Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 MIR1270-201ENST00000459320 83 ntBASIC0.73□□□□□ -2.29
GTF3C4Q9UKN8 RNU2-35P-201ENST00000516446 142 ntBASIC0.73□□□□□ -2.29
GTF3C4Q9UKN8 IGKV1-22-201ENST00000524313 326 ntBASIC0.73□□□□□ -2.29
GTF3C4Q9UKN8 MIR6515-201ENST00000619843 57 ntBASIC0.73□□□□□ -2.29
GTF3C4Q9UKN8 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.72□□□□□ -2.29
GTF3C4Q9UKN8 RNU6-774P-201ENST00000363238 107 ntBASIC0.72□□□□□ -2.29
GTF3C4Q9UKN8 Y_RNA.168-201ENST00000363740 102 ntBASIC0.72□□□□□ -2.29
GTF3C4Q9UKN8 RNU6-580P-201ENST00000365159 107 ntBASIC0.72□□□□□ -2.29
GTF3C4Q9UKN8 RNU6-449P-201ENST00000383914 107 ntBASIC0.72□□□□□ -2.29
GTF3C4Q9UKN8 MIR569-201ENST00000385228 96 ntBASIC0.72□□□□□ -2.29
GTF3C4Q9UKN8 RNU6-1319P-201ENST00000390855 104 ntBASIC0.72□□□□□ -2.29
GTF3C4Q9UKN8 RNU6-747P-201ENST00000390928 104 ntBASIC0.72□□□□□ -2.29
GTF3C4Q9UKN8 RNU6-241P-201ENST00000391148 104 ntBASIC0.72□□□□□ -2.29
GTF3C4Q9UKN8 RNU6-733P-201ENST00000410759 104 ntBASIC0.72□□□□□ -2.29
GTF3C4Q9UKN8 RNU6-177P-201ENST00000411257 104 ntBASIC0.72□□□□□ -2.29
GTF3C4Q9UKN8 AL512326.2-201ENST00000426359 151 ntBASIC0.72□□□□□ -2.29
GTF3C4Q9UKN8 RNU5E-3P-201ENST00000515913 68 ntBASIC0.72□□□□□ -2.29
GTF3C4Q9UKN8 AC004812.1-201ENST00000540773 146 ntBASIC0.72□□□□□ -2.29
GTF3C4Q9UKN8 Y_RNA.757-201ENST00000578934 114 ntBASIC0.72□□□□□ -2.29
GTF3C4Q9UKN8 MIR3668-201ENST00000582138 75 ntBASIC0.72□□□□□ -2.29
GTF3C4Q9UKN8 AL590095.2-201ENST00000604136 117 ntBASIC0.72□□□□□ -2.29
GTF3C4Q9UKN8 AC098479.1-201ENST00000609225 154 ntBASIC0.72□□□□□ -2.29
GTF3C4Q9UKN8 MIR30D-201ENST00000362283 70 ntBASIC0.71□□□□□ -2.3
GTF3C4Q9UKN8 SNORA22.1-201ENST00000362701 134 ntBASIC0.71□□□□□ -2.3
GTF3C4Q9UKN8 Y_RNA.366-201ENST00000365540 102 ntBASIC0.71□□□□□ -2.3
GTF3C4Q9UKN8 Y_RNA.506-201ENST00000384494 102 ntBASIC0.71□□□□□ -2.3
GTF3C4Q9UKN8 Y_RNA.555-201ENST00000384673 110 ntBASIC0.71□□□□□ -2.3
GTF3C4Q9UKN8 SNORD38B-201ENST00000384690 67 ntBASIC0.71□□□□□ -2.3
GTF3C4Q9UKN8 Y_RNA.580-201ENST00000391004 95 ntBASIC0.71□□□□□ -2.3
GTF3C4Q9UKN8 snoU13.2-201ENST00000459201 104 ntBASIC0.71□□□□□ -2.3
GTF3C4Q9UKN8 RNU6-426P-201ENST00000516464 97 ntBASIC0.71□□□□□ -2.3
GTF3C4Q9UKN8 AC022523.2-201ENST00000561045 150 ntBASIC0.71□□□□□ -2.3
GTF3C4Q9UKN8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.71□□□□□ -2.3
GTF3C4Q9UKN8 MIR4771-2-201ENST00000577758 74 ntBASIC0.71□□□□□ -2.3
GTF3C4Q9UKN8 MIR4771-1-201ENST00000582617 74 ntBASIC0.71□□□□□ -2.3
GTF3C4Q9UKN8 SNORD38B-202ENST00000625943 69 ntBASIC0.71□□□□□ -2.3
GTF3C4Q9UKN8 Y_RNA.180-201ENST00000363867 113 ntBASIC0.7□□□□□ -2.3
GTF3C4Q9UKN8 RNY1P6-201ENST00000384193 109 ntBASIC0.7□□□□□ -2.3
GTF3C4Q9UKN8 Y_RNA.584-201ENST00000391090 114 ntBASIC0.7□□□□□ -2.3
GTF3C4Q9UKN8 RNU6-1165P-201ENST00000410119 107 ntBASIC0.7□□□□□ -2.3
GTF3C4Q9UKN8 RNA5SP144-201ENST00000410846 116 ntBASIC0.7□□□□□ -2.3
GTF3C4Q9UKN8 AC096949.1-201ENST00000412047 152 ntBASIC0.7□□□□□ -2.3
GTF3C4Q9UKN8 RNU7-80P-201ENST00000459562 61 ntBASIC0.7□□□□□ -2.3
GTF3C4Q9UKN8 Y_RNA.690-201ENST00000516603 95 ntBASIC0.7□□□□□ -2.3
GTF3C4Q9UKN8 MIR3646-201ENST00000578301 84 ntBASIC0.7□□□□□ -2.3
GTF3C4Q9UKN8 MIR4264-201ENST00000583520 66 ntBASIC0.7□□□□□ -2.3
GTF3C4Q9UKN8 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.7□□□□□ -2.3
GTF3C4Q9UKN8 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.7□□□□□ -2.3
GTF3C4Q9UKN8 MIR1-1-201ENST00000362147 71 ntBASIC0.69□□□□□ -2.3
GTF3C4Q9UKN8 Y_RNA.215-201ENST00000364204 112 ntBASIC0.69□□□□□ -2.3
GTF3C4Q9UKN8 RNU6-915P-201ENST00000364943 103 ntBASIC0.69□□□□□ -2.3
GTF3C4Q9UKN8 RNU6-934P-201ENST00000365154 107 ntBASIC0.69□□□□□ -2.3
GTF3C4Q9UKN8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
GTF3C4Q9UKN8 Y_RNA.420-201ENST00000384043 110 ntBASIC0.69□□□□□ -2.3
GTF3C4Q9UKN8 RNU6-209P-201ENST00000384118 107 ntBASIC0.69□□□□□ -2.3
GTF3C4Q9UKN8 RNU6-1104P-201ENST00000384723 104 ntBASIC0.69□□□□□ -2.3
GTF3C4Q9UKN8 MIR563-201ENST00000385080 79 ntBASIC0.69□□□□□ -2.3
GTF3C4Q9UKN8 MT-TI-201ENST00000387365 69 ntBASIC0.69□□□□□ -2.3
GTF3C4Q9UKN8 MT-TN-201ENST00000387400 73 ntBASIC0.69□□□□□ -2.3
GTF3C4Q9UKN8 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.69□□□□□ -2.3
GTF3C4Q9UKN8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.69□□□□□ -2.3
GTF3C4Q9UKN8 RNU7-200P-201ENST00000516105 62 ntBASIC0.69□□□□□ -2.3
GTF3C4Q9UKN8 RNU7-70P-201ENST00000516941 66 ntBASIC0.69□□□□□ -2.3
GTF3C4Q9UKN8 AC008608.1-201ENST00000603910 127 ntBASIC0.69□□□□□ -2.3
GTF3C4Q9UKN8 AP000753.3-201ENST00000604083 169 ntBASIC0.69□□□□□ -2.3
GTF3C4Q9UKN8 AL589743.1-201ENST00000551932 2712 ntBASIC0.69□□□□□ -2.3
GTF3C4Q9UKN8 RNU6-690P-201ENST00000365242 106 ntBASIC0.68□□□□□ -2.3
GTF3C4Q9UKN8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
GTF3C4Q9UKN8 RNY1P8-201ENST00000383970 114 ntBASIC0.68□□□□□ -2.3
GTF3C4Q9UKN8 SNORA32-201ENST00000384072 121 ntBASIC0.68□□□□□ -2.3
GTF3C4Q9UKN8 SNORA18-201ENST00000384416 132 ntBASIC0.68□□□□□ -2.3
GTF3C4Q9UKN8 MIR598-201ENST00000384868 97 ntBASIC0.68□□□□□ -2.3
GTF3C4Q9UKN8 MIR1827-201ENST00000408549 66 ntBASIC0.68□□□□□ -2.3
GTF3C4Q9UKN8 RNU7-123P-201ENST00000515911 60 ntBASIC0.68□□□□□ -2.3
GTF3C4Q9UKN8 RNA5SP121-201ENST00000516537 101 ntBASIC0.68□□□□□ -2.3
GTF3C4Q9UKN8 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.68□□□□□ -2.3
GTF3C4Q9UKN8 MIR377-201ENST00000362145 69 ntBASIC0.67□□□□□ -2.3
GTF3C4Q9UKN8 Y_RNA.400-201ENST00000383963 111 ntBASIC0.67□□□□□ -2.3
GTF3C4Q9UKN8 Y_RNA.525-201ENST00000384570 113 ntBASIC0.67□□□□□ -2.3
GTF3C4Q9UKN8 U8.15-201ENST00000390947 134 ntBASIC0.67□□□□□ -2.3
GTF3C4Q9UKN8 RNU1-119P-201ENST00000391122 165 ntBASIC0.67□□□□□ -2.3
GTF3C4Q9UKN8 AL603914.1-201ENST00000401964 204 ntBASIC0.67□□□□□ -2.3
GTF3C4Q9UKN8 AC011195.1-201ENST00000578177 177 ntBASIC0.67□□□□□ -2.3
GTF3C4Q9UKN8 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.67□□□□□ -2.3
GTF3C4Q9UKN8 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.67□□□□□ -2.3
GTF3C4Q9UKN8 Y_RNA.120-201ENST00000363304 110 ntBASIC0.66□□□□□ -2.3
GTF3C4Q9UKN8 Y_RNA.430-201ENST00000384081 110 ntBASIC0.66□□□□□ -2.3
GTF3C4Q9UKN8 RNU6-187P-201ENST00000384139 106 ntBASIC0.66□□□□□ -2.3
GTF3C4Q9UKN8 Y_RNA.454-201ENST00000384224 113 ntBASIC0.66□□□□□ -2.3
GTF3C4Q9UKN8 SNORD105-201ENST00000386910 85 ntBASIC0.66□□□□□ -2.3
GTF3C4Q9UKN8 MIR548X2-201ENST00000579776 100 ntBASIC0.66□□□□□ -2.3
GTF3C4Q9UKN8 MIR4676-201ENST00000583078 72 ntBASIC0.66□□□□□ -2.3
GTF3C4Q9UKN8 MIR548AE2-201ENST00000583456 67 ntBASIC0.66□□□□□ -2.3
GTF3C4Q9UKN8 AL359881.1-201ENST00000602916 267 ntBASIC0.66□□□□□ -2.3
GTF3C4Q9UKN8 AL662814.1-201ENST00000617364 121 ntBASIC0.66□□□□□ -2.3
GTF3C4Q9UKN8 RNY1P13-201ENST00000365030 105 ntBASIC0.65□□□□□ -2.31
GTF3C4Q9UKN8 Y_RNA.617-201ENST00000410920 90 ntBASIC0.65□□□□□ -2.31
GTF3C4Q9UKN8 RNU7-185P-201ENST00000459215 60 ntBASIC0.65□□□□□ -2.31
GTF3C4Q9UKN8 RNA5SP480-201ENST00000516840 109 ntBASIC0.65□□□□□ -2.31
GTF3C4Q9UKN8 RNU6-1212P-201ENST00000517023 104 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms