Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 DNAJC19P2-201ENST00000593340 302 ntBASIC0.6□□□□□ -2.31
KRT39Q6A163 MIR6515-201ENST00000619843 57 ntBASIC0.6□□□□□ -2.31
KRT39Q6A163 MIR6717-201ENST00000622747 73 ntBASIC0.6□□□□□ -2.31
KRT39Q6A163 AC091932.4-201ENST00000623386 200 ntBASIC0.6□□□□□ -2.31
KRT39Q6A163 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
KRT39Q6A163 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
KRT39Q6A163 MIR30D-201ENST00000362283 70 ntBASIC0.59□□□□□ -2.31
KRT39Q6A163 RNU6-508P-201ENST00000363231 103 ntBASIC0.59□□□□□ -2.31
KRT39Q6A163 SNORA25.7-201ENST00000364375 127 ntBASIC0.59□□□□□ -2.31
KRT39Q6A163 Y_RNA.251-201ENST00000364551 99 ntBASIC0.59□□□□□ -2.31
KRT39Q6A163 Y_RNA.351-201ENST00000365436 96 ntBASIC0.59□□□□□ -2.31
KRT39Q6A163 Y_RNA.464-201ENST00000384282 110 ntBASIC0.59□□□□□ -2.31
KRT39Q6A163 Y_RNA.497-201ENST00000384447 98 ntBASIC0.59□□□□□ -2.31
KRT39Q6A163 Y_RNA.506-201ENST00000384494 102 ntBASIC0.59□□□□□ -2.31
KRT39Q6A163 MIR489-201ENST00000384923 84 ntBASIC0.59□□□□□ -2.31
KRT39Q6A163 SNORA75.5-201ENST00000391291 81 ntBASIC0.59□□□□□ -2.31
KRT39Q6A163 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.59□□□□□ -2.31
KRT39Q6A163 RNU6-1149P-201ENST00000516810 97 ntBASIC0.59□□□□□ -2.31
KRT39Q6A163 RNU6-1223P-201ENST00000517124 104 ntBASIC0.59□□□□□ -2.31
KRT39Q6A163 Y_RNA.778-201ENST00000620203 90 ntBASIC0.59□□□□□ -2.31
KRT39Q6A163 RNU6-151P-201ENST00000364158 107 ntBASIC0.58□□□□□ -2.32
KRT39Q6A163 RNU6-449P-201ENST00000383914 107 ntBASIC0.58□□□□□ -2.32
KRT39Q6A163 SNORA36.2-201ENST00000384004 127 ntBASIC0.58□□□□□ -2.32
KRT39Q6A163 RNA5SP272-201ENST00000516095 111 ntBASIC0.58□□□□□ -2.32
KRT39Q6A163 RNU7-200P-201ENST00000516105 62 ntBASIC0.58□□□□□ -2.32
KRT39Q6A163 RNU6-346P-201ENST00000516288 111 ntBASIC0.58□□□□□ -2.32
KRT39Q6A163 RNU4-54P-201ENST00000516428 129 ntBASIC0.58□□□□□ -2.32
KRT39Q6A163 Y_RNA.686-201ENST00000516548 134 ntBASIC0.58□□□□□ -2.32
KRT39Q6A163 MIR3646-201ENST00000578301 84 ntBASIC0.58□□□□□ -2.32
KRT39Q6A163 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.58□□□□□ -2.32
KRT39Q6A163 MIR6844-201ENST00000637122 62 ntBASIC0.58□□□□□ -2.32
KRT39Q6A163 MIR569-201ENST00000385228 96 ntBASIC0.57□□□□□ -2.32
KRT39Q6A163 SNORD37.2-201ENST00000391075 66 ntBASIC0.57□□□□□ -2.32
KRT39Q6A163 RNU6-460P-201ENST00000391158 108 ntBASIC0.57□□□□□ -2.32
KRT39Q6A163 MIR938-201ENST00000401216 83 ntBASIC0.57□□□□□ -2.32
KRT39Q6A163 RNU7-185P-201ENST00000459215 60 ntBASIC0.57□□□□□ -2.32
KRT39Q6A163 SNORA25.12-201ENST00000516202 82 ntBASIC0.57□□□□□ -2.32
KRT39Q6A163 AC112693.2-201ENST00000556538 232 ntBASIC0.57□□□□□ -2.32
KRT39Q6A163 MIR5000-201ENST00000577717 103 ntBASIC0.57□□□□□ -2.32
KRT39Q6A163 MIR3612-201ENST00000579753 87 ntBASIC0.57□□□□□ -2.32
KRT39Q6A163 AC008608.1-201ENST00000603910 127 ntBASIC0.57□□□□□ -2.32
KRT39Q6A163 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
KRT39Q6A163 MIR302B-201ENST00000362188 73 ntBASIC0.56□□□□□ -2.32
KRT39Q6A163 MIR18A-201ENST00000362310 71 ntBASIC0.56□□□□□ -2.32
KRT39Q6A163 RNU6-774P-201ENST00000363238 107 ntBASIC0.56□□□□□ -2.32
KRT39Q6A163 Y_RNA.215-201ENST00000364204 112 ntBASIC0.56□□□□□ -2.32
KRT39Q6A163 RNU6-1062P-201ENST00000383908 107 ntBASIC0.56□□□□□ -2.32
KRT39Q6A163 Y_RNA.400-201ENST00000383963 111 ntBASIC0.56□□□□□ -2.32
KRT39Q6A163 SNORA20-201ENST00000384662 132 ntBASIC0.56□□□□□ -2.32
KRT39Q6A163 MIR125B2-201ENST00000385128 89 ntBASIC0.56□□□□□ -2.32
KRT39Q6A163 MIR140-201ENST00000385282 100 ntBASIC0.56□□□□□ -2.32
KRT39Q6A163 MT-TF-201ENST00000387314 71 ntBASIC0.56□□□□□ -2.32
KRT39Q6A163 MIR1257-201ENST00000408490 117 ntBASIC0.56□□□□□ -2.32
KRT39Q6A163 Y_RNA.651-201ENST00000459380 103 ntBASIC0.56□□□□□ -2.32
KRT39Q6A163 RNU6-426P-201ENST00000516464 97 ntBASIC0.56□□□□□ -2.32
KRT39Q6A163 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.56□□□□□ -2.32
KRT39Q6A163 AC022709.1-201ENST00000615967 87 ntBASIC0.56□□□□□ -2.32
KRT39Q6A163 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
KRT39Q6A163 AL596211.1-201ENST00000569873 2277 ntBASIC0.55□□□□□ -2.32
KRT39Q6A163 RNA5SP499-201ENST00000363982 119 ntBASIC0.55□□□□□ -2.32
KRT39Q6A163 RNU4-16P-201ENST00000364737 141 ntBASIC0.55□□□□□ -2.32
KRT39Q6A163 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
KRT39Q6A163 RNY1P5-201ENST00000383890 115 ntBASIC0.55□□□□□ -2.32
KRT39Q6A163 Y_RNA.420-201ENST00000384043 110 ntBASIC0.55□□□□□ -2.32
KRT39Q6A163 RNU6-1237P-201ENST00000384777 107 ntBASIC0.55□□□□□ -2.32
KRT39Q6A163 RNU7-80P-201ENST00000459562 61 ntBASIC0.55□□□□□ -2.32
KRT39Q6A163 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
KRT39Q6A163 AC018659.1-201ENST00000551083 169 ntBASIC0.55□□□□□ -2.32
KRT39Q6A163 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.55□□□□□ -2.32
KRT39Q6A163 MIR6841-201ENST00000637129 72 ntBASIC0.55□□□□□ -2.32
KRT39Q6A163 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.55□□□□□ -2.32
KRT39Q6A163 RNU6-349P-201ENST00000362402 107 ntBASIC0.54□□□□□ -2.32
KRT39Q6A163 RNU6-309P-201ENST00000364573 106 ntBASIC0.54□□□□□ -2.32
KRT39Q6A163 RNU1-133P-201ENST00000364867 167 ntBASIC0.54□□□□□ -2.32
KRT39Q6A163 Y_RNA.294-201ENST00000364916 102 ntBASIC0.54□□□□□ -2.32
KRT39Q6A163 Y_RNA.430-201ENST00000384081 110 ntBASIC0.54□□□□□ -2.32
KRT39Q6A163 RNU6-187P-201ENST00000384139 106 ntBASIC0.54□□□□□ -2.32
KRT39Q6A163 Y_RNA.454-201ENST00000384224 113 ntBASIC0.54□□□□□ -2.32
KRT39Q6A163 RNU6-1319P-201ENST00000390855 104 ntBASIC0.54□□□□□ -2.32
KRT39Q6A163 RNU6-747P-201ENST00000390928 104 ntBASIC0.54□□□□□ -2.32
KRT39Q6A163 Y_RNA.584-201ENST00000391090 114 ntBASIC0.54□□□□□ -2.32
KRT39Q6A163 RNU6-241P-201ENST00000391148 104 ntBASIC0.54□□□□□ -2.32
KRT39Q6A163 RNA5SP261-201ENST00000410536 106 ntBASIC0.54□□□□□ -2.32
KRT39Q6A163 AC092628.1-201ENST00000436250 252 ntBASIC0.54□□□□□ -2.32
KRT39Q6A163 RNU7-102P-201ENST00000458948 62 ntBASIC0.54□□□□□ -2.32
KRT39Q6A163 MIR548X2-201ENST00000579776 100 ntBASIC0.54□□□□□ -2.32
KRT39Q6A163 MIR3133-201ENST00000583157 78 ntBASIC0.54□□□□□ -2.32
KRT39Q6A163 SNORD92-201ENST00000585078 85 ntBASIC0.54□□□□□ -2.32
KRT39Q6A163 AC108081.1-201ENST00000604358 221 ntBASIC0.54□□□□□ -2.32
KRT39Q6A163 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
KRT39Q6A163 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.54□□□□□ -2.32
KRT39Q6A163 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
KRT39Q6A163 RNA5SP347-201ENST00000362445 119 ntBASIC0.53□□□□□ -2.32
KRT39Q6A163 Y_RNA.120-201ENST00000363304 110 ntBASIC0.53□□□□□ -2.32
KRT39Q6A163 SNORD18A-201ENST00000363753 72 ntBASIC0.53□□□□□ -2.32
KRT39Q6A163 Y_RNA.280-201ENST00000364765 112 ntBASIC0.53□□□□□ -2.32
KRT39Q6A163 RNU6-915P-201ENST00000364943 103 ntBASIC0.53□□□□□ -2.32
KRT39Q6A163 Y_RNA.354-201ENST00000365448 111 ntBASIC0.53□□□□□ -2.32
KRT39Q6A163 RNY1P6-201ENST00000384193 109 ntBASIC0.53□□□□□ -2.32
KRT39Q6A163 Y_RNA.488-201ENST00000384403 102 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms