Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 SNORD116-10-201ENST00000363791 102 ntBASIC1.75□□□□□ -2.13
CTGFP29279 RNU6-203P-201ENST00000384038 104 ntBASIC1.75□□□□□ -2.13
CTGFP29279 RNU6-42P-201ENST00000384165 107 ntBASIC1.75□□□□□ -2.13
CTGFP29279 MIR194-1-201ENST00000384892 85 ntBASIC1.75□□□□□ -2.13
CTGFP29279 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CTGFP29279 SNORA26.6-201ENST00000391256 115 ntBASIC1.75□□□□□ -2.13
CTGFP29279 RNA5SP489-201ENST00000410986 109 ntBASIC1.75□□□□□ -2.13
CTGFP29279 JTBP1-201ENST00000441314 247 ntBASIC1.75□□□□□ -2.13
CTGFP29279 AL450471.1-201ENST00000447509 127 ntBASIC1.75□□□□□ -2.13
CTGFP29279 AC087499.4-201ENST00000448505 178 ntBASIC1.75□□□□□ -2.13
CTGFP29279 SCARNA18B-201ENST00000458806 135 ntBASIC1.75□□□□□ -2.13
CTGFP29279 RNU1-98P-201ENST00000458992 160 ntBASIC1.75□□□□□ -2.13
CTGFP29279 RNU7-80P-201ENST00000459562 61 ntBASIC1.75□□□□□ -2.13
CTGFP29279 AC131280.1-202ENST00000624067 4211 ntBASIC1.74□□□□□ -2.13
CTGFP29279 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.74□□□□□ -2.13
CTGFP29279 Y_RNA.57-201ENST00000362806 113 ntBASIC1.74□□□□□ -2.13
CTGFP29279 SNORA1.1-201ENST00000364671 133 ntBASIC1.74□□□□□ -2.13
CTGFP29279 Y_RNA.430-201ENST00000384081 110 ntBASIC1.74□□□□□ -2.13
CTGFP29279 RNU6-439P-201ENST00000384188 106 ntBASIC1.74□□□□□ -2.13
CTGFP29279 RNU6-913P-201ENST00000390913 95 ntBASIC1.74□□□□□ -2.13
CTGFP29279 AL161935.2-201ENST00000414627 60 ntBASIC1.74□□□□□ -2.13
CTGFP29279 RNU6-917P-201ENST00000516294 104 ntBASIC1.74□□□□□ -2.13
CTGFP29279 RNU1-92P-201ENST00000517017 135 ntBASIC1.74□□□□□ -2.13
CTGFP29279 MIR3134-201ENST00000579433 74 ntBASIC1.74□□□□□ -2.13
CTGFP29279 AL353770.2-201ENST00000620024 78 ntBASIC1.74□□□□□ -2.13
CTGFP29279 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CTGFP29279 SNORA22.1-201ENST00000362701 134 ntBASIC1.73□□□□□ -2.13
CTGFP29279 RNU6-1244P-201ENST00000363614 108 ntBASIC1.73□□□□□ -2.13
CTGFP29279 RNU4-52P-201ENST00000384209 138 ntBASIC1.73□□□□□ -2.13
CTGFP29279 MIR517C-201ENST00000385103 95 ntBASIC1.73□□□□□ -2.13
CTGFP29279 MIR516B2-201ENST00000385190 85 ntBASIC1.73□□□□□ -2.13
CTGFP29279 MIR136-201ENST00000385207 82 ntBASIC1.73□□□□□ -2.13
CTGFP29279 HMGN2P38-201ENST00000423806 265 ntBASIC1.73□□□□□ -2.13
CTGFP29279 MIR4791-201ENST00000607666 84 ntBASIC1.73□□□□□ -2.13
CTGFP29279 AC105081.1-201ENST00000617727 106 ntBASIC1.73□□□□□ -2.13
CTGFP29279 MIR6841-201ENST00000637129 72 ntBASIC1.73□□□□□ -2.13
CTGFP29279 MIR526A1-201ENST00000384897 85 ntBASIC1.72□□□□□ -2.13
CTGFP29279 SNORD28B-201ENST00000390993 75 ntBASIC1.72□□□□□ -2.13
CTGFP29279 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.72□□□□□ -2.13
CTGFP29279 RPS27P21-201ENST00000486977 252 ntBASIC1.72□□□□□ -2.13
CTGFP29279 AC114801.3-201ENST00000510231 177 ntBASIC1.72□□□□□ -2.13
CTGFP29279 RNU6-958P-201ENST00000516995 106 ntBASIC1.72□□□□□ -2.13
CTGFP29279 SNORA31.24-201ENST00000517232 57 ntBASIC1.72□□□□□ -2.13
CTGFP29279 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.72□□□□□ -2.13
CTGFP29279 AC140658.3-201ENST00000567603 271 ntBASIC1.72□□□□□ -2.13
CTGFP29279 AL513043.2-201ENST00000573941 143 ntBASIC1.72□□□□□ -2.13
CTGFP29279 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.72□□□□□ -2.13
CTGFP29279 AC022709.1-201ENST00000615967 87 ntBASIC1.72□□□□□ -2.13
CTGFP29279 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
CTGFP29279 MIR206-201ENST00000384872 86 ntBASIC1.71□□□□□ -2.14
CTGFP29279 MIR1267-201ENST00000408723 78 ntBASIC1.71□□□□□ -2.14
CTGFP29279 AL356379.1-201ENST00000414105 126 ntBASIC1.71□□□□□ -2.14
CTGFP29279 AL354695.1-201ENST00000427935 228 ntBASIC1.71□□□□□ -2.14
CTGFP29279 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
CTGFP29279 SNORD115-2-201ENST00000362842 82 ntBASIC1.7□□□□□ -2.14
CTGFP29279 SNORD115-20-201ENST00000365099 82 ntBASIC1.7□□□□□ -2.14
CTGFP29279 Y_RNA.532-201ENST00000384590 113 ntBASIC1.7□□□□□ -2.14
CTGFP29279 MIR181B2-201ENST00000385004 89 ntBASIC1.7□□□□□ -2.14
CTGFP29279 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CTGFP29279 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CTGFP29279 SUMO2P12-201ENST00000405924 140 ntBASIC1.7□□□□□ -2.14
CTGFP29279 HMGN2P19-201ENST00000425149 265 ntBASIC1.7□□□□□ -2.14
CTGFP29279 AC087499.7-201ENST00000441958 109 ntBASIC1.7□□□□□ -2.14
CTGFP29279 RNA5SP233-201ENST00000459153 113 ntBASIC1.7□□□□□ -2.14
CTGFP29279 RNA5SP220-201ENST00000516298 104 ntBASIC1.7□□□□□ -2.14
CTGFP29279 MIR514B-201ENST00000516774 80 ntBASIC1.7□□□□□ -2.14
CTGFP29279 MIR3935-201ENST00000583472 104 ntBASIC1.7□□□□□ -2.14
CTGFP29279 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.7□□□□□ -2.14
CTGFP29279 AL078603.1-201ENST00000603824 313 ntBASIC1.7□□□□□ -2.14
CTGFP29279 MIR8074-201ENST00000615081 81 ntBASIC1.7□□□□□ -2.14
CTGFP29279 MIR6734-201ENST00000621166 68 ntBASIC1.7□□□□□ -2.14
CTGFP29279 MIR664A-201ENST00000626086 82 ntBASIC1.7□□□□□ -2.14
CTGFP29279 SNORA1.2-201ENST00000365189 134 ntBASIC1.69□□□□□ -2.14
CTGFP29279 MIR513A1-201ENST00000385138 129 ntBASIC1.69□□□□□ -2.14
CTGFP29279 RNU6-1319P-201ENST00000390855 104 ntBASIC1.69□□□□□ -2.14
CTGFP29279 RNU6-747P-201ENST00000390928 104 ntBASIC1.69□□□□□ -2.14
CTGFP29279 RNU6-241P-201ENST00000391148 104 ntBASIC1.69□□□□□ -2.14
CTGFP29279 RNU6-177P-201ENST00000411257 104 ntBASIC1.69□□□□□ -2.14
CTGFP29279 RNU7-96P-201ENST00000459535 64 ntBASIC1.69□□□□□ -2.14
CTGFP29279 RN7SL274P-201ENST00000492268 272 ntBASIC1.69□□□□□ -2.14
CTGFP29279 AC093729.1-201ENST00000513074 128 ntBASIC1.69□□□□□ -2.14
CTGFP29279 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.69□□□□□ -2.14
CTGFP29279 AL627230.6-201ENST00000611129 280 ntBASIC1.69□□□□□ -2.14
CTGFP29279 AL359851.1-201ENST00000569460 4997 ntBASIC1.69□□□□□ -2.14
CTGFP29279 SNORD115-34-201ENST00000362441 82 ntBASIC1.68□□□□□ -2.14
CTGFP29279 SNORD115-12-201ENST00000362583 82 ntBASIC1.68□□□□□ -2.14
CTGFP29279 SNORD115-29-201ENST00000362834 82 ntBASIC1.68□□□□□ -2.14
CTGFP29279 SNORD115-9-201ENST00000362912 82 ntBASIC1.68□□□□□ -2.14
CTGFP29279 SNORD115-21-201ENST00000362963 81 ntBASIC1.68□□□□□ -2.14
CTGFP29279 SNORD115-14-201ENST00000363090 81 ntBASIC1.68□□□□□ -2.14
CTGFP29279 RNU4-32P-201ENST00000363404 141 ntBASIC1.68□□□□□ -2.14
CTGFP29279 SNORD115-41-201ENST00000363608 82 ntBASIC1.68□□□□□ -2.14
CTGFP29279 SNORD115-11-201ENST00000363616 82 ntBASIC1.68□□□□□ -2.14
CTGFP29279 SNORD115-5-201ENST00000363633 82 ntBASIC1.68□□□□□ -2.14
CTGFP29279 RNA5SP325-201ENST00000363756 130 ntBASIC1.68□□□□□ -2.14
CTGFP29279 SNORD115-4-201ENST00000363810 82 ntBASIC1.68□□□□□ -2.14
CTGFP29279 SNORD115-6-201ENST00000363942 82 ntBASIC1.68□□□□□ -2.14
CTGFP29279 SNORD115-42-201ENST00000364273 82 ntBASIC1.68□□□□□ -2.14
CTGFP29279 RNU1-93P-201ENST00000364704 169 ntBASIC1.68□□□□□ -2.14
CTGFP29279 SNORD115-15-201ENST00000364809 81 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms