Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.18□□□□□ -2.44
TRAV39A0A0B4J263 RNU6-929P-201ENST00000384429 107 ntBASIC-0.18□□□□□ -2.44
TRAV39A0A0B4J263 AL022718.1-201ENST00000412004 84 ntBASIC-0.18□□□□□ -2.44
TRAV39A0A0B4J263 AC138869.1-201ENST00000568623 124 ntBASIC-0.18□□□□□ -2.44
TRAV39A0A0B4J263 RNU1-29P-201ENST00000606574 126 ntBASIC-0.18□□□□□ -2.44
TRAV39A0A0B4J263 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.19□□□□□ -2.44
TRAV39A0A0B4J263 RNU6-702P-201ENST00000364982 107 ntBASIC-0.19□□□□□ -2.44
TRAV39A0A0B4J263 RNU6V-201ENST00000384105 107 ntBASIC-0.19□□□□□ -2.44
TRAV39A0A0B4J263 AC108059.2-201ENST00000434626 151 ntBASIC-0.19□□□□□ -2.44
TRAV39A0A0B4J263 AC138749.4-201ENST00000563970 127 ntBASIC-0.19□□□□□ -2.44
TRAV39A0A0B4J263 AC105081.1-201ENST00000617727 106 ntBASIC-0.19□□□□□ -2.44
TRAV39A0A0B4J263 MIR8062-201ENST00000621515 85 ntBASIC-0.19□□□□□ -2.44
TRAV39A0A0B4J263 RNU6-726P-201ENST00000364680 107 ntBASIC-0.2□□□□□ -2.44
TRAV39A0A0B4J263 MIR329-2-201ENST00000385029 84 ntBASIC-0.2□□□□□ -2.44
TRAV39A0A0B4J263 RNU7-104P-201ENST00000459398 79 ntBASIC-0.2□□□□□ -2.44
TRAV39A0A0B4J263 SNORD67.1-201ENST00000516618 108 ntBASIC-0.2□□□□□ -2.44
TRAV39A0A0B4J263 RNU6-782P-201ENST00000516852 104 ntBASIC-0.2□□□□□ -2.44
TRAV39A0A0B4J263 AC141557.1-201ENST00000540982 400 ntBASIC-0.2□□□□□ -2.44
TRAV39A0A0B4J263 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.2□□□□□ -2.44
TRAV39A0A0B4J263 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.2□□□□□ -2.44
TRAV39A0A0B4J263 SNORA70.25-201ENST00000612741 95 ntBASIC-0.2□□□□□ -2.44
TRAV39A0A0B4J263 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.21□□□□□ -2.44
TRAV39A0A0B4J263 SNORA25.7-201ENST00000364375 127 ntBASIC-0.21□□□□□ -2.44
TRAV39A0A0B4J263 RNU6-923P-201ENST00000364753 107 ntBASIC-0.21□□□□□ -2.44
TRAV39A0A0B4J263 RNU6-652P-201ENST00000365488 107 ntBASIC-0.21□□□□□ -2.44
TRAV39A0A0B4J263 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.21□□□□□ -2.44
TRAV39A0A0B4J263 RNU6-643P-201ENST00000384018 107 ntBASIC-0.21□□□□□ -2.44
TRAV39A0A0B4J263 MIR548H2-201ENST00000408874 88 ntBASIC-0.21□□□□□ -2.44
TRAV39A0A0B4J263 RNU7-159P-201ENST00000459284 62 ntBASIC-0.21□□□□□ -2.44
TRAV39A0A0B4J263 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.21□□□□□ -2.44
TRAV39A0A0B4J263 RNU7-137P-201ENST00000516788 62 ntBASIC-0.21□□□□□ -2.44
TRAV39A0A0B4J263 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.21□□□□□ -2.44
TRAV39A0A0B4J263 AP001094.1-201ENST00000579805 193 ntBASIC-0.21□□□□□ -2.44
TRAV39A0A0B4J263 MIR548AE2-201ENST00000583456 67 ntBASIC-0.21□□□□□ -2.44
TRAV39A0A0B4J263 AC044792.1-201ENST00000593294 196 ntBASIC-0.21□□□□□ -2.44
TRAV39A0A0B4J263 AC011921.3-201ENST00000605540 361 ntBASIC-0.21□□□□□ -2.44
TRAV39A0A0B4J263 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.21□□□□□ -2.44
TRAV39A0A0B4J263 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.22□□□□□ -2.44
TRAV39A0A0B4J263 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.22□□□□□ -2.44
TRAV39A0A0B4J263 SNORA32.1-201ENST00000364514 115 ntBASIC-0.22□□□□□ -2.44
TRAV39A0A0B4J263 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.22□□□□□ -2.44
TRAV39A0A0B4J263 MIR501-201ENST00000390204 84 ntBASIC-0.22□□□□□ -2.44
TRAV39A0A0B4J263 MIR892B-201ENST00000401279 77 ntBASIC-0.22□□□□□ -2.44
TRAV39A0A0B4J263 RNU7-161P-201ENST00000517289 62 ntBASIC-0.22□□□□□ -2.44
TRAV39A0A0B4J263 AL359881.1-201ENST00000602916 267 ntBASIC-0.22□□□□□ -2.44
TRAV39A0A0B4J263 RNY1P2-201ENST00000364820 117 ntBASIC-0.23□□□□□ -2.45
TRAV39A0A0B4J263 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.23□□□□□ -2.45
TRAV39A0A0B4J263 RNA5SP163-201ENST00000410304 99 ntBASIC-0.23□□□□□ -2.45
TRAV39A0A0B4J263 MTCYBP6-201ENST00000441810 138 ntBASIC-0.23□□□□□ -2.45
TRAV39A0A0B4J263 MIR2909-201ENST00000617113 69 ntBASIC-0.23□□□□□ -2.45
TRAV39A0A0B4J263 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.24□□□□□ -2.45
TRAV39A0A0B4J263 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.24□□□□□ -2.45
TRAV39A0A0B4J263 RNU6-690P-201ENST00000365242 106 ntBASIC-0.24□□□□□ -2.45
TRAV39A0A0B4J263 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.24□□□□□ -2.45
TRAV39A0A0B4J263 RNU6-756P-201ENST00000383997 107 ntBASIC-0.24□□□□□ -2.45
TRAV39A0A0B4J263 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.24□□□□□ -2.45
TRAV39A0A0B4J263 AC244505.6-201ENST00000452829 130 ntBASIC-0.24□□□□□ -2.45
TRAV39A0A0B4J263 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.24□□□□□ -2.45
TRAV39A0A0B4J263 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.24□□□□□ -2.45
TRAV39A0A0B4J263 MIR548H5-201ENST00000580314 60 ntBASIC-0.24□□□□□ -2.45
TRAV39A0A0B4J263 AL162376.1-201ENST00000624117 175 ntBASIC-0.24□□□□□ -2.45
TRAV39A0A0B4J263 SNORD115-2-201ENST00000362842 82 ntBASIC-0.25□□□□□ -2.45
TRAV39A0A0B4J263 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.25□□□□□ -2.45
TRAV39A0A0B4J263 SNORD115-20-201ENST00000365099 82 ntBASIC-0.25□□□□□ -2.45
TRAV39A0A0B4J263 RNU6-472P-201ENST00000384299 107 ntBASIC-0.25□□□□□ -2.45
TRAV39A0A0B4J263 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.25□□□□□ -2.45
TRAV39A0A0B4J263 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.25□□□□□ -2.45
TRAV39A0A0B4J263 RNA5SP285-201ENST00000516619 119 ntBASIC-0.25□□□□□ -2.45
TRAV39A0A0B4J263 MIR5706-201ENST00000579841 80 ntBASIC-0.25□□□□□ -2.45
TRAV39A0A0B4J263 MIR4743-201ENST00000584576 69 ntBASIC-0.25□□□□□ -2.45
TRAV39A0A0B4J263 AC098479.1-201ENST00000609225 154 ntBASIC-0.25□□□□□ -2.45
TRAV39A0A0B4J263 AC067863.3-201ENST00000624172 122 ntBASIC-0.25□□□□□ -2.45
TRAV39A0A0B4J263 SNORD114-10-201ENST00000363409 72 ntBASIC-0.26□□□□□ -2.45
TRAV39A0A0B4J263 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.26□□□□□ -2.45
TRAV39A0A0B4J263 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.26□□□□□ -2.45
TRAV39A0A0B4J263 RNU2-38P-201ENST00000410856 79 ntBASIC-0.26□□□□□ -2.45
TRAV39A0A0B4J263 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.26□□□□□ -2.45
TRAV39A0A0B4J263 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.26□□□□□ -2.45
TRAV39A0A0B4J263 IGLVI-20-201ENST00000519296 130 ntBASIC-0.26□□□□□ -2.45
TRAV39A0A0B4J263 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.26□□□□□ -2.45
TRAV39A0A0B4J263 RNU6-797P-201ENST00000363101 109 ntBASIC-0.27□□□□□ -2.45
TRAV39A0A0B4J263 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.27□□□□□ -2.45
TRAV39A0A0B4J263 RNU6-269P-201ENST00000391077 97 ntBASIC-0.27□□□□□ -2.45
TRAV39A0A0B4J263 RNU2-35P-201ENST00000516446 142 ntBASIC-0.27□□□□□ -2.45
TRAV39A0A0B4J263 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
TRAV39A0A0B4J263 MIR4308-201ENST00000580634 81 ntBASIC-0.27□□□□□ -2.45
TRAV39A0A0B4J263 MIR548AD-201ENST00000584780 82 ntBASIC-0.27□□□□□ -2.45
TRAV39A0A0B4J263 U7.6-201ENST00000610841 64 ntBASIC-0.27□□□□□ -2.45
TRAV39A0A0B4J263 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.27□□□□□ -2.45
TRAV39A0A0B4J263 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.28□□□□□ -2.45
TRAV39A0A0B4J263 SNORD27-201ENST00000363981 72 ntBASIC-0.28□□□□□ -2.45
TRAV39A0A0B4J263 RNY4P28-201ENST00000365281 93 ntBASIC-0.28□□□□□ -2.45
TRAV39A0A0B4J263 RNU6-429P-201ENST00000384582 108 ntBASIC-0.28□□□□□ -2.45
TRAV39A0A0B4J263 RNU7-165P-201ENST00000458864 60 ntBASIC-0.28□□□□□ -2.45
TRAV39A0A0B4J263 MTND1P19-201ENST00000511780 315 ntBASIC-0.28□□□□□ -2.45
TRAV39A0A0B4J263 MIR4500-201ENST00000579472 76 ntBASIC-0.28□□□□□ -2.45
TRAV39A0A0B4J263 AL360085.1-201ENST00000604713 532 ntBASIC-0.28□□□□□ -2.45
TRAV39A0A0B4J263 RNA5SP403-201ENST00000363598 108 ntBASIC-0.29□□□□□ -2.46
TRAV39A0A0B4J263 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.29□□□□□ -2.46
TRAV39A0A0B4J263 MIR635-201ENST00000384830 98 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms