Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 MIR518B-201ENST00000385127 83 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 SNORA26.8-201ENST00000391306 124 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 MIR190B-201ENST00000401119 79 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 SNORD63B-201ENST00000411005 70 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 MTCO2P19-201ENST00000427513 598 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 AL356010.1-201ENST00000456364 102 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 MTND2P31-201ENST00000512602 616 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.28□□□□□ -2.45
COL7A1Q02388 AL158211.2-201ENST00000607282 395 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 AC068137.3-201ENST00000639191 341 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 RNU6-845P-201ENST00000362578 103 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 SNORD81.1-201ENST00000363064 77 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 RNU6-626P-201ENST00000363354 107 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 SNORD114-4-201ENST00000363962 75 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 RNY3P11-201ENST00000364153 102 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 SNORA51.5-201ENST00000384126 131 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 MIR122-201ENST00000385044 85 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 MIR527-201ENST00000385244 85 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 AL590004.1-201ENST00000405321 300 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 RNU6-721P-201ENST00000410155 105 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 RNU6-383P-201ENST00000410864 94 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL7A1Q02388 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL7A1Q02388 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL7A1Q02388 NBR2-204ENST00000587322 63 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 RNU6-89P-201ENST00000606519 100 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 AL021707.8-201ENST00000609428 183 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 MIR6818-201ENST00000621576 65 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 MIR664B-201ENST00000626756 61 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 RNU6-500P-201ENST00000362349 107 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 RNU6-235P-201ENST00000362644 107 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 RNU6-1214P-201ENST00000363650 109 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 SNORD18.1-201ENST00000363807 70 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 RNU6-484P-201ENST00000384016 107 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 SNORA72.4-201ENST00000384174 132 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 RNU6-476P-201ENST00000384726 107 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 MIR628-201ENST00000385229 95 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 MIR216B-201ENST00000390186 82 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
COL7A1Q02388 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 RNU6-337P-201ENST00000391243 106 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 AF228730.4-201ENST00000421457 183 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL7A1Q02388 MTND3P16-201ENST00000452205 344 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 RNU7-24P-201ENST00000458867 62 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 MIR2053-201ENST00000459295 91 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 RNU6-1213P-201ENST00000517075 94 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.29□□□□□ -2.46
COL7A1Q02388 AC009094.1-201ENST00000564443 426 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 AC084782.3-201ENST00000612282 578 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 AC069503.3-201ENST00000618674 145 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 AP000720.1-201ENST00000625091 483 ntBASIC-0.29□□□□□ -2.46
COL7A1Q02388 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 RNU6-553P-201ENST00000364047 96 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 RNU6-900P-201ENST00000384498 102 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 SNORA20-201ENST00000384662 132 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 Y_RNA.566-201ENST00000384735 101 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 SNORD77B-201ENST00000391112 67 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 RNU6-101P-201ENST00000410323 104 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 MTND4P28-201ENST00000426217 387 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 RNU7-48P-201ENST00000458875 63 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 RNU6-625P-201ENST00000459412 107 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 snoU109.3-201ENST00000459477 145 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 RNU6-232P-201ENST00000517144 64 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.3□□□□□ -2.46
COL7A1Q02388 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.3□□□□□ -2.46
COL7A1Q02388 AC005014.3-201ENST00000605985 190 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 AC024933.1-201ENST00000608472 348 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 AL157392.4-201ENST00000609756 345 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 AC091932.4-201ENST00000623386 200 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 snoR1.1-201ENST00000628177 80 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 U6.100-201ENST00000636230 99 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 MIR1321-201ENST00000637766 79 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 RNY1P11-201ENST00000363759 113 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 SNORD114-17-201ENST00000364699 75 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 RNU6-20P-201ENST00000384106 107 ntBASIC-0.3□□□□□ -2.46
COL7A1Q02388 RNU6-413P-201ENST00000384115 107 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 258.5 ms