Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 MIR1270-201ENST00000459320 83 ntBASIC1.23□□□□□ -2.21
CIITAP33076 RN7SKP179-201ENST00000516126 217 ntBASIC1.23□□□□□ -2.21
CIITAP33076 SNORA70.22-201ENST00000517160 124 ntBASIC1.23□□□□□ -2.21
CIITAP33076 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.23□□□□□ -2.21
CIITAP33076 SNORD38B-202ENST00000625943 69 ntBASIC1.23□□□□□ -2.21
CIITAP33076 Y_RNA.36-201ENST00000362602 112 ntBASIC1.22□□□□□ -2.21
CIITAP33076 RNU6-396P-201ENST00000365369 105 ntBASIC1.22□□□□□ -2.21
CIITAP33076 Y_RNA.531-201ENST00000384589 121 ntBASIC1.22□□□□□ -2.21
CIITAP33076 SNORA22C-201ENST00000384614 134 ntBASIC1.22□□□□□ -2.21
CIITAP33076 Y_RNA.563-201ENST00000384707 108 ntBASIC1.22□□□□□ -2.21
CIITAP33076 MIR222-201ENST00000384992 110 ntBASIC1.22□□□□□ -2.21
CIITAP33076 MT-TN-201ENST00000387400 73 ntBASIC1.22□□□□□ -2.21
CIITAP33076 RNU6-910P-201ENST00000390844 107 ntBASIC1.22□□□□□ -2.21
CIITAP33076 SNORD12-201ENST00000391002 90 ntBASIC1.22□□□□□ -2.21
CIITAP33076 MIR1263-201ENST00000408324 86 ntBASIC1.22□□□□□ -2.21
CIITAP33076 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.22□□□□□ -2.21
CIITAP33076 SNORD79.1-201ENST00000516069 84 ntBASIC1.22□□□□□ -2.21
CIITAP33076 RNU6-1061P-201ENST00000516530 99 ntBASIC1.22□□□□□ -2.21
CIITAP33076 MIR4295-201ENST00000585286 85 ntBASIC1.22□□□□□ -2.21
CIITAP33076 uc_338.6-201ENST00000613544 171 ntBASIC1.22□□□□□ -2.21
CIITAP33076 SEPT14P17-201ENST00000617978 177 ntBASIC1.22□□□□□ -2.21
CIITAP33076 MIR6515-201ENST00000619843 57 ntBASIC1.22□□□□□ -2.21
CIITAP33076 RNU6-580P-201ENST00000365159 107 ntBASIC1.21□□□□□ -2.22
CIITAP33076 SNORD114-22-201ENST00000365423 72 ntBASIC1.21□□□□□ -2.22
CIITAP33076 RNU6-735P-201ENST00000410612 107 ntBASIC1.21□□□□□ -2.22
CIITAP33076 AL022718.1-201ENST00000412004 84 ntBASIC1.21□□□□□ -2.22
CIITAP33076 AC008267.6-201ENST00000441664 139 ntBASIC1.21□□□□□ -2.22
CIITAP33076 RNU7-21P-201ENST00000459430 62 ntBASIC1.21□□□□□ -2.22
CIITAP33076 AC113410.1-201ENST00000505029 247 ntBASIC1.21□□□□□ -2.22
CIITAP33076 MIR2115-201ENST00000516657 100 ntBASIC1.21□□□□□ -2.22
CIITAP33076 MIR6740-201ENST00000618268 113 ntBASIC1.21□□□□□ -2.22
CIITAP33076 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CIITAP33076 RNA5SP205-201ENST00000364653 136 ntBASIC1.2□□□□□ -2.22
CIITAP33076 RNU6-342P-201ENST00000384521 104 ntBASIC1.2□□□□□ -2.22
CIITAP33076 Y_RNA.528-201ENST00000384575 108 ntBASIC1.2□□□□□ -2.22
CIITAP33076 MIR563-201ENST00000385080 79 ntBASIC1.2□□□□□ -2.22
CIITAP33076 RNU6-205P-201ENST00000390858 107 ntBASIC1.2□□□□□ -2.22
CIITAP33076 RNU6-479P-201ENST00000516348 105 ntBASIC1.2□□□□□ -2.22
CIITAP33076 AC025166.1-201ENST00000612411 163 ntBASIC1.2□□□□□ -2.22
CIITAP33076 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
CIITAP33076 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
CIITAP33076 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CIITAP33076 MTND5P18-201ENST00000445624 1801 ntBASIC1.19□□□□□ -2.22
CIITAP33076 RNU1-124P-201ENST00000363861 145 ntBASIC1.19□□□□□ -2.22
CIITAP33076 Y_RNA.353-201ENST00000365440 108 ntBASIC1.19□□□□□ -2.22
CIITAP33076 MIR548I2-201ENST00000408348 149 ntBASIC1.19□□□□□ -2.22
CIITAP33076 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
CIITAP33076 RNA5SP136-201ENST00000410906 107 ntBASIC1.19□□□□□ -2.22
CIITAP33076 RNU6-893P-201ENST00000458841 100 ntBASIC1.19□□□□□ -2.22
CIITAP33076 snoU13.2-201ENST00000459201 104 ntBASIC1.19□□□□□ -2.22
CIITAP33076 RNU7-113P-201ENST00000459273 62 ntBASIC1.19□□□□□ -2.22
CIITAP33076 AC087343.1-201ENST00000477341 475 ntBASIC1.19□□□□□ -2.22
CIITAP33076 COX6CP6-201ENST00000490840 228 ntBASIC1.19□□□□□ -2.22
CIITAP33076 AC036111.3-201ENST00000526389 112 ntBASIC1.19□□□□□ -2.22
CIITAP33076 MIR4264-201ENST00000583520 66 ntBASIC1.19□□□□□ -2.22
CIITAP33076 SNORD114-21-201ENST00000606412 72 ntBASIC1.19□□□□□ -2.22
CIITAP33076 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.18□□□□□ -2.22
CIITAP33076 MIR377-201ENST00000362145 69 ntBASIC1.18□□□□□ -2.22
CIITAP33076 Y_RNA.198-201ENST00000364013 98 ntBASIC1.18□□□□□ -2.22
CIITAP33076 Y_RNA.354-201ENST00000365448 111 ntBASIC1.18□□□□□ -2.22
CIITAP33076 RNU2-51P-201ENST00000410708 197 ntBASIC1.18□□□□□ -2.22
CIITAP33076 RPS29P28-201ENST00000446439 141 ntBASIC1.18□□□□□ -2.22
CIITAP33076 RPS23P4-201ENST00000487908 423 ntBASIC1.18□□□□□ -2.22
CIITAP33076 RNU6-62P-201ENST00000516526 102 ntBASIC1.18□□□□□ -2.22
CIITAP33076 RNA5SP404-201ENST00000517118 132 ntBASIC1.18□□□□□ -2.22
CIITAP33076 MIR548AE2-201ENST00000583456 67 ntBASIC1.18□□□□□ -2.22
CIITAP33076 AC012676.2-201ENST00000619258 186 ntBASIC1.18□□□□□ -2.22
CIITAP33076 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
CIITAP33076 SNORA80D-201ENST00000384488 135 ntBASIC1.17□□□□□ -2.22
CIITAP33076 RNU6-1154P-201ENST00000391001 104 ntBASIC1.17□□□□□ -2.22
CIITAP33076 snoU13.21-201ENST00000459368 105 ntBASIC1.17□□□□□ -2.22
CIITAP33076 OR2A41P-201ENST00000473586 105 ntBASIC1.17□□□□□ -2.22
CIITAP33076 SNORD33.1-201ENST00000516213 88 ntBASIC1.17□□□□□ -2.22
CIITAP33076 RNU6-1223P-201ENST00000517124 104 ntBASIC1.17□□□□□ -2.22
CIITAP33076 MIR30D-201ENST00000362283 70 ntBASIC1.16□□□□□ -2.22
CIITAP33076 Y_RNA.168-201ENST00000363740 102 ntBASIC1.16□□□□□ -2.22
CIITAP33076 Y_RNA.330-201ENST00000365230 109 ntBASIC1.16□□□□□ -2.22
CIITAP33076 SNORA18-201ENST00000384416 132 ntBASIC1.16□□□□□ -2.22
CIITAP33076 MIR598-201ENST00000384868 97 ntBASIC1.16□□□□□ -2.22
CIITAP33076 MIR588-201ENST00000384900 83 ntBASIC1.16□□□□□ -2.22
CIITAP33076 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.16□□□□□ -2.22
CIITAP33076 MRPL35P3-201ENST00000421557 364 ntBASIC1.16□□□□□ -2.22
CIITAP33076 AC002429.1-201ENST00000437672 148 ntBASIC1.16□□□□□ -2.22
CIITAP33076 RNA5SP33-201ENST00000516687 98 ntBASIC1.16□□□□□ -2.22
CIITAP33076 RNU7-35P-201ENST00000517174 62 ntBASIC1.16□□□□□ -2.22
CIITAP33076 AC022709.1-201ENST00000615967 87 ntBASIC1.16□□□□□ -2.22
CIITAP33076 AC087741.2-201ENST00000619415 172 ntBASIC1.16□□□□□ -2.22
CIITAP33076 MIR96-201ENST00000362288 78 ntBASIC1.15□□□□□ -2.23
CIITAP33076 RNU4-38P-201ENST00000364472 129 ntBASIC1.15□□□□□ -2.23
CIITAP33076 RNU6-1237P-201ENST00000384777 107 ntBASIC1.15□□□□□ -2.23
CIITAP33076 RNU6-313P-201ENST00000516317 112 ntBASIC1.15□□□□□ -2.23
CIITAP33076 AP000753.3-201ENST00000604083 169 ntBASIC1.15□□□□□ -2.23
CIITAP33076 AC008163.1-202ENST00000636004 2889 ntBASIC1.15□□□□□ -2.23
CIITAP33076 AL391516.1-201ENST00000554380 2449 ntBASIC1.14□□□□□ -2.23
CIITAP33076 SNORD113.3-201ENST00000364630 78 ntBASIC1.14□□□□□ -2.23
CIITAP33076 Y_RNA.346-201ENST00000365385 112 ntBASIC1.14□□□□□ -2.23
CIITAP33076 MIR19B1-201ENST00000384829 87 ntBASIC1.14□□□□□ -2.23
CIITAP33076 RNU4-69P-201ENST00000410677 143 ntBASIC1.14□□□□□ -2.23
CIITAP33076 RNU7-62P-201ENST00000458856 62 ntBASIC1.14□□□□□ -2.23
CIITAP33076 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 207.3 ms