Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 U6.90-201ENST00000614007 104 ntBASIC0.65□□□□□ -2.31
GPC4O75487 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.65□□□□□ -2.31
GPC4O75487 U6.70-201ENST00000620287 104 ntBASIC0.65□□□□□ -2.31
GPC4O75487 MIR18A-201ENST00000362310 71 ntBASIC0.64□□□□□ -2.31
GPC4O75487 RNY1P13-201ENST00000365030 105 ntBASIC0.64□□□□□ -2.31
GPC4O75487 MTATP6P21-201ENST00000440681 189 ntBASIC0.64□□□□□ -2.31
GPC4O75487 RNU7-123P-201ENST00000515911 60 ntBASIC0.64□□□□□ -2.31
GPC4O75487 RNU6-794P-201ENST00000517261 64 ntBASIC0.64□□□□□ -2.31
GPC4O75487 MIR548AE2-201ENST00000583456 67 ntBASIC0.64□□□□□ -2.31
GPC4O75487 AL590095.2-201ENST00000604136 117 ntBASIC0.64□□□□□ -2.31
GPC4O75487 AC105081.1-201ENST00000617727 106 ntBASIC0.64□□□□□ -2.31
GPC4O75487 MIR508-201ENST00000384857 115 ntBASIC0.63□□□□□ -2.31
GPC4O75487 RNU6-679P-201ENST00000391003 106 ntBASIC0.63□□□□□ -2.31
GPC4O75487 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.63□□□□□ -2.31
GPC4O75487 RNU6-893P-201ENST00000458841 100 ntBASIC0.63□□□□□ -2.31
GPC4O75487 RNU6-346P-201ENST00000516288 111 ntBASIC0.63□□□□□ -2.31
GPC4O75487 AC004812.1-201ENST00000540773 146 ntBASIC0.63□□□□□ -2.31
GPC4O75487 MIR8066-201ENST00000617280 78 ntBASIC0.63□□□□□ -2.31
GPC4O75487 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
GPC4O75487 Y_RNA.13-201ENST00000362403 112 ntBASIC0.62□□□□□ -2.31
GPC4O75487 RNU6-949P-201ENST00000384040 107 ntBASIC0.62□□□□□ -2.31
GPC4O75487 Y_RNA.588-201ENST00000391254 102 ntBASIC0.62□□□□□ -2.31
GPC4O75487 AL603914.1-201ENST00000401964 204 ntBASIC0.62□□□□□ -2.31
GPC4O75487 RNU7-79P-201ENST00000516082 62 ntBASIC0.62□□□□□ -2.31
GPC4O75487 SNORA25.16-201ENST00000516741 121 ntBASIC0.62□□□□□ -2.31
GPC4O75487 MIR4714-201ENST00000580728 77 ntBASIC0.62□□□□□ -2.31
GPC4O75487 MIR4491-201ENST00000581087 68 ntBASIC0.62□□□□□ -2.31
GPC4O75487 Y_RNA.42-201ENST00000362660 108 ntBASIC0.61□□□□□ -2.31
GPC4O75487 Y_RNA.120-201ENST00000363304 110 ntBASIC0.61□□□□□ -2.31
GPC4O75487 Y_RNA.420-201ENST00000384043 110 ntBASIC0.61□□□□□ -2.31
GPC4O75487 SNORD100-201ENST00000408573 76 ntBASIC0.61□□□□□ -2.31
GPC4O75487 RNU7-197P-201ENST00000458836 62 ntBASIC0.61□□□□□ -2.31
GPC4O75487 AC002350.1-201ENST00000490759 375 ntBASIC0.61□□□□□ -2.31
GPC4O75487 DEFB131E-201ENST00000532329 154 ntBASIC0.61□□□□□ -2.31
GPC4O75487 MIR3668-201ENST00000582138 75 ntBASIC0.61□□□□□ -2.31
GPC4O75487 SNORD115-2-201ENST00000362842 82 ntBASIC0.6□□□□□ -2.31
GPC4O75487 Y_RNA.118-201ENST00000363300 101 ntBASIC0.6□□□□□ -2.31
GPC4O75487 Y_RNA.215-201ENST00000364204 112 ntBASIC0.6□□□□□ -2.31
GPC4O75487 SNORD115-20-201ENST00000365099 82 ntBASIC0.6□□□□□ -2.31
GPC4O75487 Y_RNA.531-201ENST00000384589 121 ntBASIC0.6□□□□□ -2.31
GPC4O75487 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
GPC4O75487 Y_RNA.580-201ENST00000391004 95 ntBASIC0.6□□□□□ -2.31
GPC4O75487 RNU6-426P-201ENST00000516464 97 ntBASIC0.6□□□□□ -2.31
GPC4O75487 RNY4P20-201ENST00000516678 93 ntBASIC0.6□□□□□ -2.31
GPC4O75487 RNU7-35P-201ENST00000517174 62 ntBASIC0.6□□□□□ -2.31
GPC4O75487 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.6□□□□□ -2.31
GPC4O75487 AC011603.4-201ENST00000611325 277 ntBASIC0.6□□□□□ -2.31
GPC4O75487 Y_RNA.170-201ENST00000363746 110 ntBASIC0.59□□□□□ -2.31
GPC4O75487 RNU6-945P-201ENST00000383947 107 ntBASIC0.59□□□□□ -2.31
GPC4O75487 RNU6-1104P-201ENST00000384723 104 ntBASIC0.59□□□□□ -2.31
GPC4O75487 MIR140-201ENST00000385282 100 ntBASIC0.59□□□□□ -2.31
GPC4O75487 MT-TR-201ENST00000387439 65 ntBASIC0.59□□□□□ -2.31
GPC4O75487 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.31
GPC4O75487 SNORD67.1-201ENST00000516618 108 ntBASIC0.59□□□□□ -2.31
GPC4O75487 MIR548X2-201ENST00000579776 100 ntBASIC0.59□□□□□ -2.31
GPC4O75487 AC098479.1-201ENST00000609225 154 ntBASIC0.59□□□□□ -2.31
GPC4O75487 AL137067.1-201ENST00000615933 120 ntBASIC0.59□□□□□ -2.31
GPC4O75487 U6.109-201ENST00000636749 87 ntBASIC0.59□□□□□ -2.31
GPC4O75487 Y_RNA.298-201ENST00000364960 107 ntBASIC0.58□□□□□ -2.32
GPC4O75487 RNU6-448P-201ENST00000517052 107 ntBASIC0.58□□□□□ -2.32
GPC4O75487 IGKV1-22-201ENST00000524313 326 ntBASIC0.58□□□□□ -2.32
GPC4O75487 AP001328.1-201ENST00000528550 176 ntBASIC0.58□□□□□ -2.32
GPC4O75487 MTND5P34-201ENST00000568888 325 ntBASIC0.58□□□□□ -2.32
GPC4O75487 AL359881.1-201ENST00000602916 267 ntBASIC0.58□□□□□ -2.32
GPC4O75487 MIR6515-201ENST00000619843 57 ntBASIC0.58□□□□□ -2.32
GPC4O75487 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
GPC4O75487 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
GPC4O75487 RNU6-235P-201ENST00000362644 107 ntBASIC0.57□□□□□ -2.32
GPC4O75487 RNA5SP133-201ENST00000363368 119 ntBASIC0.57□□□□□ -2.32
GPC4O75487 Y_RNA.400-201ENST00000383963 111 ntBASIC0.57□□□□□ -2.32
GPC4O75487 MIR489-201ENST00000384923 84 ntBASIC0.57□□□□□ -2.32
GPC4O75487 MIR569-201ENST00000385228 96 ntBASIC0.57□□□□□ -2.32
GPC4O75487 MIR644A-201ENST00000385262 94 ntBASIC0.57□□□□□ -2.32
GPC4O75487 RNU6-907P-201ENST00000390924 102 ntBASIC0.57□□□□□ -2.32
GPC4O75487 MIR1263-201ENST00000408324 86 ntBASIC0.57□□□□□ -2.32
GPC4O75487 MIR1270-201ENST00000459320 83 ntBASIC0.57□□□□□ -2.32
GPC4O75487 RNU6-531P-201ENST00000516694 104 ntBASIC0.57□□□□□ -2.32
GPC4O75487 RNU6-255P-201ENST00000516957 105 ntBASIC0.57□□□□□ -2.32
GPC4O75487 MIR6082-201ENST00000613604 109 ntBASIC0.57□□□□□ -2.32
GPC4O75487 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.57□□□□□ -2.32
GPC4O75487 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
GPC4O75487 RNU6-774P-201ENST00000363238 107 ntBASIC0.56□□□□□ -2.32
GPC4O75487 Y_RNA.114-201ENST00000363265 113 ntBASIC0.56□□□□□ -2.32
GPC4O75487 Y_RNA.488-201ENST00000384403 102 ntBASIC0.56□□□□□ -2.32
GPC4O75487 Y_RNA.692-201ENST00000516627 105 ntBASIC0.56□□□□□ -2.32
GPC4O75487 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.55□□□□□ -2.32
GPC4O75487 RNA5SP117-201ENST00000365294 118 ntBASIC0.55□□□□□ -2.32
GPC4O75487 AC018659.1-201ENST00000551083 169 ntBASIC0.55□□□□□ -2.32
GPC4O75487 RNA5SP499-201ENST00000363982 119 ntBASIC0.54□□□□□ -2.32
GPC4O75487 RNU6-209P-201ENST00000384118 107 ntBASIC0.54□□□□□ -2.32
GPC4O75487 Y_RNA.555-201ENST00000384673 110 ntBASIC0.54□□□□□ -2.32
GPC4O75487 RNU6-1194P-201ENST00000516208 104 ntBASIC0.54□□□□□ -2.32
GPC4O75487 Y_RNA.697-201ENST00000516776 113 ntBASIC0.54□□□□□ -2.32
GPC4O75487 RNU7-137P-201ENST00000516788 62 ntBASIC0.54□□□□□ -2.32
GPC4O75487 MIR3678-201ENST00000578455 94 ntBASIC0.54□□□□□ -2.32
GPC4O75487 MIR3121-201ENST00000579680 77 ntBASIC0.54□□□□□ -2.32
GPC4O75487 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.54□□□□□ -2.32
GPC4O75487 MIR6513-201ENST00000621188 64 ntBASIC0.54□□□□□ -2.32
GPC4O75487 RNU4-45P-201ENST00000365469 141 ntBASIC0.53□□□□□ -2.32
GPC4O75487 MT-TI-201ENST00000387365 69 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms