Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MIR140-201ENST00000385282 100 ntBASIC0.53□□□□□ -2.32
LIMK1P53667 MIR4719-201ENST00000585233 84 ntBASIC0.53□□□□□ -2.32
LIMK1P53667 AC023932.2-201ENST00000603176 175 ntBASIC0.53□□□□□ -2.32
LIMK1P53667 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.53□□□□□ -2.33
LIMK1P53667 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.33
LIMK1P53667 MIR30D-201ENST00000362283 70 ntBASIC0.52□□□□□ -2.33
LIMK1P53667 Y_RNA.60-201ENST00000362831 98 ntBASIC0.52□□□□□ -2.33
LIMK1P53667 RNU6-978P-201ENST00000364371 103 ntBASIC0.52□□□□□ -2.33
LIMK1P53667 Y_RNA.274-201ENST00000364714 101 ntBASIC0.52□□□□□ -2.33
LIMK1P53667 RNU4-45P-201ENST00000365469 141 ntBASIC0.52□□□□□ -2.33
LIMK1P53667 Y_RNA.515-201ENST00000384535 112 ntBASIC0.52□□□□□ -2.33
LIMK1P53667 MIR563-201ENST00000385080 79 ntBASIC0.52□□□□□ -2.33
LIMK1P53667 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
LIMK1P53667 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.52□□□□□ -2.33
LIMK1P53667 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.52□□□□□ -2.33
LIMK1P53667 RNU6-1149P-201ENST00000516810 97 ntBASIC0.52□□□□□ -2.33
LIMK1P53667 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
LIMK1P53667 AC021613.1-201ENST00000623880 111 ntBASIC0.52□□□□□ -2.33
LIMK1P53667 SNORA22.1-201ENST00000362701 134 ntBASIC0.51□□□□□ -2.33
LIMK1P53667 RNU6-275P-201ENST00000364910 107 ntBASIC0.51□□□□□ -2.33
LIMK1P53667 Y_RNA.430-201ENST00000384081 110 ntBASIC0.51□□□□□ -2.33
LIMK1P53667 Y_RNA.447-201ENST00000384184 113 ntBASIC0.51□□□□□ -2.33
LIMK1P53667 MIR624-201ENST00000385217 97 ntBASIC0.51□□□□□ -2.33
LIMK1P53667 RNU4-83P-201ENST00000410863 133 ntBASIC0.51□□□□□ -2.33
LIMK1P53667 RNU6-893P-201ENST00000458841 100 ntBASIC0.51□□□□□ -2.33
LIMK1P53667 RNU6-1023P-201ENST00000516137 106 ntBASIC0.51□□□□□ -2.33
LIMK1P53667 RNU6-111P-201ENST00000517179 105 ntBASIC0.51□□□□□ -2.33
LIMK1P53667 MIR4503-201ENST00000582187 83 ntBASIC0.51□□□□□ -2.33
LIMK1P53667 AC008608.1-201ENST00000603910 127 ntBASIC0.51□□□□□ -2.33
LIMK1P53667 RNU6-403P-201ENST00000363163 104 ntBASIC0.5□□□□□ -2.33
LIMK1P53667 RNU4-16P-201ENST00000364737 141 ntBASIC0.5□□□□□ -2.33
LIMK1P53667 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.5□□□□□ -2.33
LIMK1P53667 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
LIMK1P53667 AC090897.1-201ENST00000580909 226 ntBASIC0.5□□□□□ -2.33
LIMK1P53667 AL662814.1-201ENST00000617364 121 ntBASIC0.5□□□□□ -2.33
LIMK1P53667 U6.106-201ENST00000636360 105 ntBASIC0.5□□□□□ -2.33
LIMK1P53667 Y_RNA.193-201ENST00000363979 102 ntBASIC0.49□□□□□ -2.33
LIMK1P53667 Y_RNA.307-201ENST00000365022 117 ntBASIC0.49□□□□□ -2.33
LIMK1P53667 RNU6-597P-201ENST00000365620 102 ntBASIC0.49□□□□□ -2.33
LIMK1P53667 SNORA50A-201ENST00000384225 134 ntBASIC0.49□□□□□ -2.33
LIMK1P53667 SNORD58.1-201ENST00000391313 66 ntBASIC0.49□□□□□ -2.33
LIMK1P53667 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
LIMK1P53667 Y_RNA.680-201ENST00000516441 93 ntBASIC0.49□□□□□ -2.33
LIMK1P53667 MIR3149-201ENST00000584629 83 ntBASIC0.49□□□□□ -2.33
LIMK1P53667 SNORD92-201ENST00000585078 85 ntBASIC0.49□□□□□ -2.33
LIMK1P53667 Y_RNA.83-201ENST00000363005 113 ntBASIC0.48□□□□□ -2.33
LIMK1P53667 Y_RNA.200-201ENST00000364018 102 ntBASIC0.48□□□□□ -2.33
LIMK1P53667 RNU6-574P-201ENST00000384265 107 ntBASIC0.48□□□□□ -2.33
LIMK1P53667 AC002350.1-201ENST00000490759 375 ntBASIC0.48□□□□□ -2.33
LIMK1P53667 RNU6-448P-201ENST00000517052 107 ntBASIC0.48□□□□□ -2.33
LIMK1P53667 MTND5P32-201ENST00000560711 1802 ntBASIC0.48□□□□□ -2.33
LIMK1P53667 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
LIMK1P53667 Y_RNA.75-201ENST00000362927 97 ntBASIC0.47□□□□□ -2.33
LIMK1P53667 Y_RNA.452-201ENST00000384202 108 ntBASIC0.47□□□□□ -2.33
LIMK1P53667 SNORD100-201ENST00000408573 76 ntBASIC0.47□□□□□ -2.33
LIMK1P53667 RN7SKP12-201ENST00000516275 143 ntBASIC0.47□□□□□ -2.33
LIMK1P53667 MIR4514-201ENST00000581410 57 ntBASIC0.47□□□□□ -2.33
LIMK1P53667 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.47□□□□□ -2.33
LIMK1P53667 AC092634.7-201ENST00000621022 103 ntBASIC0.47□□□□□ -2.33
LIMK1P53667 RNU6-1020P-201ENST00000363684 107 ntBASIC0.46□□□□□ -2.34
LIMK1P53667 SNORA18-201ENST00000384416 132 ntBASIC0.46□□□□□ -2.34
LIMK1P53667 SNORA25.12-201ENST00000516202 82 ntBASIC0.46□□□□□ -2.34
LIMK1P53667 SCARNA15-202ENST00000516881 127 ntBASIC0.46□□□□□ -2.34
LIMK1P53667 AC141846.1-201ENST00000568348 142 ntBASIC0.46□□□□□ -2.34
LIMK1P53667 RNU6-1336P-201ENST00000383886 109 ntBASIC0.45□□□□□ -2.34
LIMK1P53667 SNORA72.6-201ENST00000384520 129 ntBASIC0.45□□□□□ -2.34
LIMK1P53667 RNU5E-9P-201ENST00000411164 104 ntBASIC0.45□□□□□ -2.34
LIMK1P53667 MRPS18CP4-201ENST00000535821 231 ntBASIC0.45□□□□□ -2.34
LIMK1P53667 MIR4431-201ENST00000579990 94 ntBASIC0.45□□□□□ -2.34
LIMK1P53667 MIR411-201ENST00000362239 96 ntBASIC0.44□□□□□ -2.34
LIMK1P53667 RNY1P6-201ENST00000384193 109 ntBASIC0.44□□□□□ -2.34
LIMK1P53667 Y_RNA.489-201ENST00000384410 101 ntBASIC0.44□□□□□ -2.34
LIMK1P53667 U8.15-201ENST00000390947 134 ntBASIC0.44□□□□□ -2.34
LIMK1P53667 RNU6-918P-201ENST00000391219 106 ntBASIC0.44□□□□□ -2.34
LIMK1P53667 RNU6-469P-201ENST00000516253 101 ntBASIC0.44□□□□□ -2.34
LIMK1P53667 AL353621.2-201ENST00000605340 133 ntBASIC0.44□□□□□ -2.34
LIMK1P53667 uc_338.16-201ENST00000621804 95 ntBASIC0.44□□□□□ -2.34
LIMK1P53667 SNORD18A-201ENST00000363753 72 ntBASIC0.43□□□□□ -2.34
LIMK1P53667 RNU6-463P-201ENST00000384340 107 ntBASIC0.43□□□□□ -2.34
LIMK1P53667 SNORD71-201ENST00000411292 86 ntBASIC0.43□□□□□ -2.34
LIMK1P53667 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.43□□□□□ -2.34
LIMK1P53667 AC107027.2-201ENST00000512197 115 ntBASIC0.43□□□□□ -2.34
LIMK1P53667 MIR3678-201ENST00000578455 94 ntBASIC0.43□□□□□ -2.34
LIMK1P53667 MIR6841-201ENST00000637129 72 ntBASIC0.43□□□□□ -2.34
LIMK1P53667 AC099654.10-201ENST00000640395 161 ntBASIC0.43□□□□□ -2.34
LIMK1P53667 Y_RNA.13-201ENST00000362403 112 ntBASIC0.42□□□□□ -2.34
LIMK1P53667 Y_RNA.337-201ENST00000365312 102 ntBASIC0.42□□□□□ -2.34
LIMK1P53667 Y_RNA.357-201ENST00000365487 109 ntBASIC0.42□□□□□ -2.34
LIMK1P53667 AL022718.1-201ENST00000412004 84 ntBASIC0.42□□□□□ -2.34
LIMK1P53667 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.42□□□□□ -2.34
LIMK1P53667 AC067863.3-201ENST00000624172 122 ntBASIC0.42□□□□□ -2.34
LIMK1P53667 RNU6-312P-201ENST00000364629 107 ntBASIC0.41□□□□□ -2.34
LIMK1P53667 RNU6-47P-201ENST00000383866 107 ntBASIC0.41□□□□□ -2.34
LIMK1P53667 RNU6-768P-201ENST00000384683 107 ntBASIC0.41□□□□□ -2.34
LIMK1P53667 MIR329-2-201ENST00000385029 84 ntBASIC0.41□□□□□ -2.34
LIMK1P53667 Y_RNA.617-201ENST00000410920 90 ntBASIC0.41□□□□□ -2.34
LIMK1P53667 RNU6-1086P-201ENST00000410930 100 ntBASIC0.41□□□□□ -2.34
LIMK1P53667 RNU7-113P-201ENST00000459273 62 ntBASIC0.41□□□□□ -2.34
LIMK1P53667 Y_RNA.757-201ENST00000578934 114 ntBASIC0.41□□□□□ -2.34
LIMK1P53667 MIR6844-201ENST00000637122 62 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms