Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 MIR548H2-201ENST00000408874 88 ntBASIC-0.21□□□□□ -2.44
MBD3O95983 RNA5SP144-201ENST00000410846 116 ntBASIC-0.21□□□□□ -2.44
MBD3O95983 RNU6-531P-201ENST00000516694 104 ntBASIC-0.21□□□□□ -2.44
MBD3O95983 DEFB131E-201ENST00000532329 154 ntBASIC-0.21□□□□□ -2.44
MBD3O95983 RNU6-161P-201ENST00000363051 106 ntBASIC-0.22□□□□□ -2.44
MBD3O95983 RNA5SP98-201ENST00000363158 137 ntBASIC-0.22□□□□□ -2.44
MBD3O95983 RNA5SP245-201ENST00000364239 121 ntBASIC-0.22□□□□□ -2.44
MBD3O95983 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.22□□□□□ -2.44
MBD3O95983 MIR1302-6-201ENST00000408466 90 ntBASIC-0.22□□□□□ -2.44
MBD3O95983 U7.6-201ENST00000610841 64 ntBASIC-0.22□□□□□ -2.44
MBD3O95983 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.22□□□□□ -2.44
MBD3O95983 MIR8062-201ENST00000621515 85 ntBASIC-0.22□□□□□ -2.44
MBD3O95983 AL162376.1-201ENST00000624117 175 ntBASIC-0.22□□□□□ -2.44
MBD3O95983 MIR101-2-201ENST00000362195 79 ntBASIC-0.23□□□□□ -2.45
MBD3O95983 RNA5SP133-201ENST00000363368 119 ntBASIC-0.23□□□□□ -2.45
MBD3O95983 AL022718.1-201ENST00000412004 84 ntBASIC-0.23□□□□□ -2.45
MBD3O95983 AC138869.1-201ENST00000568623 124 ntBASIC-0.23□□□□□ -2.45
MBD3O95983 MIR5589-201ENST00000579442 60 ntBASIC-0.23□□□□□ -2.45
MBD3O95983 AC098479.1-201ENST00000609225 154 ntBASIC-0.23□□□□□ -2.45
MBD3O95983 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.23□□□□□ -2.45
MBD3O95983 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.24□□□□□ -2.45
MBD3O95983 SNORA25.7-201ENST00000364375 127 ntBASIC-0.24□□□□□ -2.45
MBD3O95983 MIR593-201ENST00000384856 100 ntBASIC-0.24□□□□□ -2.45
MBD3O95983 MIR214-201ENST00000385214 110 ntBASIC-0.24□□□□□ -2.45
MBD3O95983 RNU7-113P-201ENST00000459273 62 ntBASIC-0.24□□□□□ -2.45
MBD3O95983 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.24□□□□□ -2.45
MBD3O95983 AL356055.1-201ENST00000602528 446 ntBASIC-0.24□□□□□ -2.45
MBD3O95983 SNORD114-10-201ENST00000363409 72 ntBASIC-0.25□□□□□ -2.45
MBD3O95983 RNU6-702P-201ENST00000364982 107 ntBASIC-0.25□□□□□ -2.45
MBD3O95983 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.25□□□□□ -2.45
MBD3O95983 RNU6-35P-201ENST00000384530 107 ntBASIC-0.25□□□□□ -2.45
MBD3O95983 RNA5SP395-201ENST00000516567 118 ntBASIC-0.25□□□□□ -2.45
MBD3O95983 RNU7-10P-201ENST00000607194 63 ntBASIC-0.25□□□□□ -2.45
MBD3O95983 MIR499B-201ENST00000636498 73 ntBASIC-0.25□□□□□ -2.45
MBD3O95983 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.26□□□□□ -2.45
MBD3O95983 SNORD115-24-201ENST00000363528 82 ntBASIC-0.26□□□□□ -2.45
MBD3O95983 RNU4-16P-201ENST00000364737 141 ntBASIC-0.26□□□□□ -2.45
MBD3O95983 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.26□□□□□ -2.45
MBD3O95983 RNU6-643P-201ENST00000384018 107 ntBASIC-0.26□□□□□ -2.45
MBD3O95983 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.26□□□□□ -2.45
MBD3O95983 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.26□□□□□ -2.45
MBD3O95983 RNU7-165P-201ENST00000458864 60 ntBASIC-0.26□□□□□ -2.45
MBD3O95983 AC138749.4-201ENST00000563970 127 ntBASIC-0.26□□□□□ -2.45
MBD3O95983 MIR548H5-201ENST00000580314 60 ntBASIC-0.26□□□□□ -2.45
MBD3O95983 MIR548AD-201ENST00000584780 82 ntBASIC-0.26□□□□□ -2.45
MBD3O95983 SNORA63.5-201ENST00000363548 123 ntBASIC-0.27□□□□□ -2.45
MBD3O95983 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.27□□□□□ -2.45
MBD3O95983 RNU6-867P-201ENST00000364956 107 ntBASIC-0.27□□□□□ -2.45
MBD3O95983 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.27□□□□□ -2.45
MBD3O95983 RNU6-429P-201ENST00000384582 108 ntBASIC-0.27□□□□□ -2.45
MBD3O95983 MT-TW-201ENST00000387382 68 ntBASIC-0.27□□□□□ -2.45
MBD3O95983 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.27□□□□□ -2.45
MBD3O95983 RNA5SP33-201ENST00000516687 98 ntBASIC-0.27□□□□□ -2.45
MBD3O95983 RNU7-137P-201ENST00000516788 62 ntBASIC-0.27□□□□□ -2.45
MBD3O95983 MIR4643-201ENST00000577473 78 ntBASIC-0.27□□□□□ -2.45
MBD3O95983 MIR4752-201ENST00000579672 72 ntBASIC-0.27□□□□□ -2.45
MBD3O95983 U6.109-201ENST00000636749 87 ntBASIC-0.27□□□□□ -2.45
MBD3O95983 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.28□□□□□ -2.45
MBD3O95983 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.28□□□□□ -2.45
MBD3O95983 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.28□□□□□ -2.45
MBD3O95983 RNY1P2-201ENST00000364820 117 ntBASIC-0.28□□□□□ -2.45
MBD3O95983 SNORD41.1-201ENST00000391000 69 ntBASIC-0.28□□□□□ -2.45
MBD3O95983 MIR1265-201ENST00000408444 86 ntBASIC-0.28□□□□□ -2.45
MBD3O95983 RNU7-159P-201ENST00000459284 62 ntBASIC-0.28□□□□□ -2.45
MBD3O95983 MTND1P19-201ENST00000511780 315 ntBASIC-0.28□□□□□ -2.45
MBD3O95983 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.28□□□□□ -2.45
MBD3O95983 MIR4636-201ENST00000582271 80 ntBASIC-0.28□□□□□ -2.45
MBD3O95983 AC044792.1-201ENST00000593294 196 ntBASIC-0.28□□□□□ -2.45
MBD3O95983 AC011603.4-201ENST00000611325 277 ntBASIC-0.28□□□□□ -2.45
MBD3O95983 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.28□□□□□ -2.45
MBD3O95983 AC073869.9-201ENST00000641610 120 ntBASIC-0.28□□□□□ -2.45
MBD3O95983 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.29□□□□□ -2.46
MBD3O95983 RNA5SP403-201ENST00000363598 108 ntBASIC-0.29□□□□□ -2.46
MBD3O95983 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.29□□□□□ -2.46
MBD3O95983 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.29□□□□□ -2.46
MBD3O95983 MIR1912-201ENST00000410389 80 ntBASIC-0.29□□□□□ -2.46
MBD3O95983 RNU6-635P-201ENST00000516651 102 ntBASIC-0.29□□□□□ -2.46
MBD3O95983 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.29□□□□□ -2.46
MBD3O95983 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.29□□□□□ -2.46
MBD3O95983 MIR4802-201ENST00000581881 80 ntBASIC-0.29□□□□□ -2.46
MBD3O95983 RNY4P28-201ENST00000365281 93 ntBASIC-0.3□□□□□ -2.46
MBD3O95983 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.3□□□□□ -2.46
MBD3O95983 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.3□□□□□ -2.46
MBD3O95983 RNU6-472P-201ENST00000384299 107 ntBASIC-0.3□□□□□ -2.46
MBD3O95983 MIR501-201ENST00000390204 84 ntBASIC-0.3□□□□□ -2.46
MBD3O95983 RNA5SP236-201ENST00000516169 116 ntBASIC-0.3□□□□□ -2.46
MBD3O95983 RNU7-161P-201ENST00000517289 62 ntBASIC-0.3□□□□□ -2.46
MBD3O95983 RNU6-756P-201ENST00000383997 107 ntBASIC-0.31□□□□□ -2.46
MBD3O95983 RNU6-929P-201ENST00000384429 107 ntBASIC-0.31□□□□□ -2.46
MBD3O95983 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.31□□□□□ -2.46
MBD3O95983 RNU6-180P-201ENST00000516697 61 ntBASIC-0.31□□□□□ -2.46
MBD3O95983 uc_338.28-201ENST00000612082 187 ntBASIC-0.31□□□□□ -2.46
MBD3O95983 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.32□□□□□ -2.46
MBD3O95983 RNU6-449P-201ENST00000383914 107 ntBASIC-0.32□□□□□ -2.46
MBD3O95983 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.32□□□□□ -2.46
MBD3O95983 MIR548L-201ENST00000408303 86 ntBASIC-0.32□□□□□ -2.46
MBD3O95983 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.32□□□□□ -2.46
MBD3O95983 SNORD67.1-201ENST00000516618 108 ntBASIC-0.32□□□□□ -2.46
MBD3O95983 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.32□□□□□ -2.46
MBD3O95983 MIR4645-201ENST00000583158 77 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms