Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 MIR6082-201ENST00000613604 109 ntBASIC0.23□□□□□ -2.37
LIM2P55344 MIR924-201ENST00000638017 53 ntBASIC0.23□□□□□ -2.37
LIM2P55344 Y_RNA.571-201ENST00000384753 98 ntBASIC0.22□□□□□ -2.37
LIM2P55344 Y_RNA.588-201ENST00000391254 102 ntBASIC0.22□□□□□ -2.37
LIM2P55344 AL512326.2-201ENST00000426359 151 ntBASIC0.22□□□□□ -2.37
LIM2P55344 MTCYBP9-201ENST00000431021 303 ntBASIC0.22□□□□□ -2.37
LIM2P55344 RNU6-1194P-201ENST00000516208 104 ntBASIC0.22□□□□□ -2.37
LIM2P55344 Y_RNA.668-201ENST00000516233 93 ntBASIC0.22□□□□□ -2.37
LIM2P55344 RNU6-1149P-201ENST00000516810 97 ntBASIC0.22□□□□□ -2.37
LIM2P55344 Y_RNA.13-201ENST00000362403 112 ntBASIC0.21□□□□□ -2.38
LIM2P55344 Y_RNA.435-201ENST00000384095 112 ntBASIC0.21□□□□□ -2.38
LIM2P55344 RNU6-493P-201ENST00000391321 108 ntBASIC0.21□□□□□ -2.38
LIM2P55344 Y_RNA.626-201ENST00000411288 95 ntBASIC0.21□□□□□ -2.38
LIM2P55344 AC096949.1-201ENST00000412047 152 ntBASIC0.21□□□□□ -2.38
LIM2P55344 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.21□□□□□ -2.38
LIM2P55344 RNU4-71P-201ENST00000516258 113 ntBASIC0.21□□□□□ -2.38
LIM2P55344 SNORA62.5-201ENST00000516634 120 ntBASIC0.21□□□□□ -2.38
LIM2P55344 MIR4491-201ENST00000581087 68 ntBASIC0.21□□□□□ -2.38
LIM2P55344 AL360085.1-201ENST00000604713 532 ntBASIC0.21□□□□□ -2.38
LIM2P55344 AC078938.1-201ENST00000620993 318 ntBASIC0.21□□□□□ -2.38
LIM2P55344 MIR330-201ENST00000362196 94 ntBASIC0.2□□□□□ -2.38
LIM2P55344 Y_RNA.75-201ENST00000362927 97 ntBASIC0.2□□□□□ -2.38
LIM2P55344 Y_RNA.133-201ENST00000363428 110 ntBASIC0.2□□□□□ -2.38
LIM2P55344 RNY1P6-201ENST00000384193 109 ntBASIC0.2□□□□□ -2.38
LIM2P55344 Y_RNA.539-201ENST00000384635 107 ntBASIC0.2□□□□□ -2.38
LIM2P55344 Y_RNA.567-201ENST00000384736 106 ntBASIC0.2□□□□□ -2.38
LIM2P55344 MTND2P23-201ENST00000422990 651 ntBASIC0.2□□□□□ -2.38
LIM2P55344 MRPS18CP4-201ENST00000535821 231 ntBASIC0.2□□□□□ -2.38
LIM2P55344 AC133485.4-201ENST00000561835 220 ntBASIC0.2□□□□□ -2.38
LIM2P55344 MIR4308-201ENST00000580634 81 ntBASIC0.2□□□□□ -2.38
LIM2P55344 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
LIM2P55344 MIR103A1-201ENST00000362165 78 ntBASIC0.19□□□□□ -2.38
LIM2P55344 RNU6-403P-201ENST00000363163 104 ntBASIC0.19□□□□□ -2.38
LIM2P55344 SNORA36.1-201ENST00000363424 132 ntBASIC0.19□□□□□ -2.38
LIM2P55344 Y_RNA.182-201ENST00000363880 111 ntBASIC0.19□□□□□ -2.38
LIM2P55344 SNORD27-201ENST00000363981 72 ntBASIC0.19□□□□□ -2.38
LIM2P55344 RNU6-694P-201ENST00000364071 147 ntBASIC0.19□□□□□ -2.38
LIM2P55344 Y_RNA.350-201ENST00000365409 98 ntBASIC0.19□□□□□ -2.38
LIM2P55344 SNORA18-201ENST00000384416 132 ntBASIC0.19□□□□□ -2.38
LIM2P55344 RNU4-70P-201ENST00000384579 139 ntBASIC0.19□□□□□ -2.38
LIM2P55344 MIR7-2-201ENST00000384970 110 ntBASIC0.19□□□□□ -2.38
LIM2P55344 Y_RNA.617-201ENST00000410920 90 ntBASIC0.19□□□□□ -2.38
LIM2P55344 SNRPGP12-201ENST00000449481 213 ntBASIC0.19□□□□□ -2.38
LIM2P55344 RNU6-848P-201ENST00000515948 107 ntBASIC0.19□□□□□ -2.38
LIM2P55344 RNU6-617P-201ENST00000516147 107 ntBASIC0.19□□□□□ -2.38
LIM2P55344 RNU6-473P-201ENST00000516164 107 ntBASIC0.19□□□□□ -2.38
LIM2P55344 RNU6-1049P-201ENST00000516414 107 ntBASIC0.19□□□□□ -2.38
LIM2P55344 Y_RNA.757-201ENST00000578934 114 ntBASIC0.19□□□□□ -2.38
LIM2P55344 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.19□□□□□ -2.38
LIM2P55344 Y_RNA.65-201ENST00000362846 100 ntBASIC0.18□□□□□ -2.38
LIM2P55344 RNY1P13-201ENST00000365030 105 ntBASIC0.18□□□□□ -2.38
LIM2P55344 MIR4431-201ENST00000579990 94 ntBASIC0.18□□□□□ -2.38
LIM2P55344 MIR6828-201ENST00000636181 60 ntBASIC0.18□□□□□ -2.38
LIM2P55344 SNORD115-2-201ENST00000362842 82 ntBASIC0.17□□□□□ -2.38
LIM2P55344 RNU6-923P-201ENST00000364753 107 ntBASIC0.17□□□□□ -2.38
LIM2P55344 SNORD115-20-201ENST00000365099 82 ntBASIC0.17□□□□□ -2.38
LIM2P55344 MIR568-201ENST00000385036 95 ntBASIC0.17□□□□□ -2.38
LIM2P55344 MIR644A-201ENST00000385262 94 ntBASIC0.17□□□□□ -2.38
LIM2P55344 RNU2-59P-201ENST00000410482 191 ntBASIC0.17□□□□□ -2.38
LIM2P55344 RNU7-35P-201ENST00000517174 62 ntBASIC0.17□□□□□ -2.38
LIM2P55344 MIR4639-201ENST00000584938 69 ntBASIC0.17□□□□□ -2.38
LIM2P55344 AC023932.2-201ENST00000603176 175 ntBASIC0.17□□□□□ -2.38
LIM2P55344 SNORA25.18-201ENST00000607153 114 ntBASIC0.17□□□□□ -2.38
LIM2P55344 AC011603.4-201ENST00000611325 277 ntBASIC0.17□□□□□ -2.38
LIM2P55344 MIR4315-1-201ENST00000636800 73 ntBASIC0.17□□□□□ -2.38
LIM2P55344 MIR4315-2-201ENST00000640925 73 ntBASIC0.17□□□□□ -2.38
LIM2P55344 MTND5P32-201ENST00000560711 1802 ntBASIC0.17□□□□□ -2.38
LIM2P55344 RNA5SP62-201ENST00000363457 110 ntBASIC0.16□□□□□ -2.38
LIM2P55344 Y_RNA.205-201ENST00000364128 113 ntBASIC0.16□□□□□ -2.38
LIM2P55344 Y_RNA.536-201ENST00000384621 113 ntBASIC0.16□□□□□ -2.38
LIM2P55344 RNA5SP144-201ENST00000410846 116 ntBASIC0.16□□□□□ -2.38
LIM2P55344 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.16□□□□□ -2.38
LIM2P55344 RNU7-79P-201ENST00000516082 62 ntBASIC0.16□□□□□ -2.38
LIM2P55344 RNU6-1023P-201ENST00000516137 106 ntBASIC0.16□□□□□ -2.38
LIM2P55344 RNU6-327P-201ENST00000516270 127 ntBASIC0.16□□□□□ -2.38
LIM2P55344 SNORA31.14-201ENST00000516728 116 ntBASIC0.16□□□□□ -2.38
LIM2P55344 RNU6-1258P-201ENST00000516911 111 ntBASIC0.16□□□□□ -2.38
LIM2P55344 SCARNA16.5-201ENST00000517114 183 ntBASIC0.16□□□□□ -2.38
LIM2P55344 AC062037.2-201ENST00000610137 73 ntBASIC0.16□□□□□ -2.38
LIM2P55344 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
LIM2P55344 MIR8087-201ENST00000612745 78 ntBASIC0.16□□□□□ -2.38
LIM2P55344 MIR6779-201ENST00000617283 64 ntBASIC0.16□□□□□ -2.38
LIM2P55344 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
LIM2P55344 Y_RNA.32-201ENST00000362589 110 ntBASIC0.15□□□□□ -2.39
LIM2P55344 RNU6-1229P-201ENST00000364295 107 ntBASIC0.15□□□□□ -2.39
LIM2P55344 RNU4-16P-201ENST00000364737 141 ntBASIC0.15□□□□□ -2.39
LIM2P55344 Y_RNA.412-201ENST00000384001 104 ntBASIC0.15□□□□□ -2.39
LIM2P55344 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
LIM2P55344 AL022718.1-201ENST00000412004 84 ntBASIC0.15□□□□□ -2.39
LIM2P55344 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.15□□□□□ -2.39
LIM2P55344 RNA5SP268-201ENST00000516828 124 ntBASIC0.15□□□□□ -2.39
LIM2P55344 AC112693.2-201ENST00000556538 232 ntBASIC0.15□□□□□ -2.39
LIM2P55344 U6.106-201ENST00000636360 105 ntBASIC0.15□□□□□ -2.39
LIM2P55344 Y_RNA.171-201ENST00000363760 102 ntBASIC0.14□□□□□ -2.39
LIM2P55344 Y_RNA.477-201ENST00000384352 108 ntBASIC0.14□□□□□ -2.39
LIM2P55344 Y_RNA.521-201ENST00000384560 114 ntBASIC0.14□□□□□ -2.39
LIM2P55344 RNU6-291P-201ENST00000384720 107 ntBASIC0.14□□□□□ -2.39
LIM2P55344 RNA5SP236-201ENST00000516169 116 ntBASIC0.14□□□□□ -2.39
LIM2P55344 Y_RNA.697-201ENST00000516776 113 ntBASIC0.14□□□□□ -2.39
LIM2P55344 RNA5SP47-201ENST00000517230 109 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 223.3 ms