Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RNU7-70P-201ENST00000516941 66 ntBASIC-1.37□□□□□ -2.63
APOEP02649 RNU6-699P-201ENST00000517081 110 ntBASIC-1.37□□□□□ -2.63
APOEP02649 AL359881.1-201ENST00000602916 267 ntBASIC-1.37□□□□□ -2.63
APOEP02649 AC097639.2-201ENST00000603159 172 ntBASIC-1.37□□□□□ -2.63
APOEP02649 AC069503.3-201ENST00000618674 145 ntBASIC-1.37□□□□□ -2.63
APOEP02649 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.38□□□□□ -2.63
APOEP02649 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.38□□□□□ -2.63
APOEP02649 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.38□□□□□ -2.63
APOEP02649 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.38□□□□□ -2.63
APOEP02649 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.38□□□□□ -2.63
APOEP02649 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.38□□□□□ -2.63
APOEP02649 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.38□□□□□ -2.63
APOEP02649 RNU2-55P-201ENST00000411146 174 ntBASIC-1.38□□□□□ -2.63
APOEP02649 AC024909.2-201ENST00000553035 286 ntBASIC-1.38□□□□□ -2.63
APOEP02649 MTND5P40-201ENST00000559945 246 ntBASIC-1.38□□□□□ -2.63
APOEP02649 MIR5690-201ENST00000583739 73 ntBASIC-1.38□□□□□ -2.63
APOEP02649 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.38□□□□□ -2.63
APOEP02649 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.38□□□□□ -2.63
APOEP02649 SNORD56B-201ENST00000384713 71 ntBASIC-1.39□□□□□ -2.63
APOEP02649 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.39□□□□□ -2.63
APOEP02649 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.39□□□□□ -2.63
APOEP02649 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.39□□□□□ -2.63
APOEP02649 RNU7-30P-201ENST00000516835 62 ntBASIC-1.39□□□□□ -2.63
APOEP02649 RPS29P30-201ENST00000600975 111 ntBASIC-1.39□□□□□ -2.63
APOEP02649 AC006006.1-201ENST00000603082 144 ntBASIC-1.39□□□□□ -2.63
APOEP02649 RNU6-154P-201ENST00000384306 106 ntBASIC-1.4□□□□□ -2.63
APOEP02649 RNU6-901P-201ENST00000384593 106 ntBASIC-1.4□□□□□ -2.63
APOEP02649 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.4□□□□□ -2.63
APOEP02649 SNRPGP8-201ENST00000454064 226 ntBASIC-1.4□□□□□ -2.63
APOEP02649 AC040926.1-201ENST00000530195 238 ntBASIC-1.4□□□□□ -2.63
APOEP02649 SNORD114-25-201ENST00000363742 72 ntBASIC-1.41□□□□□ -2.64
APOEP02649 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.41□□□□□ -2.64
APOEP02649 AL500527.2-201ENST00000454105 95 ntBASIC-1.41□□□□□ -2.64
APOEP02649 U8.20-201ENST00000459445 131 ntBASIC-1.41□□□□□ -2.64
APOEP02649 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.41□□□□□ -2.64
APOEP02649 MIR4280-201ENST00000582178 76 ntBASIC-1.41□□□□□ -2.64
APOEP02649 AC006504.6-201ENST00000590142 199 ntBASIC-1.41□□□□□ -2.64
APOEP02649 AC133104.2-201ENST00000615272 193 ntBASIC-1.41□□□□□ -2.64
APOEP02649 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.42□□□□□ -2.64
APOEP02649 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.42□□□□□ -2.64
APOEP02649 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.42□□□□□ -2.64
APOEP02649 SNORD38.3-201ENST00000516599 73 ntBASIC-1.42□□□□□ -2.64
APOEP02649 AP000676.1-201ENST00000533307 52 ntBASIC-1.42□□□□□ -2.64
APOEP02649 MIR4500-201ENST00000579472 76 ntBASIC-1.42□□□□□ -2.64
APOEP02649 MIR548AG2-201ENST00000581228 64 ntBASIC-1.42□□□□□ -2.64
APOEP02649 AC103591.3-201ENST00000608684 209 ntBASIC-1.42□□□□□ -2.64
APOEP02649 uc_338.19-201ENST00000616808 99 ntBASIC-1.42□□□□□ -2.64
APOEP02649 MIR3688-2-201ENST00000636963 87 ntBASIC-1.42□□□□□ -2.64
APOEP02649 RNU6-102P-201ENST00000384485 104 ntBASIC-1.43□□□□□ -2.64
APOEP02649 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.43□□□□□ -2.64
APOEP02649 MIR519E-201ENST00000385075 84 ntBASIC-1.43□□□□□ -2.64
APOEP02649 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.43□□□□□ -2.64
APOEP02649 AC093423.1-201ENST00000440817 142 ntBASIC-1.43□□□□□ -2.64
APOEP02649 RNU7-195P-201ENST00000458793 62 ntBASIC-1.43□□□□□ -2.64
APOEP02649 RNA5SP33-201ENST00000516687 98 ntBASIC-1.43□□□□□ -2.64
APOEP02649 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.43□□□□□ -2.64
APOEP02649 MIR5688-201ENST00000580619 83 ntBASIC-1.43□□□□□ -2.64
APOEP02649 RNU6-86P-201ENST00000606534 107 ntBASIC-1.43□□□□□ -2.64
APOEP02649 SNORD114-10-201ENST00000363409 72 ntBASIC-1.44□□□□□ -2.64
APOEP02649 SNORD113-8-201ENST00000363497 74 ntBASIC-1.44□□□□□ -2.64
APOEP02649 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.44□□□□□ -2.64
APOEP02649 RNU6-900P-201ENST00000384498 102 ntBASIC-1.44□□□□□ -2.64
APOEP02649 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.44□□□□□ -2.64
APOEP02649 RNU6-130P-201ENST00000411112 103 ntBASIC-1.44□□□□□ -2.64
APOEP02649 SNORA13-201ENST00000458790 133 ntBASIC-1.44□□□□□ -2.64
APOEP02649 snoU13.11-201ENST00000459219 104 ntBASIC-1.44□□□□□ -2.64
APOEP02649 RNU7-113P-201ENST00000459273 62 ntBASIC-1.44□□□□□ -2.64
APOEP02649 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.44□□□□□ -2.64
APOEP02649 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.44□□□□□ -2.64
APOEP02649 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.44□□□□□ -2.64
APOEP02649 MIR4499-201ENST00000584834 69 ntBASIC-1.44□□□□□ -2.64
APOEP02649 MT-TT-201ENST00000387460 66 ntBASIC-1.45□□□□□ -2.64
APOEP02649 HSPE1P25-201ENST00000455484 251 ntBASIC-1.45□□□□□ -2.64
APOEP02649 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.45□□□□□ -2.64
APOEP02649 RNU6-274P-201ENST00000459566 107 ntBASIC-1.45□□□□□ -2.64
APOEP02649 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.45□□□□□ -2.64
APOEP02649 RNU6-358P-201ENST00000516564 75 ntBASIC-1.45□□□□□ -2.64
APOEP02649 AL008718.3-201ENST00000610217 321 ntBASIC-1.45□□□□□ -2.64
APOEP02649 PART1_1.1-201ENST00000611761 217 ntBASIC-1.45□□□□□ -2.64
APOEP02649 RNU6-524P-201ENST00000384270 107 ntBASIC-1.46□□□□□ -2.64
APOEP02649 MTND1P29-201ENST00000448112 647 ntBASIC-1.46□□□□□ -2.64
APOEP02649 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.46□□□□□ -2.64
APOEP02649 MIR6851-201ENST00000617060 67 ntBASIC-1.46□□□□□ -2.64
APOEP02649 RNU6-662P-201ENST00000384253 104 ntBASIC-1.47□□□□□ -2.64
APOEP02649 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.47□□□□□ -2.64
APOEP02649 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.47□□□□□ -2.64
APOEP02649 RNA5SP144-201ENST00000410846 116 ntBASIC-1.47□□□□□ -2.64
APOEP02649 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.47□□□□□ -2.64
APOEP02649 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.47□□□□□ -2.64
APOEP02649 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.47□□□□□ -2.64
APOEP02649 MIR4460-201ENST00000577862 86 ntBASIC-1.47□□□□□ -2.64
APOEP02649 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.48□□□□□ -2.65
APOEP02649 SNORD116-1-201ENST00000384335 95 ntBASIC-1.48□□□□□ -2.65
APOEP02649 MIR617-201ENST00000385030 97 ntBASIC-1.48□□□□□ -2.65
APOEP02649 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.48□□□□□ -2.65
APOEP02649 RNU6-502P-201ENST00000362419 108 ntBASIC-1.49□□□□□ -2.65
APOEP02649 SNORD115-2-201ENST00000362842 82 ntBASIC-1.49□□□□□ -2.65
APOEP02649 SNORD115-20-201ENST00000365099 82 ntBASIC-1.49□□□□□ -2.65
APOEP02649 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.49□□□□□ -2.65
APOEP02649 MIR519A1-201ENST00000385257 85 ntBASIC-1.49□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 355.2 ms