000556538 232 ntBASIC0.4□□□□□ -2.35
HMGCLP35914 MIR4711-201ENST00000578274 70 ntBASIC0.4□□□□□ -2.35
HMGCLP35914 Y_RNA.778-201ENST00000620203 90 ntBASIC0.4□□□□□ -2.35
HMGCLP35914 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
HMGCLP35914 RNU6-886P-201ENST00000384319 105 ntBASIC0.39□□□□□ -2.35
HMGCLP35914 RNA5SP193-201ENST00000410353 107 ntBASIC0.39□□□□□ -2.35
HMGCLP35914 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.39□□□□□ -2.35
HMGCLP35914 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.39□□□□□ -2.35
HMGCLP35914 RNA5SP436-201ENST00000516020 115 ntBASIC0.39□□□□□ -2.35
HMGCLP35914 RNU6-240P-201ENST00000516098 97 ntBASIC0.39□□□□□ -2.35
HMGCLP35914 RNU7-137P-201ENST00000516788 62 ntBASIC0.39□□□□□ -2.35
HMGCLP35914 RNA5SP94-201ENST00000516917 108 ntBASIC0.39□□□□□ -2.35
HMGCLP35914 RNU6-182P-201ENST00000516970 105 ntBASIC0.39□□□□□ -2.35
HMGCLP35914 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.39□□□□□ -2.35
HMGCLP35914 AC133485.4-201ENST00000561835 220 ntBASIC0.39□□□□□ -2.35
HMGCLP35914 AC138907.4-201ENST00000570107 226 ntBASIC0.39□□□□□ -2.35
HMGCLP35914 MIR3121-201ENST00000579680 77 ntBASIC0.39□□□□□ -2.35
HMGCLP35914 MIR548AE2-201ENST00000583456 67 ntBASIC0.39□□□□□ -2.35
HMGCLP35914 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.39□□□□□ -2.35
HMGCLP35914 AC243829.3-201ENST00000622177 108 ntBASIC0.39□□□□□ -2.35
HMGCLP35914 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.39□□□□□ -2.35
HMGCLP35914 Y_RNA.118-201ENST00000363300 101 ntBASIC0.38□□□□□ -2.35
HMGCLP35914 SNORD114-10-201ENST00000363409 72 ntBASIC0.38□□□□□ -2.35
HMGCLP35914 Y_RNA.298-201ENST00000364960 107 ntBASIC0.38□□□□□ -2.35
HMGCLP35914 SNORA36.2-201ENST00000384004 127 ntBASIC0.38□□□□□ -2.35
HMGCLP35914 Y_RNA.508-201ENST00000384502 114 ntBASIC0.38□□□□□ -2.35
HMGCLP35914 RNU7-123P-201ENST00000515911 60 ntBASIC0.38□□□□□ -2.35
HMGCLP35914 RNA5SP33-201ENST00000516687 98 ntBASIC0.38□□□□□ -2.35
HMGCLP35914 MIR3678-201ENST00000578455 94 ntBASIC0.38□□□□□ -2.35
HMGCLP35914 AL359881.1-201ENST00000602916 267 ntBASIC0.38□□□□□ -2.35
HMGCLP35914 AC021443.1-201ENST00000604478 211 ntBASIC0.38□□□□□ -2.35
HMGCLP35914 AP001340.1-201ENST00000624405 217 ntBASIC0.38□□□□□ -2.35
HMGCLP35914 MIR6828-201ENST00000636181 60 ntBASIC0.38□□□□□ -2.35
HMGCLP35914 Y_RNA.174-201ENST00000363781 105 ntBASIC0.37□□□□□ -2.35
HMGCLP35914 Y_RNA.299-201ENST00000364973 94 ntBASIC0.37□□□□□ -2.35
HMGCLP35914 RNU4-11P-201ENST00000365287 132 ntBASIC0.37□□□□□ -2.35
HMGCLP35914 RNU6-1130P-201ENST00000365434 107 ntBASIC0.37□□□□□ -2.35
HMGCLP35914 Y_RNA.617-201ENST00000410920 90 ntBASIC0.37□□□□□ -2.35
HMGCLP35914 Y_RNA.690-201ENST00000516603 95 ntBASIC0.37□□□□□ -2.35
HMGCLP35914 MIR6515-201ENST00000619843 57 ntBASIC0.37□□□□□ -2.35
HMGCLP35914 SNORA36.1-201ENST00000363424 132 ntBASIC0.36□□□□□ -2.35
HMGCLP35914 SNORD118-201ENST00000363593 134 ntBASIC0.36□□□□□ -2.35
HMGCLP35914 RNA5SP517-201ENST00000364724 117 ntBASIC0.36□□□□□ -2.35
HMGCLP35914 Y_RNA.355-201ENST00000365462 98 ntBASIC0.36□□□□□ -2.35
HMGCLP35914 RNU6-449P-201ENST00000383914 107 ntBASIC0.36□□□□□ -2.35
HMGCLP35914 Y_RNA.536-201ENST00000384621 113 ntBASIC0.36□□□□□ -2.35
HMGCLP35914 RNU6-291P-201ENST00000384720 107 ntBASIC0.36□□□□□ -2.35
HMGCLP35914 SNORD37.2-201ENST00000391075 66 ntBASIC0.36□□□□□ -2.35
HMGCLP35914 RNU4-69P-201ENST00000410677 143 ntBASIC0.36□□□□□ -2.35
HMGCLP35914 RNU7-164P-201ENST00000459221 62 ntBASIC0.36□□□□□ -2.35
HMGCLP35914 SNORA68.3-201ENST00000515906 83 ntBASIC0.36□□□□□ -2.35
HMGCLP35914 SNORA25.16-201ENST00000516741 121 ntBASIC0.36□□□□□ -2.35
HMGCLP35914 RNU6-135P-201ENST00000516769 101 ntBASIC0.36□□□□□ -2.35
HMGCLP35914 RNU6-1212P-201ENST00000517023 104 ntBASIC0.36□□□□□ -2.35
HMGCLP35914 MIR3144-201ENST00000579460 79 ntBASIC0.36□□□□□ -2.35
HMGCLP35914 AC108081.1-201ENST00000604358 221 ntBASIC0.36□□□□□ -2.35
HMGCLP35914 AC243829.6-201ENST00000612652 106 ntBASIC0.36□□□□□ -2.35
HMGCLP35914 MIRLET7D-201ENST00000362263 87 ntBASIC0.35□□□□□ -2.35
HMGCLP35914 Y_RNA.32-201ENST00000362589 110 ntBASIC0.35□□□□□ -2.35
HMGCLP35914 RNA5SP117-201ENST00000365294 118 ntBASIC0.35□□□□□ -2.35
HMGCLP35914 SNORD18B-201ENST00000365659 72 ntBASIC0.35□□□□□ -2.35
HMGCLP35914 Y_RNA.555-201ENST00000384673 110 ntBASIC0.35□□□□□ -2.35
HMGCLP35914 MIR518A1-201ENST00000385068 85 ntBASIC0.35□□□□□ -2.35
HMGCLP35914 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.35□□□□□ -2.35
HMGCLP35914 SNORA31.14-201ENST00000516728 116 ntBASIC0.35□□□□□ -2.35
HMGCLP35914 AC138749.4-201ENST00000563970 127 ntBASIC0.35□□□□□ -2.35
HMGCLP35914 AC098479.1-201ENST00000609225 154 ntBASIC0.35□□□□□ -2.35
HMGCLP35914 RNU6-403P-201ENST00000363163 104 ntBASIC0.34□□□□□ -2.36
HMGCLP35914 RNY1P2-201ENST00000364820 117 ntBASIC0.34□□□□□ -2.36
HMGCLP35914 SNORA8.2-201ENST00000384372 139 ntBASIC0.34□□□□□ -2.36
HMGCLP35914 MIR598-201ENST00000384868 97 ntBASIC0.34□□□□□ -2.36
HMGCLP35914 SNORD67.1-201ENST00000516618 108 ntBASIC0.34□□□□□ -2.36
HMGCLP35914 AC092634.7-201ENST00000621022 103 ntBASIC0.34□□□□□ -2.36
HMGCLP35914 AL589743.1-201ENST00000551932 2712 ntBASIC0.34□□□□□ -2.36
HMGCLP35914 AC090625.1-201ENST00000357130 210 ntBASIC0.33□□□□□ -2.36
HMGCLP35914 SNORD44.1-201ENST00000363202 61 ntBASIC0.33□□□□□ -2.36
HMGCLP35914 Y_RNA.180-201ENST00000363867 113 ntBASIC0.33□□□□□ -2.36
HMGCLP35914 RNU6-151P-201ENST00000364158 107 ntBASIC0.33□□□□□ -2.36
HMGCLP35914 VTRNA1-3-201ENST00000365645 89 ntBASIC0.33□□□□□ -2.36
HMGCLP35914 Y_RNA.400-201ENST00000383963 111 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms