Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 MIR4711-201ENST00000578274 70 ntBASIC0.7□□□□□ -2.3
ATP2A1O14983 MIR3144-201ENST00000579460 79 ntBASIC0.7□□□□□ -2.3
ATP2A1O14983 AC021443.1-201ENST00000604478 211 ntBASIC0.7□□□□□ -2.3
ATP2A1O14983 MIR6779-201ENST00000617283 64 ntBASIC0.7□□□□□ -2.3
ATP2A1O14983 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
ATP2A1O14983 RNU6-804P-201ENST00000384286 107 ntBASIC0.69□□□□□ -2.3
ATP2A1O14983 COX6CP6-201ENST00000490840 228 ntBASIC0.69□□□□□ -2.3
ATP2A1O14983 Y_RNA.686-201ENST00000516548 134 ntBASIC0.69□□□□□ -2.3
ATP2A1O14983 RNA5SP499-201ENST00000363982 119 ntBASIC0.68□□□□□ -2.3
ATP2A1O14983 RNU6-309P-201ENST00000364573 106 ntBASIC0.68□□□□□ -2.3
ATP2A1O14983 Y_RNA.470-201ENST00000384307 117 ntBASIC0.68□□□□□ -2.3
ATP2A1O14983 U8.15-201ENST00000390947 134 ntBASIC0.68□□□□□ -2.3
ATP2A1O14983 MIR513C-201ENST00000401352 84 ntBASIC0.68□□□□□ -2.3
ATP2A1O14983 RNA5SP222-201ENST00000411039 105 ntBASIC0.68□□□□□ -2.3
ATP2A1O14983 RNA5SP33-201ENST00000516687 98 ntBASIC0.68□□□□□ -2.3
ATP2A1O14983 RNU7-35P-201ENST00000517174 62 ntBASIC0.68□□□□□ -2.3
ATP2A1O14983 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.68□□□□□ -2.3
ATP2A1O14983 RNY1P13-201ENST00000365030 105 ntBASIC0.67□□□□□ -2.3
ATP2A1O14983 RNU4-45P-201ENST00000365469 141 ntBASIC0.67□□□□□ -2.3
ATP2A1O14983 Y_RNA.531-201ENST00000384589 121 ntBASIC0.67□□□□□ -2.3
ATP2A1O14983 RNU4-83P-201ENST00000410863 133 ntBASIC0.67□□□□□ -2.3
ATP2A1O14983 AL512326.2-201ENST00000426359 151 ntBASIC0.67□□□□□ -2.3
ATP2A1O14983 RNU2-35P-201ENST00000516446 142 ntBASIC0.67□□□□□ -2.3
ATP2A1O14983 AC090897.1-201ENST00000580909 226 ntBASIC0.67□□□□□ -2.3
ATP2A1O14983 AC008608.1-201ENST00000603910 127 ntBASIC0.67□□□□□ -2.3
ATP2A1O14983 Y_RNA.8-201ENST00000362353 102 ntBASIC0.66□□□□□ -2.3
ATP2A1O14983 Y_RNA.398-201ENST00000383952 99 ntBASIC0.66□□□□□ -2.3
ATP2A1O14983 Y_RNA.400-201ENST00000383963 111 ntBASIC0.66□□□□□ -2.3
ATP2A1O14983 AC096949.1-201ENST00000412047 152 ntBASIC0.66□□□□□ -2.3
ATP2A1O14983 RNU7-164P-201ENST00000459221 62 ntBASIC0.66□□□□□ -2.3
ATP2A1O14983 RNU7-79P-201ENST00000516082 62 ntBASIC0.66□□□□□ -2.3
ATP2A1O14983 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.66□□□□□ -2.3
ATP2A1O14983 MIR3612-201ENST00000579753 87 ntBASIC0.66□□□□□ -2.3
ATP2A1O14983 MIR548X2-201ENST00000579776 100 ntBASIC0.66□□□□□ -2.3
ATP2A1O14983 AL589743.1-201ENST00000551932 2712 ntBASIC0.66□□□□□ -2.3
ATP2A1O14983 Y_RNA.42-201ENST00000362660 108 ntBASIC0.65□□□□□ -2.31
ATP2A1O14983 RNU6-508P-201ENST00000363231 103 ntBASIC0.65□□□□□ -2.31
ATP2A1O14983 Y_RNA.180-201ENST00000363867 113 ntBASIC0.65□□□□□ -2.31
ATP2A1O14983 RNU6-460P-201ENST00000391158 108 ntBASIC0.65□□□□□ -2.31
ATP2A1O14983 SNORD100-201ENST00000408573 76 ntBASIC0.65□□□□□ -2.31
ATP2A1O14983 MIR8066-201ENST00000617280 78 ntBASIC0.65□□□□□ -2.31
ATP2A1O14983 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.65□□□□□ -2.31
ATP2A1O14983 Y_RNA.366-201ENST00000365540 102 ntBASIC0.64□□□□□ -2.31
ATP2A1O14983 Y_RNA.464-201ENST00000384282 110 ntBASIC0.64□□□□□ -2.31
ATP2A1O14983 MIR92A1-201ENST00000385233 78 ntBASIC0.64□□□□□ -2.31
ATP2A1O14983 Y_RNA.588-201ENST00000391254 102 ntBASIC0.64□□□□□ -2.31
ATP2A1O14983 RNU7-123P-201ENST00000515911 60 ntBASIC0.64□□□□□ -2.31
ATP2A1O14983 SNORA25.12-201ENST00000516202 82 ntBASIC0.64□□□□□ -2.31
ATP2A1O14983 RNU6-765P-201ENST00000516916 99 ntBASIC0.64□□□□□ -2.31
ATP2A1O14983 RNU6-448P-201ENST00000517052 107 ntBASIC0.64□□□□□ -2.31
ATP2A1O14983 AP003327.1-201ENST00000529684 127 ntBASIC0.64□□□□□ -2.31
ATP2A1O14983 MIR4491-201ENST00000581087 68 ntBASIC0.64□□□□□ -2.31
ATP2A1O14983 RNU6-915P-201ENST00000364943 103 ntBASIC0.63□□□□□ -2.31
ATP2A1O14983 Y_RNA.298-201ENST00000364960 107 ntBASIC0.63□□□□□ -2.31
ATP2A1O14983 Y_RNA.299-201ENST00000364973 94 ntBASIC0.63□□□□□ -2.31
ATP2A1O14983 SNORA36.2-201ENST00000384004 127 ntBASIC0.63□□□□□ -2.31
ATP2A1O14983 RNY1P4-201ENST00000384595 115 ntBASIC0.63□□□□□ -2.31
ATP2A1O14983 AC002350.1-201ENST00000490759 375 ntBASIC0.63□□□□□ -2.31
ATP2A1O14983 Y_RNA.692-201ENST00000516627 105 ntBASIC0.63□□□□□ -2.31
ATP2A1O14983 MIR548AE2-201ENST00000583456 67 ntBASIC0.63□□□□□ -2.31
ATP2A1O14983 MIR6082-201ENST00000613604 109 ntBASIC0.63□□□□□ -2.31
ATP2A1O14983 AL137067.1-201ENST00000615933 120 ntBASIC0.63□□□□□ -2.31
ATP2A1O14983 AP001340.1-201ENST00000624405 217 ntBASIC0.63□□□□□ -2.31
ATP2A1O14983 MIR18A-201ENST00000362310 71 ntBASIC0.62□□□□□ -2.31
ATP2A1O14983 RNU6-403P-201ENST00000363163 104 ntBASIC0.62□□□□□ -2.31
ATP2A1O14983 Y_RNA.215-201ENST00000364204 112 ntBASIC0.62□□□□□ -2.31
ATP2A1O14983 SNORA32-201ENST00000384072 121 ntBASIC0.62□□□□□ -2.31
ATP2A1O14983 RNU5E-3P-201ENST00000515913 68 ntBASIC0.62□□□□□ -2.31
ATP2A1O14983 MTND5P41-201ENST00000517498 206 ntBASIC0.62□□□□□ -2.31
ATP2A1O14983 MIR3668-201ENST00000582138 75 ntBASIC0.62□□□□□ -2.31
ATP2A1O14983 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.62□□□□□ -2.31
ATP2A1O14983 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
ATP2A1O14983 Y_RNA.13-201ENST00000362403 112 ntBASIC0.61□□□□□ -2.31
ATP2A1O14983 MIR140-201ENST00000385282 100 ntBASIC0.61□□□□□ -2.31
ATP2A1O14983 AC098934.3-201ENST00000430450 190 ntBASIC0.61□□□□□ -2.31
ATP2A1O14983 RNU6-1212P-201ENST00000517023 104 ntBASIC0.61□□□□□ -2.31
ATP2A1O14983 AP001328.1-201ENST00000528550 176 ntBASIC0.61□□□□□ -2.31
ATP2A1O14983 MIR3121-201ENST00000579680 77 ntBASIC0.61□□□□□ -2.31
ATP2A1O14983 AC108081.1-201ENST00000604358 221 ntBASIC0.61□□□□□ -2.31
ATP2A1O14983 AC021753.1-201ENST00000635724 168 ntBASIC0.61□□□□□ -2.31
ATP2A1O14983 SNORD114-23-201ENST00000363536 72 ntBASIC0.6□□□□□ -2.31
ATP2A1O14983 RNA5SP117-201ENST00000365294 118 ntBASIC0.6□□□□□ -2.31
ATP2A1O14983 Y_RNA.420-201ENST00000384043 110 ntBASIC0.6□□□□□ -2.31
ATP2A1O14983 MIR569-201ENST00000385228 96 ntBASIC0.6□□□□□ -2.31
ATP2A1O14983 RNU4-69P-201ENST00000410677 143 ntBASIC0.6□□□□□ -2.31
ATP2A1O14983 RNY4P20-201ENST00000516678 93 ntBASIC0.6□□□□□ -2.31
ATP2A1O14983 AC243829.3-201ENST00000622177 108 ntBASIC0.6□□□□□ -2.31
ATP2A1O14983 AC010487.4-201ENST00000637027 61 ntBASIC0.6□□□□□ -2.31
ATP2A1O14983 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
ATP2A1O14983 Y_RNA.205-201ENST00000364128 113 ntBASIC0.59□□□□□ -2.31
ATP2A1O14983 SNORA72.6-201ENST00000384520 129 ntBASIC0.59□□□□□ -2.31
ATP2A1O14983 RNU6-733P-201ENST00000410759 104 ntBASIC0.59□□□□□ -2.31
ATP2A1O14983 RNU7-137P-201ENST00000516788 62 ntBASIC0.59□□□□□ -2.31
ATP2A1O14983 SNORD114-10-201ENST00000363409 72 ntBASIC0.58□□□□□ -2.32
ATP2A1O14983 Y_RNA.170-201ENST00000363746 110 ntBASIC0.58□□□□□ -2.32
ATP2A1O14983 RNY1P8-201ENST00000383970 114 ntBASIC0.58□□□□□ -2.32
ATP2A1O14983 SNORD67.1-201ENST00000516618 108 ntBASIC0.58□□□□□ -2.32
ATP2A1O14983 AC018659.1-201ENST00000551083 169 ntBASIC0.58□□□□□ -2.32
ATP2A1O14983 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
ATP2A1O14983 Y_RNA.488-201ENST00000384403 102 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms