Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 SNORD113.3-201ENST00000364630 78 ntBASIC1.11□□□□□ -2.23
HERPUD2Q9BSE4 Y_RNA.344-201ENST00000365381 112 ntBASIC1.11□□□□□ -2.23
HERPUD2Q9BSE4 MIR499A-201ENST00000384903 122 ntBASIC1.11□□□□□ -2.23
HERPUD2Q9BSE4 MIR1276-201ENST00000408707 83 ntBASIC1.11□□□□□ -2.23
HERPUD2Q9BSE4 MIR1302-7-201ENST00000408841 72 ntBASIC1.11□□□□□ -2.23
HERPUD2Q9BSE4 RNU6-994P-201ENST00000410507 111 ntBASIC1.11□□□□□ -2.23
HERPUD2Q9BSE4 SNORA19.1-201ENST00000410656 129 ntBASIC1.11□□□□□ -2.23
HERPUD2Q9BSE4 AC007012.1-201ENST00000567192 175 ntBASIC1.11□□□□□ -2.23
HERPUD2Q9BSE4 MIR548AO-201ENST00000579992 96 ntBASIC1.11□□□□□ -2.23
HERPUD2Q9BSE4 MIR4295-201ENST00000585286 85 ntBASIC1.11□□□□□ -2.23
HERPUD2Q9BSE4 AC106800.4-201ENST00000614905 153 ntBASIC1.11□□□□□ -2.23
HERPUD2Q9BSE4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-34-201ENST00000362441 82 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-12-201ENST00000362583 82 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-29-201ENST00000362834 82 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-9-201ENST00000362912 82 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-21-201ENST00000362963 81 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-14-201ENST00000363090 81 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-13-201ENST00000363358 82 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-41-201ENST00000363608 82 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-11-201ENST00000363616 82 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-5-201ENST00000363633 82 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-39-201ENST00000363694 82 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-4-201ENST00000363810 82 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-16-201ENST00000363887 82 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-6-201ENST00000363942 82 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-42-201ENST00000364273 82 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-15-201ENST00000364809 81 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 RNU6-1107P-201ENST00000364817 104 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-1-201ENST00000364961 82 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-26-201ENST00000365067 82 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-10-201ENST00000365073 81 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 Y_RNA.328-201ENST00000365208 113 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-43-201ENST00000365503 82 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-36-201ENST00000365629 82 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 MIR488-201ENST00000365739 83 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 Y_RNA.495-201ENST00000384435 112 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORA2B-201ENST00000384583 137 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 RPS3AP1-201ENST00000413190 320 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 AL353813.1-201ENST00000440700 253 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 AC087343.1-201ENST00000477341 475 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 RNU2-13P-201ENST00000515909 113 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 RNA5SP102-201ENST00000516865 106 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 AC036111.3-201ENST00000526389 112 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 SNORD115-40-201ENST00000606510 82 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 RNU6-94P-201ENST00000607728 107 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 AC134878.1-201ENST00000619901 243 ntBASIC1.1□□□□□ -2.23
HERPUD2Q9BSE4 Y_RNA.226-201ENST00000364337 114 ntBASIC1.09□□□□□ -2.23
HERPUD2Q9BSE4 RNU6-654P-201ENST00000364373 107 ntBASIC1.09□□□□□ -2.23
HERPUD2Q9BSE4 RNU1-36P-201ENST00000365130 165 ntBASIC1.09□□□□□ -2.23
HERPUD2Q9BSE4 Y_RNA.323-201ENST00000365157 109 ntBASIC1.09□□□□□ -2.23
HERPUD2Q9BSE4 Y_RNA.346-201ENST00000365385 112 ntBASIC1.09□□□□□ -2.23
HERPUD2Q9BSE4 RNU6-1189P-201ENST00000383958 107 ntBASIC1.09□□□□□ -2.23
HERPUD2Q9BSE4 RNU6-49P-201ENST00000384256 107 ntBASIC1.09□□□□□ -2.23
HERPUD2Q9BSE4 RNU6-880P-201ENST00000384526 107 ntBASIC1.09□□□□□ -2.23
HERPUD2Q9BSE4 RNU6-613P-201ENST00000410412 108 ntBASIC1.09□□□□□ -2.23
HERPUD2Q9BSE4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.09□□□□□ -2.23
HERPUD2Q9BSE4 snoU13.16-201ENST00000459350 104 ntBASIC1.09□□□□□ -2.23
HERPUD2Q9BSE4 COX6CP6-201ENST00000490840 228 ntBASIC1.09□□□□□ -2.23
HERPUD2Q9BSE4 RNU7-123P-201ENST00000515911 60 ntBASIC1.09□□□□□ -2.23
HERPUD2Q9BSE4 RNU6-113P-201ENST00000516653 101 ntBASIC1.09□□□□□ -2.23
HERPUD2Q9BSE4 RNY4P20-201ENST00000516678 93 ntBASIC1.09□□□□□ -2.23
HERPUD2Q9BSE4 AL020996.3-201ENST00000606617 222 ntBASIC1.09□□□□□ -2.23
HERPUD2Q9BSE4 AP001318.4-201ENST00000616637 121 ntBASIC1.09□□□□□ -2.23
HERPUD2Q9BSE4 AC087741.2-201ENST00000619415 172 ntBASIC1.09□□□□□ -2.23
HERPUD2Q9BSE4 Y_RNA.198-201ENST00000364013 98 ntBASIC1.08□□□□□ -2.24
HERPUD2Q9BSE4 Y_RNA.298-201ENST00000364960 107 ntBASIC1.08□□□□□ -2.24
HERPUD2Q9BSE4 Y_RNA.309-201ENST00000365046 111 ntBASIC1.08□□□□□ -2.24
HERPUD2Q9BSE4 Y_RNA.362-201ENST00000365518 110 ntBASIC1.08□□□□□ -2.24
HERPUD2Q9BSE4 SNORD18B-201ENST00000365659 72 ntBASIC1.08□□□□□ -2.24
HERPUD2Q9BSE4 RNU6-1014P-201ENST00000383940 103 ntBASIC1.08□□□□□ -2.24
HERPUD2Q9BSE4 Y_RNA.410-201ENST00000383992 113 ntBASIC1.08□□□□□ -2.24
HERPUD2Q9BSE4 SNORD12C-201ENST00000386307 89 ntBASIC1.08□□□□□ -2.24
HERPUD2Q9BSE4 AL512326.2-201ENST00000426359 151 ntBASIC1.08□□□□□ -2.24
HERPUD2Q9BSE4 RNU7-45P-201ENST00000459460 63 ntBASIC1.08□□□□□ -2.24
HERPUD2Q9BSE4 ACA64.5-201ENST00000516207 127 ntBASIC1.08□□□□□ -2.24
HERPUD2Q9BSE4 RNU6-109P-201ENST00000516364 107 ntBASIC1.08□□□□□ -2.24
HERPUD2Q9BSE4 RNA5SP255-201ENST00000516370 107 ntBASIC1.08□□□□□ -2.24
HERPUD2Q9BSE4 RNU6-184P-201ENST00000516514 107 ntBASIC1.08□□□□□ -2.24
HERPUD2Q9BSE4 AP003484.1-201ENST00000530974 250 ntBASIC1.08□□□□□ -2.24
HERPUD2Q9BSE4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.08□□□□□ -2.24
HERPUD2Q9BSE4 MIR6504-201ENST00000613520 61 ntBASIC1.08□□□□□ -2.24
HERPUD2Q9BSE4 AC091932.4-201ENST00000623386 200 ntBASIC1.08□□□□□ -2.24
HERPUD2Q9BSE4 U8.6-201ENST00000364939 135 ntBASIC1.07□□□□□ -2.24
HERPUD2Q9BSE4 SNORA26.6-201ENST00000391256 115 ntBASIC1.07□□□□□ -2.24
HERPUD2Q9BSE4 RNU6-1190P-201ENST00000410811 104 ntBASIC1.07□□□□□ -2.24
HERPUD2Q9BSE4 RNA5SP136-201ENST00000410906 107 ntBASIC1.07□□□□□ -2.24
HERPUD2Q9BSE4 MTATP6P21-201ENST00000440681 189 ntBASIC1.07□□□□□ -2.24
HERPUD2Q9BSE4 RNU6-958P-201ENST00000516995 106 ntBASIC1.07□□□□□ -2.24
HERPUD2Q9BSE4 AP000753.3-201ENST00000604083 169 ntBASIC1.07□□□□□ -2.24
HERPUD2Q9BSE4 Y_RNA.773-201ENST00000607168 90 ntBASIC1.07□□□□□ -2.24
HERPUD2Q9BSE4 AL136317.1-201ENST00000612653 226 ntBASIC1.07□□□□□ -2.24
HERPUD2Q9BSE4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
HERPUD2Q9BSE4 Y_RNA.163-201ENST00000363702 113 ntBASIC1.06□□□□□ -2.24
HERPUD2Q9BSE4 Y_RNA.369-201ENST00000365568 117 ntBASIC1.06□□□□□ -2.24
HERPUD2Q9BSE4 MIR590-201ENST00000385008 97 ntBASIC1.06□□□□□ -2.24
HERPUD2Q9BSE4 SNORD89-201ENST00000390981 114 ntBASIC1.06□□□□□ -2.24
HERPUD2Q9BSE4 MIR1287-201ENST00000408492 90 ntBASIC1.06□□□□□ -2.24
HERPUD2Q9BSE4 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
HERPUD2Q9BSE4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 249.1 ms