Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.54□□□□□ -2
RFC5P40937 AC012676.2-201ENST00000619258 186 ntBASIC2.54□□□□□ -2
RFC5P40937 MIR6766-201ENST00000622641 72 ntBASIC2.54□□□□□ -2
RFC5P40937 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RFC5P40937 AL596028.1-201ENST00000326971 197 ntBASIC2.53□□□□□ -2
RFC5P40937 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.53□□□□□ -2
RFC5P40937 RPL30P7-201ENST00000479312 323 ntBASIC2.53□□□□□ -2
RFC5P40937 RNA5SP82-201ENST00000516707 92 ntBASIC2.53□□□□□ -2
RFC5P40937 SEPT14P17-201ENST00000617978 177 ntBASIC2.53□□□□□ -2
RFC5P40937 AL359851.1-201ENST00000569460 4997 ntBASIC2.53□□□□□ -2
RFC5P40937 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RFC5P40937 RNU6-1125P-201ENST00000363601 107 ntBASIC2.52□□□□□ -2.01
RFC5P40937 RNU6-573P-201ENST00000383938 106 ntBASIC2.52□□□□□ -2.01
RFC5P40937 RNU6-675P-201ENST00000384236 104 ntBASIC2.52□□□□□ -2.01
RFC5P40937 RNU6-480P-201ENST00000384332 107 ntBASIC2.52□□□□□ -2.01
RFC5P40937 HMGN2P23-201ENST00000456759 269 ntBASIC2.52□□□□□ -2.01
RFC5P40937 RNU7-62P-201ENST00000458856 62 ntBASIC2.52□□□□□ -2.01
RFC5P40937 MIR1273D-201ENST00000577266 86 ntBASIC2.52□□□□□ -2.01
RFC5P40937 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
RFC5P40937 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
RFC5P40937 MIR103A2-201ENST00000362154 78 ntBASIC2.51□□□□□ -2.01
RFC5P40937 Y_RNA.168-201ENST00000363740 102 ntBASIC2.51□□□□□ -2.01
RFC5P40937 Y_RNA.173-201ENST00000363776 113 ntBASIC2.51□□□□□ -2.01
RFC5P40937 SNORA70B-201ENST00000384210 135 ntBASIC2.51□□□□□ -2.01
RFC5P40937 RNU6-242P-201ENST00000384359 107 ntBASIC2.51□□□□□ -2.01
RFC5P40937 RNU6-1165P-201ENST00000410119 107 ntBASIC2.51□□□□□ -2.01
RFC5P40937 RNU6-402P-201ENST00000410678 103 ntBASIC2.51□□□□□ -2.01
RFC5P40937 MIR6740-201ENST00000618268 113 ntBASIC2.51□□□□□ -2.01
RFC5P40937 MIR1245B-201ENST00000636115 69 ntBASIC2.51□□□□□ -2.01
RFC5P40937 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.51□□□□□ -2.01
RFC5P40937 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RFC5P40937 HSBP1P2-201ENST00000299671 229 ntBASIC2.5□□□□□ -2.01
RFC5P40937 MIR302D-201ENST00000362275 68 ntBASIC2.5□□□□□ -2.01
RFC5P40937 Y_RNA.219-201ENST00000364232 113 ntBASIC2.5□□□□□ -2.01
RFC5P40937 SNORD1A-201ENST00000364968 72 ntBASIC2.5□□□□□ -2.01
RFC5P40937 RNU6-205P-201ENST00000390858 107 ntBASIC2.5□□□□□ -2.01
RFC5P40937 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.5□□□□□ -2.01
RFC5P40937 RN7SKP223-201ENST00000410582 62 ntBASIC2.5□□□□□ -2.01
RFC5P40937 RNU6-592P-201ENST00000411333 103 ntBASIC2.5□□□□□ -2.01
RFC5P40937 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.5□□□□□ -2.01
RFC5P40937 RNU1-98P-201ENST00000458992 160 ntBASIC2.5□□□□□ -2.01
RFC5P40937 RNA5SP233-201ENST00000459153 113 ntBASIC2.5□□□□□ -2.01
RFC5P40937 AC022137.1-201ENST00000483735 151 ntBASIC2.5□□□□□ -2.01
RFC5P40937 RPS27P21-201ENST00000486977 252 ntBASIC2.5□□□□□ -2.01
RFC5P40937 MIR4668-201ENST00000582284 70 ntBASIC2.5□□□□□ -2.01
RFC5P40937 AL627230.6-201ENST00000611129 280 ntBASIC2.5□□□□□ -2.01
RFC5P40937 MIR377-201ENST00000362145 69 ntBASIC2.49□□□□□ -2.01
RFC5P40937 RNA5SP264-201ENST00000363115 107 ntBASIC2.49□□□□□ -2.01
RFC5P40937 MT-TF-201ENST00000387314 71 ntBASIC2.49□□□□□ -2.01
RFC5P40937 AC005908.1-201ENST00000468701 347 ntBASIC2.49□□□□□ -2.01
RFC5P40937 AC019176.1-201ENST00000518519 225 ntBASIC2.49□□□□□ -2.01
RFC5P40937 AP003716.2-201ENST00000528260 108 ntBASIC2.49□□□□□ -2.01
RFC5P40937 MIR3937-201ENST00000580135 106 ntBASIC2.49□□□□□ -2.01
RFC5P40937 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.48□□□□□ -2.01
RFC5P40937 U8.2-201ENST00000363156 134 ntBASIC2.48□□□□□ -2.01
RFC5P40937 MIR221-201ENST00000385135 110 ntBASIC2.48□□□□□ -2.01
RFC5P40937 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RFC5P40937 RNU6-613P-201ENST00000410412 108 ntBASIC2.48□□□□□ -2.01
RFC5P40937 snoU13.25-201ENST00000458945 104 ntBASIC2.48□□□□□ -2.01
RFC5P40937 RNU1-41P-201ENST00000516161 162 ntBASIC2.48□□□□□ -2.01
RFC5P40937 RNU1-48P-201ENST00000516400 162 ntBASIC2.48□□□□□ -2.01
RFC5P40937 MIR6873-201ENST00000622788 63 ntBASIC2.48□□□□□ -2.01
RFC5P40937 MIR6516-201ENST00000630554 81 ntBASIC2.48□□□□□ -2.01
RFC5P40937 MIR30D-201ENST00000362283 70 ntBASIC2.47□□□□□ -2.01
RFC5P40937 SNORA67.3-201ENST00000384366 140 ntBASIC2.47□□□□□ -2.01
RFC5P40937 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RFC5P40937 RNA5SP200-201ENST00000516360 103 ntBASIC2.47□□□□□ -2.01
RFC5P40937 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.47□□□□□ -2.01
RFC5P40937 MIR3198-2-201ENST00000577868 80 ntBASIC2.47□□□□□ -2.01
RFC5P40937 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RFC5P40937 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RFC5P40937 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.46□□□□□ -2.02
RFC5P40937 MIR1185-1-201ENST00000408598 86 ntBASIC2.46□□□□□ -2.02
RFC5P40937 Y_RNA.620-201ENST00000411009 88 ntBASIC2.46□□□□□ -2.02
RFC5P40937 AC138749.4-201ENST00000563970 127 ntBASIC2.46□□□□□ -2.02
RFC5P40937 MIR6132-201ENST00000622083 109 ntBASIC2.46□□□□□ -2.02
RFC5P40937 RNU6-219P-201ENST00000364728 107 ntBASIC2.45□□□□□ -2.02
RFC5P40937 RNY1P4-201ENST00000384595 115 ntBASIC2.45□□□□□ -2.02
RFC5P40937 MIR144-201ENST00000384886 86 ntBASIC2.45□□□□□ -2.02
RFC5P40937 MIR4648-201ENST00000580107 72 ntBASIC2.45□□□□□ -2.02
RFC5P40937 AC090897.1-201ENST00000580909 226 ntBASIC2.45□□□□□ -2.02
RFC5P40937 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.45□□□□□ -2.02
RFC5P40937 U6.109-201ENST00000636749 87 ntBASIC2.45□□□□□ -2.02
RFC5P40937 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.45□□□□□ -2.02
RFC5P40937 HMGN2P19-201ENST00000425149 265 ntBASIC2.44□□□□□ -2.02
RFC5P40937 MIR4500-201ENST00000579472 76 ntBASIC2.44□□□□□ -2.02
RFC5P40937 MIR6895-201ENST00000613497 78 ntBASIC2.44□□□□□ -2.02
RFC5P40937 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RFC5P40937 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RFC5P40937 SNORA2B-201ENST00000384583 137 ntBASIC2.43□□□□□ -2.02
RFC5P40937 MIR181B2-201ENST00000385004 89 ntBASIC2.43□□□□□ -2.02
RFC5P40937 SNORA48.3-201ENST00000391081 134 ntBASIC2.43□□□□□ -2.02
RFC5P40937 Y_RNA.685-201ENST00000516532 108 ntBASIC2.43□□□□□ -2.02
RFC5P40937 AC121758.2-201ENST00000553271 193 ntBASIC2.43□□□□□ -2.02
RFC5P40937 MIR3664-201ENST00000579074 99 ntBASIC2.43□□□□□ -2.02
RFC5P40937 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.43□□□□□ -2.02
RFC5P40937 MIR3202-2-201ENST00000635980 79 ntBASIC2.43□□□□□ -2.02
RFC5P40937 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
RFC5P40937 Y_RNA.73-201ENST00000362910 113 ntBASIC2.42□□□□□ -2.02
RFC5P40937 RNA5SP133-201ENST00000363368 119 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 209.6 ms