Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 MIR3678-201ENST00000578455 94 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 MIR4719-201ENST00000585233 84 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 AC092634.7-201ENST00000621022 103 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 U6.106-201ENST00000636360 105 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 MTND5P32-201ENST00000560711 1802 ntBASIC0.13□□□□□ -2.39
CHTOPQ9Y3Y2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.13-201ENST00000362403 112 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.193-201ENST00000363979 102 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 RNA5SP517-201ENST00000364724 117 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 SNORA20.1-201ENST00000364790 130 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-702P-201ENST00000364982 107 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.412-201ENST00000384001 104 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-949P-201ENST00000384040 107 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.447-201ENST00000384184 113 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 RNY1P6-201ENST00000384193 109 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.515-201ENST00000384535 112 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-679P-201ENST00000391003 106 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-1086P-201ENST00000410930 100 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 SNORA40.8-201ENST00000411034 126 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 MTND3P2-201ENST00000438452 342 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-765P-201ENST00000516916 99 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.757-201ENST00000578934 114 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 MIR4431-201ENST00000579990 94 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 MIR4491-201ENST00000581087 68 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 MIR4503-201ENST00000582187 83 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 MIR6082-201ENST00000613604 109 ntBASIC0.12□□□□□ -2.39
CHTOPQ9Y3Y2 MIR411-201ENST00000362239 96 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.52-201ENST00000362760 96 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.60-201ENST00000362831 98 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 SNORD115-2-201ENST00000362842 82 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-403P-201ENST00000363163 104 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 SNORD44.1-201ENST00000363202 61 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 SNORD118-201ENST00000363593 134 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.200-201ENST00000364018 102 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-312P-201ENST00000364629 107 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 RNU4-16P-201ENST00000364737 141 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.307-201ENST00000365022 117 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 RNY1P13-201ENST00000365030 105 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 SNORD115-20-201ENST00000365099 82 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.393-201ENST00000383936 102 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.452-201ENST00000384202 108 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-196P-201ENST00000384315 107 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 SNORA8.2-201ENST00000384372 139 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 SNORA18-201ENST00000384416 132 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.521-201ENST00000384560 114 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 RNY1P4-201ENST00000384595 115 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 MIR518A1-201ENST00000385068 85 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 RNA5SP144-201ENST00000410846 116 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 RPL39P25-201ENST00000449384 154 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 RNA5SP236-201ENST00000516169 116 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 SNORA25.12-201ENST00000516202 82 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 MIR3149-201ENST00000584629 83 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 uc_338.16-201ENST00000621804 95 ntBASIC0.11□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.32-201ENST00000362589 110 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.83-201ENST00000363005 113 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 SNORA36.1-201ENST00000363424 132 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 SNORD114-23-201ENST00000363536 72 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.171-201ENST00000363760 102 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.174-201ENST00000363781 105 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-47P-201ENST00000383866 107 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-1336P-201ENST00000383886 109 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 RNU6-768P-201ENST00000384683 107 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.567-201ENST00000384736 106 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 MIR644A-201ENST00000385262 94 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 Y_RNA.617-201ENST00000410920 90 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 SNORD71-201ENST00000411292 86 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 RNU7-79P-201ENST00000516082 62 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 RNU7-35P-201ENST00000517174 62 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 AC022523.2-201ENST00000561045 150 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 AC133485.4-201ENST00000561835 220 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 MIR4514-201ENST00000581410 57 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 AC009779.6-201ENST00000603972 165 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 AC078938.1-201ENST00000620993 318 ntBASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.1□□□□□ -2.39
CHTOPQ9Y3Y2 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.09□□□□□ -2.39
CHTOPQ9Y3Y2 MIR103A1-201ENST00000362165 78 ntBASIC0.09□□□□□ -2.4
CHTOPQ9Y3Y2 Y_RNA.120-201ENST00000363304 110 ntBASIC0.09□□□□□ -2.4
CHTOPQ9Y3Y2 RNU6-1020P-201ENST00000363684 107 ntBASIC0.09□□□□□ -2.4
CHTOPQ9Y3Y2 Y_RNA.233-201ENST00000364407 101 ntBASIC0.09□□□□□ -2.4
CHTOPQ9Y3Y2 RNU6-1082P-201ENST00000364574 107 ntBASIC0.09□□□□□ -2.4
CHTOPQ9Y3Y2 Y_RNA.337-201ENST00000365312 102 ntBASIC0.09□□□□□ -2.4
CHTOPQ9Y3Y2 Y_RNA.470-201ENST00000384307 117 ntBASIC0.09□□□□□ -2.4
CHTOPQ9Y3Y2 RNU6-463P-201ENST00000384340 107 ntBASIC0.09□□□□□ -2.4
CHTOPQ9Y3Y2 Y_RNA.536-201ENST00000384621 113 ntBASIC0.09□□□□□ -2.4
CHTOPQ9Y3Y2 RNU6-291P-201ENST00000384720 107 ntBASIC0.09□□□□□ -2.4
CHTOPQ9Y3Y2 AL022718.1-201ENST00000412004 84 ntBASIC0.09□□□□□ -2.4
CHTOPQ9Y3Y2 AL512326.2-201ENST00000426359 151 ntBASIC0.09□□□□□ -2.4
CHTOPQ9Y3Y2 SNRPGP12-201ENST00000449481 213 ntBASIC0.09□□□□□ -2.4
CHTOPQ9Y3Y2 RNU7-113P-201ENST00000459273 62 ntBASIC0.09□□□□□ -2.4
CHTOPQ9Y3Y2 AC107027.2-201ENST00000512197 115 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms