Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
SMC4Q9NTJ3 RNA5SP347-201ENST00000362445 119 ntBASIC0.72□□□□□ -2.29
SMC4Q9NTJ3 Y_RNA.171-201ENST00000363760 102 ntBASIC0.72□□□□□ -2.29
SMC4Q9NTJ3 RNU6-682P-201ENST00000363843 106 ntBASIC0.72□□□□□ -2.29
SMC4Q9NTJ3 Y_RNA.552-201ENST00000384665 112 ntBASIC0.72□□□□□ -2.29
SMC4Q9NTJ3 MIR573-201ENST00000384964 99 ntBASIC0.72□□□□□ -2.29
SMC4Q9NTJ3 AC074198.2-201ENST00000508153 258 ntBASIC0.72□□□□□ -2.29
SMC4Q9NTJ3 AC107027.2-201ENST00000512197 115 ntBASIC0.72□□□□□ -2.29
SMC4Q9NTJ3 RNU2-60P-201ENST00000517290 128 ntBASIC0.72□□□□□ -2.29
SMC4Q9NTJ3 MIR3152-201ENST00000579801 74 ntBASIC0.72□□□□□ -2.29
SMC4Q9NTJ3 AC072026.1-201ENST00000605023 201 ntBASIC0.72□□□□□ -2.29
SMC4Q9NTJ3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
SMC4Q9NTJ3 RNU6-349P-201ENST00000362402 107 ntBASIC0.71□□□□□ -2.3
SMC4Q9NTJ3 SNORD114-23-201ENST00000363536 72 ntBASIC0.71□□□□□ -2.3
SMC4Q9NTJ3 RNA5SP499-201ENST00000363982 119 ntBASIC0.71□□□□□ -2.3
SMC4Q9NTJ3 RNU6-818P-201ENST00000364837 108 ntBASIC0.71□□□□□ -2.3
SMC4Q9NTJ3 Y_RNA.497-201ENST00000384447 98 ntBASIC0.71□□□□□ -2.3
SMC4Q9NTJ3 MIR125B2-201ENST00000385128 89 ntBASIC0.71□□□□□ -2.3
SMC4Q9NTJ3 RNA5SP261-201ENST00000410536 106 ntBASIC0.71□□□□□ -2.3
SMC4Q9NTJ3 RNA5SP222-201ENST00000411039 105 ntBASIC0.71□□□□□ -2.3
SMC4Q9NTJ3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.71□□□□□ -2.3
SMC4Q9NTJ3 AC018659.1-201ENST00000551083 169 ntBASIC0.71□□□□□ -2.3
SMC4Q9NTJ3 Y_RNA.757-201ENST00000578934 114 ntBASIC0.71□□□□□ -2.3
SMC4Q9NTJ3 RNU4-84P-201ENST00000364200 139 ntBASIC0.7□□□□□ -2.3
SMC4Q9NTJ3 Y_RNA.337-201ENST00000365312 102 ntBASIC0.7□□□□□ -2.3
SMC4Q9NTJ3 RNU4-45P-201ENST00000365469 141 ntBASIC0.7□□□□□ -2.3
SMC4Q9NTJ3 RNU7-102P-201ENST00000458948 62 ntBASIC0.7□□□□□ -2.3
SMC4Q9NTJ3 AL662814.1-201ENST00000617364 121 ntBASIC0.7□□□□□ -2.3
SMC4Q9NTJ3 Y_RNA.240-201ENST00000364469 95 ntBASIC0.69□□□□□ -2.3
SMC4Q9NTJ3 Y_RNA.257-201ENST00000364596 102 ntBASIC0.69□□□□□ -2.3
SMC4Q9NTJ3 U8.15-201ENST00000390947 134 ntBASIC0.69□□□□□ -2.3
SMC4Q9NTJ3 RNU6-239P-201ENST00000390990 99 ntBASIC0.69□□□□□ -2.3
SMC4Q9NTJ3 MIR938-201ENST00000401216 83 ntBASIC0.69□□□□□ -2.3
SMC4Q9NTJ3 AC096949.1-201ENST00000412047 152 ntBASIC0.69□□□□□ -2.3
SMC4Q9NTJ3 RNU7-120P-201ENST00000459334 63 ntBASIC0.69□□□□□ -2.3
SMC4Q9NTJ3 RNU7-121P-201ENST00000516604 62 ntBASIC0.69□□□□□ -2.3
SMC4Q9NTJ3 RNU7-156P-201ENST00000517214 74 ntBASIC0.69□□□□□ -2.3
SMC4Q9NTJ3 AC010487.4-201ENST00000637027 61 ntBASIC0.69□□□□□ -2.3
SMC4Q9NTJ3 MIR6844-201ENST00000637122 62 ntBASIC0.69□□□□□ -2.3
SMC4Q9NTJ3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
SMC4Q9NTJ3 RNY1P6-201ENST00000384193 109 ntBASIC0.68□□□□□ -2.3
SMC4Q9NTJ3 SNORA20-201ENST00000384662 132 ntBASIC0.68□□□□□ -2.3
SMC4Q9NTJ3 MIR1257-201ENST00000408490 117 ntBASIC0.68□□□□□ -2.3
SMC4Q9NTJ3 RNA5SP121-201ENST00000516537 101 ntBASIC0.68□□□□□ -2.3
SMC4Q9NTJ3 AC141846.1-201ENST00000568348 142 ntBASIC0.68□□□□□ -2.3
SMC4Q9NTJ3 AC004792.1-201ENST00000614523 137 ntBASIC0.68□□□□□ -2.3
SMC4Q9NTJ3 uc_338.17-201ENST00000619633 179 ntBASIC0.68□□□□□ -2.3
SMC4Q9NTJ3 Y_RNA.357-201ENST00000365487 109 ntBASIC0.67□□□□□ -2.3
SMC4Q9NTJ3 Y_RNA.470-201ENST00000384307 117 ntBASIC0.67□□□□□ -2.3
SMC4Q9NTJ3 SNORA18-201ENST00000384416 132 ntBASIC0.67□□□□□ -2.3
SMC4Q9NTJ3 MT-TF-201ENST00000387314 71 ntBASIC0.67□□□□□ -2.3
SMC4Q9NTJ3 RNA5SP237-201ENST00000410414 113 ntBASIC0.67□□□□□ -2.3
SMC4Q9NTJ3 RNA5SP144-201ENST00000410846 116 ntBASIC0.67□□□□□ -2.3
SMC4Q9NTJ3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.67□□□□□ -2.3
SMC4Q9NTJ3 RNU4-54P-201ENST00000516428 129 ntBASIC0.67□□□□□ -2.3
SMC4Q9NTJ3 MIR3612-201ENST00000579753 87 ntBASIC0.67□□□□□ -2.3
SMC4Q9NTJ3 AL589743.1-201ENST00000551932 2712 ntBASIC0.67□□□□□ -2.3
SMC4Q9NTJ3 SNORA36.2-201ENST00000384004 127 ntBASIC0.66□□□□□ -2.3
SMC4Q9NTJ3 RNU6-364P-201ENST00000384387 107 ntBASIC0.66□□□□□ -2.3
SMC4Q9NTJ3 SNORA75.5-201ENST00000391291 81 ntBASIC0.66□□□□□ -2.3
SMC4Q9NTJ3 SNORD93-201ENST00000408813 74 ntBASIC0.66□□□□□ -2.3
SMC4Q9NTJ3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.66□□□□□ -2.3
SMC4Q9NTJ3 AL512326.2-201ENST00000426359 151 ntBASIC0.66□□□□□ -2.3
SMC4Q9NTJ3 AC092628.1-201ENST00000436250 252 ntBASIC0.66□□□□□ -2.3
SMC4Q9NTJ3 SNORA81.3-201ENST00000517283 198 ntBASIC0.66□□□□□ -2.3
SMC4Q9NTJ3 SNORD92-201ENST00000585078 85 ntBASIC0.66□□□□□ -2.3
SMC4Q9NTJ3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.65□□□□□ -2.3
SMC4Q9NTJ3 MIR18A-201ENST00000362310 71 ntBASIC0.65□□□□□ -2.31
SMC4Q9NTJ3 Y_RNA.374-201ENST00000365606 101 ntBASIC0.65□□□□□ -2.31
SMC4Q9NTJ3 Y_RNA.617-201ENST00000410920 90 ntBASIC0.65□□□□□ -2.31
SMC4Q9NTJ3 RNU6-1135P-201ENST00000411083 103 ntBASIC0.65□□□□□ -2.31
SMC4Q9NTJ3 AL157398.1-201ENST00000452981 186 ntBASIC0.65□□□□□ -2.31
SMC4Q9NTJ3 MIR4711-201ENST00000578274 70 ntBASIC0.65□□□□□ -2.31
SMC4Q9NTJ3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.65□□□□□ -2.31
SMC4Q9NTJ3 MIR8066-201ENST00000617280 78 ntBASIC0.65□□□□□ -2.31
SMC4Q9NTJ3 Y_RNA.29-201ENST00000362570 113 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 RNY1P13-201ENST00000365030 105 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 Y_RNA.441-201ENST00000384123 112 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 Y_RNA.588-201ENST00000391254 102 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 RNU6-447P-201ENST00000410293 104 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 RNA5SP193-201ENST00000410353 107 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 RNU6-1118P-201ENST00000410382 104 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 RNU6-1076P-201ENST00000410397 104 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 RNU6-355P-201ENST00000410427 104 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 RNU6-791P-201ENST00000410467 104 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 RNU6-705P-201ENST00000410601 104 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 RNU6-1100P-201ENST00000410691 104 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 RNU6-860P-201ENST00000410860 104 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 RNU6-1217P-201ENST00000411276 104 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 RNU6-785P-201ENST00000411324 104 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 AC098934.3-201ENST00000430450 190 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 RNU2-35P-201ENST00000516446 142 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 Y_RNA.686-201ENST00000516548 134 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 AC090897.1-201ENST00000580909 226 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 U6.90-201ENST00000614007 104 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 U6.70-201ENST00000620287 104 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 MIR924-201ENST00000638017 53 ntBASIC0.64□□□□□ -2.31
SMC4Q9NTJ3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms