Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MIR3152-201ENST00000579801 74 ntBASIC0.78□□□□□ -2.28
NDE1Q9NXR1 MIR4771-1-201ENST00000582617 74 ntBASIC0.78□□□□□ -2.28
NDE1Q9NXR1 MIR4661-201ENST00000582720 75 ntBASIC0.78□□□□□ -2.28
NDE1Q9NXR1 RNU6-369P-201ENST00000362515 102 ntBASIC0.77□□□□□ -2.29
NDE1Q9NXR1 Y_RNA.120-201ENST00000363304 110 ntBASIC0.77□□□□□ -2.29
NDE1Q9NXR1 Y_RNA.215-201ENST00000364204 112 ntBASIC0.77□□□□□ -2.29
NDE1Q9NXR1 Y_RNA.294-201ENST00000364916 102 ntBASIC0.77□□□□□ -2.29
NDE1Q9NXR1 RNU6-915P-201ENST00000364943 103 ntBASIC0.77□□□□□ -2.29
NDE1Q9NXR1 RNU6-934P-201ENST00000365154 107 ntBASIC0.77□□□□□ -2.29
NDE1Q9NXR1 Y_RNA.420-201ENST00000384043 110 ntBASIC0.77□□□□□ -2.29
NDE1Q9NXR1 MIR569-201ENST00000385228 96 ntBASIC0.77□□□□□ -2.29
NDE1Q9NXR1 RNA5SP144-201ENST00000410846 116 ntBASIC0.77□□□□□ -2.29
NDE1Q9NXR1 MTATP6P21-201ENST00000440681 189 ntBASIC0.77□□□□□ -2.29
NDE1Q9NXR1 PDCD5P2-201ENST00000507570 312 ntBASIC0.77□□□□□ -2.29
NDE1Q9NXR1 RNU6-426P-201ENST00000516464 97 ntBASIC0.77□□□□□ -2.29
NDE1Q9NXR1 MIR548X2-201ENST00000579776 100 ntBASIC0.77□□□□□ -2.29
NDE1Q9NXR1 AC108081.1-201ENST00000604358 221 ntBASIC0.77□□□□□ -2.29
NDE1Q9NXR1 MIR6857-201ENST00000613267 93 ntBASIC0.77□□□□□ -2.29
NDE1Q9NXR1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.77□□□□□ -2.29
NDE1Q9NXR1 Y_RNA.366-201ENST00000365540 102 ntBASIC0.76□□□□□ -2.29
NDE1Q9NXR1 Y_RNA.430-201ENST00000384081 110 ntBASIC0.76□□□□□ -2.29
NDE1Q9NXR1 Y_RNA.464-201ENST00000384282 110 ntBASIC0.76□□□□□ -2.29
NDE1Q9NXR1 Y_RNA.470-201ENST00000384307 117 ntBASIC0.76□□□□□ -2.29
NDE1Q9NXR1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.76□□□□□ -2.29
NDE1Q9NXR1 AL606490.4-201ENST00000423117 127 ntBASIC0.76□□□□□ -2.29
NDE1Q9NXR1 AC067940.1-201ENST00000458411 300 ntBASIC0.76□□□□□ -2.29
NDE1Q9NXR1 RNU7-200P-201ENST00000516105 62 ntBASIC0.76□□□□□ -2.29
NDE1Q9NXR1 MIR4653-201ENST00000585107 83 ntBASIC0.76□□□□□ -2.29
NDE1Q9NXR1 AC021443.1-201ENST00000604478 211 ntBASIC0.76□□□□□ -2.29
NDE1Q9NXR1 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
NDE1Q9NXR1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.76□□□□□ -2.29
NDE1Q9NXR1 MIR30D-201ENST00000362283 70 ntBASIC0.75□□□□□ -2.29
NDE1Q9NXR1 SNORA18-201ENST00000384416 132 ntBASIC0.75□□□□□ -2.29
NDE1Q9NXR1 RNY1P4-201ENST00000384595 115 ntBASIC0.75□□□□□ -2.29
NDE1Q9NXR1 AL603914.1-201ENST00000401964 204 ntBASIC0.75□□□□□ -2.29
NDE1Q9NXR1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.75□□□□□ -2.29
NDE1Q9NXR1 RNA5SP237-201ENST00000410414 113 ntBASIC0.75□□□□□ -2.29
NDE1Q9NXR1 AL512326.2-201ENST00000426359 151 ntBASIC0.75□□□□□ -2.29
NDE1Q9NXR1 RNA5SP255-201ENST00000516370 107 ntBASIC0.75□□□□□ -2.29
NDE1Q9NXR1 RNU2-35P-201ENST00000516446 142 ntBASIC0.75□□□□□ -2.29
NDE1Q9NXR1 AC133485.4-201ENST00000561835 220 ntBASIC0.75□□□□□ -2.29
NDE1Q9NXR1 AC138907.4-201ENST00000570107 226 ntBASIC0.75□□□□□ -2.29
NDE1Q9NXR1 AC020891.4-201ENST00000605745 93 ntBASIC0.75□□□□□ -2.29
NDE1Q9NXR1 AC023934.1-201ENST00000574529 2389 ntBASIC0.75□□□□□ -2.29
NDE1Q9NXR1 SNORA32-201ENST00000384072 121 ntBASIC0.74□□□□□ -2.29
NDE1Q9NXR1 Y_RNA.488-201ENST00000384403 102 ntBASIC0.74□□□□□ -2.29
NDE1Q9NXR1 MIR605-201ENST00000385078 83 ntBASIC0.74□□□□□ -2.29
NDE1Q9NXR1 MIR563-201ENST00000385080 79 ntBASIC0.74□□□□□ -2.29
NDE1Q9NXR1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.74□□□□□ -2.29
NDE1Q9NXR1 MIR1827-201ENST00000408549 66 ntBASIC0.74□□□□□ -2.29
NDE1Q9NXR1 RPS26P5-201ENST00000418544 335 ntBASIC0.74□□□□□ -2.29
NDE1Q9NXR1 FABP5P4-201ENST00000437203 171 ntBASIC0.74□□□□□ -2.29
NDE1Q9NXR1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.74□□□□□ -2.29
NDE1Q9NXR1 RNU7-113P-201ENST00000459273 62 ntBASIC0.74□□□□□ -2.29
NDE1Q9NXR1 PSMC1P5-201ENST00000512850 177 ntBASIC0.74□□□□□ -2.29
NDE1Q9NXR1 RNU6-1212P-201ENST00000517023 104 ntBASIC0.74□□□□□ -2.29
NDE1Q9NXR1 MIR5000-201ENST00000577717 103 ntBASIC0.74□□□□□ -2.29
NDE1Q9NXR1 MIR4305-201ENST00000583252 102 ntBASIC0.74□□□□□ -2.29
NDE1Q9NXR1 AL662814.1-201ENST00000617364 121 ntBASIC0.74□□□□□ -2.29
NDE1Q9NXR1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.74□□□□□ -2.29
NDE1Q9NXR1 MIR6767-201ENST00000637302 66 ntBASIC0.74□□□□□ -2.29
NDE1Q9NXR1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
NDE1Q9NXR1 MIR1-1-201ENST00000362147 71 ntBASIC0.73□□□□□ -2.29
NDE1Q9NXR1 RNU6-774P-201ENST00000363238 107 ntBASIC0.73□□□□□ -2.29
NDE1Q9NXR1 Y_RNA.506-201ENST00000384494 102 ntBASIC0.73□□□□□ -2.29
NDE1Q9NXR1 MIR216A-201ENST00000385063 110 ntBASIC0.73□□□□□ -2.29
NDE1Q9NXR1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.73□□□□□ -2.29
NDE1Q9NXR1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.73□□□□□ -2.29
NDE1Q9NXR1 AL022718.1-201ENST00000412004 84 ntBASIC0.73□□□□□ -2.29
NDE1Q9NXR1 RNU7-164P-201ENST00000459221 62 ntBASIC0.73□□□□□ -2.29
NDE1Q9NXR1 RNU7-123P-201ENST00000515911 60 ntBASIC0.73□□□□□ -2.29
NDE1Q9NXR1 AP001328.1-201ENST00000528550 176 ntBASIC0.73□□□□□ -2.29
NDE1Q9NXR1 MIR4676-201ENST00000583078 72 ntBASIC0.73□□□□□ -2.29
NDE1Q9NXR1 AC011603.4-201ENST00000611325 277 ntBASIC0.73□□□□□ -2.29
NDE1Q9NXR1 AL589743.1-201ENST00000551932 2712 ntBASIC0.72□□□□□ -2.29
NDE1Q9NXR1 RNU7-185P-201ENST00000459215 60 ntBASIC0.72□□□□□ -2.29
NDE1Q9NXR1 RNU6-977P-201ENST00000516411 103 ntBASIC0.72□□□□□ -2.29
NDE1Q9NXR1 RNA5SP33-201ENST00000516687 98 ntBASIC0.72□□□□□ -2.29
NDE1Q9NXR1 AC141846.1-201ENST00000568348 142 ntBASIC0.72□□□□□ -2.29
NDE1Q9NXR1 RN7SL793P-201ENST00000583259 296 ntBASIC0.72□□□□□ -2.29
NDE1Q9NXR1 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.72□□□□□ -2.29
NDE1Q9NXR1 HSBP1P2-201ENST00000299671 229 ntBASIC0.71□□□□□ -2.3
NDE1Q9NXR1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
NDE1Q9NXR1 MIR520F-201ENST00000384824 87 ntBASIC0.71□□□□□ -2.3
NDE1Q9NXR1 SNORD99-201ENST00000408612 74 ntBASIC0.71□□□□□ -2.3
NDE1Q9NXR1 MIR18B-201ENST00000454574 71 ntBASIC0.71□□□□□ -2.3
NDE1Q9NXR1 U7.7-201ENST00000459276 60 ntBASIC0.71□□□□□ -2.3
NDE1Q9NXR1 RNA5SP436-201ENST00000516020 115 ntBASIC0.71□□□□□ -2.3
NDE1Q9NXR1 RNU6-1110P-201ENST00000516462 101 ntBASIC0.71□□□□□ -2.3
NDE1Q9NXR1 AC004812.1-201ENST00000540773 146 ntBASIC0.71□□□□□ -2.3
NDE1Q9NXR1 AC022523.2-201ENST00000561045 150 ntBASIC0.71□□□□□ -2.3
NDE1Q9NXR1 MIR3121-201ENST00000579680 77 ntBASIC0.71□□□□□ -2.3
NDE1Q9NXR1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.71□□□□□ -2.3
NDE1Q9NXR1 MIR1257-201ENST00000408490 117 ntBASIC0.7□□□□□ -2.3
NDE1Q9NXR1 RPL39P25-201ENST00000449384 154 ntBASIC0.7□□□□□ -2.3
NDE1Q9NXR1 RNU6-893P-201ENST00000458841 100 ntBASIC0.7□□□□□ -2.3
NDE1Q9NXR1 Y_RNA.692-201ENST00000516627 105 ntBASIC0.7□□□□□ -2.3
NDE1Q9NXR1 RNY4P20-201ENST00000516678 93 ntBASIC0.7□□□□□ -2.3
NDE1Q9NXR1 IGKV1-22-201ENST00000524313 326 ntBASIC0.7□□□□□ -2.3
NDE1Q9NXR1 MIR548AE2-201ENST00000583456 67 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms