Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MIR6841-201ENST00000637129 72 ntBASIC1.43□□□□□ -2.18
SLC28A2O43868 SNORD115-2-201ENST00000362842 82 ntBASIC1.42□□□□□ -2.18
SLC28A2O43868 SNORD1A-201ENST00000364968 72 ntBASIC1.42□□□□□ -2.18
SLC28A2O43868 SNORD115-20-201ENST00000365099 82 ntBASIC1.42□□□□□ -2.18
SLC28A2O43868 Y_RNA.470-201ENST00000384307 117 ntBASIC1.42□□□□□ -2.18
SLC28A2O43868 Y_RNA.537-201ENST00000384626 109 ntBASIC1.42□□□□□ -2.18
SLC28A2O43868 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.42□□□□□ -2.18
SLC28A2O43868 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.42□□□□□ -2.18
SLC28A2O43868 snoU13.9-201ENST00000458927 103 ntBASIC1.42□□□□□ -2.18
SLC28A2O43868 RNU6-537P-201ENST00000517277 103 ntBASIC1.42□□□□□ -2.18
SLC28A2O43868 MIR3152-201ENST00000579801 74 ntBASIC1.42□□□□□ -2.18
SLC28A2O43868 MIR151B-201ENST00000584249 96 ntBASIC1.42□□□□□ -2.18
SLC28A2O43868 Y_RNA.773-201ENST00000607168 90 ntBASIC1.42□□□□□ -2.18
SLC28A2O43868 MIR8055-201ENST00000610739 97 ntBASIC1.42□□□□□ -2.18
SLC28A2O43868 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.42□□□□□ -2.18
SLC28A2O43868 Y_RNA.30-201ENST00000362572 97 ntBASIC1.41□□□□□ -2.18
SLC28A2O43868 SNORA22.1-201ENST00000362701 134 ntBASIC1.41□□□□□ -2.18
SLC28A2O43868 Y_RNA.348-201ENST00000365403 103 ntBASIC1.41□□□□□ -2.18
SLC28A2O43868 Y_RNA.430-201ENST00000384081 110 ntBASIC1.41□□□□□ -2.18
SLC28A2O43868 RNU6-905P-201ENST00000384434 107 ntBASIC1.41□□□□□ -2.18
SLC28A2O43868 MIR520E-201ENST00000384867 87 ntBASIC1.41□□□□□ -2.18
SLC28A2O43868 MIR653-201ENST00000385279 96 ntBASIC1.41□□□□□ -2.18
SLC28A2O43868 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
SLC28A2O43868 HMGN1P33-201ENST00000432945 451 ntBASIC1.41□□□□□ -2.18
SLC28A2O43868 RNU7-113P-201ENST00000459273 62 ntBASIC1.41□□□□□ -2.18
SLC28A2O43868 AC113410.1-201ENST00000505029 247 ntBASIC1.41□□□□□ -2.18
SLC28A2O43868 Y_RNA.677-201ENST00000516401 85 ntBASIC1.41□□□□□ -2.18
SLC28A2O43868 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.41□□□□□ -2.18
SLC28A2O43868 AL513534.2-201ENST00000603836 250 ntBASIC1.41□□□□□ -2.18
SLC28A2O43868 AP001318.4-201ENST00000616637 121 ntBASIC1.41□□□□□ -2.18
SLC28A2O43868 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
SLC28A2O43868 AL162726.3-218ENST00000636401 95 ntBASIC1.41□□□□□ -2.18
SLC28A2O43868 SNORA51.10-201ENST00000384418 136 ntBASIC1.4□□□□□ -2.19
SLC28A2O43868 RNU1-78P-201ENST00000391248 165 ntBASIC1.4□□□□□ -2.19
SLC28A2O43868 SNORA19.1-201ENST00000410656 129 ntBASIC1.4□□□□□ -2.19
SLC28A2O43868 RNU4-69P-201ENST00000410677 143 ntBASIC1.4□□□□□ -2.19
SLC28A2O43868 RNU6-893P-201ENST00000458841 100 ntBASIC1.4□□□□□ -2.19
SLC28A2O43868 MIR1270-201ENST00000459320 83 ntBASIC1.4□□□□□ -2.19
SLC28A2O43868 RNU7-43P-201ENST00000516554 64 ntBASIC1.4□□□□□ -2.19
SLC28A2O43868 Y_RNA.694-201ENST00000516677 117 ntBASIC1.4□□□□□ -2.19
SLC28A2O43868 MIR4764-201ENST00000580680 88 ntBASIC1.4□□□□□ -2.19
SLC28A2O43868 MIR4422-201ENST00000581938 83 ntBASIC1.4□□□□□ -2.19
SLC28A2O43868 MIR1255B1-201ENST00000636325 63 ntBASIC1.4□□□□□ -2.19
SLC28A2O43868 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SLC28A2O43868 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
SLC28A2O43868 SNORD115-19-201ENST00000363098 82 ntBASIC1.39□□□□□ -2.19
SLC28A2O43868 SNORD115-18-201ENST00000363293 82 ntBASIC1.39□□□□□ -2.19
SLC28A2O43868 SNORD115-17-201ENST00000364612 82 ntBASIC1.39□□□□□ -2.19
SLC28A2O43868 RNU6-1067P-201ENST00000384752 107 ntBASIC1.39□□□□□ -2.19
SLC28A2O43868 MIR590-201ENST00000385008 97 ntBASIC1.39□□□□□ -2.19
SLC28A2O43868 MIR513A1-201ENST00000385138 129 ntBASIC1.39□□□□□ -2.19
SLC28A2O43868 RNU6-816P-201ENST00000390914 107 ntBASIC1.39□□□□□ -2.19
SLC28A2O43868 RNU6-1268P-201ENST00000391214 107 ntBASIC1.39□□□□□ -2.19
SLC28A2O43868 RNU6-1239P-201ENST00000391310 107 ntBASIC1.39□□□□□ -2.19
SLC28A2O43868 MIR1323-201ENST00000408090 73 ntBASIC1.39□□□□□ -2.19
SLC28A2O43868 snoU13.16-201ENST00000459350 104 ntBASIC1.39□□□□□ -2.19
SLC28A2O43868 RNU6-109P-201ENST00000516364 107 ntBASIC1.39□□□□□ -2.19
SLC28A2O43868 RNU6-184P-201ENST00000516514 107 ntBASIC1.39□□□□□ -2.19
SLC28A2O43868 RNA5SP33-201ENST00000516687 98 ntBASIC1.39□□□□□ -2.19
SLC28A2O43868 MIR5582-201ENST00000579697 68 ntBASIC1.39□□□□□ -2.19
SLC28A2O43868 MIR548AE2-201ENST00000583456 67 ntBASIC1.39□□□□□ -2.19
SLC28A2O43868 MIR6788-201ENST00000618842 66 ntBASIC1.39□□□□□ -2.19
SLC28A2O43868 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SLC28A2O43868 RNU6-640P-201ENST00000363693 105 ntBASIC1.38□□□□□ -2.19
SLC28A2O43868 RNU1-93P-201ENST00000364704 169 ntBASIC1.38□□□□□ -2.19
SLC28A2O43868 Y_RNA.299-201ENST00000364973 94 ntBASIC1.38□□□□□ -2.19
SLC28A2O43868 RNU6-1113P-201ENST00000384348 107 ntBASIC1.38□□□□□ -2.19
SLC28A2O43868 MIR520C-201ENST00000385005 87 ntBASIC1.38□□□□□ -2.19
SLC28A2O43868 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.38□□□□□ -2.19
SLC28A2O43868 RNA5SP261-201ENST00000410536 106 ntBASIC1.38□□□□□ -2.19
SLC28A2O43868 AC027119.1-201ENST00000440877 241 ntBASIC1.38□□□□□ -2.19
SLC28A2O43868 RPL39P25-201ENST00000449384 154 ntBASIC1.38□□□□□ -2.19
SLC28A2O43868 HSPE1P24-201ENST00000450782 238 ntBASIC1.38□□□□□ -2.19
SLC28A2O43868 AC008133.2-201ENST00000624540 351 ntBASIC1.38□□□□□ -2.19
SLC28A2O43868 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.38□□□□□ -2.19
SLC28A2O43868 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
SLC28A2O43868 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SLC28A2O43868 RNU6-363P-201ENST00000362895 105 ntBASIC1.37□□□□□ -2.19
SLC28A2O43868 Y_RNA.78-201ENST00000362970 110 ntBASIC1.37□□□□□ -2.19
SLC28A2O43868 RNY4P30-201ENST00000410216 95 ntBASIC1.37□□□□□ -2.19
SLC28A2O43868 MIR1912-201ENST00000410389 80 ntBASIC1.37□□□□□ -2.19
SLC28A2O43868 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.37□□□□□ -2.19
SLC28A2O43868 RPS3AP1-201ENST00000413190 320 ntBASIC1.37□□□□□ -2.19
SLC28A2O43868 AL354695.1-201ENST00000427935 228 ntBASIC1.37□□□□□ -2.19
SLC28A2O43868 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.37□□□□□ -2.19
SLC28A2O43868 MIR4679-1-201ENST00000637619 75 ntBASIC1.37□□□□□ -2.19
SLC28A2O43868 SNORD114-27-201ENST00000363766 70 ntBASIC1.36□□□□□ -2.19
SLC28A2O43868 RNA5SP259-201ENST00000365541 109 ntBASIC1.36□□□□□ -2.19
SLC28A2O43868 RNU6-616P-201ENST00000384353 107 ntBASIC1.36□□□□□ -2.19
SLC28A2O43868 AC090844.1-201ENST00000422019 156 ntBASIC1.36□□□□□ -2.19
SLC28A2O43868 RNU7-41P-201ENST00000515917 61 ntBASIC1.36□□□□□ -2.19
SLC28A2O43868 RNU6-904P-201ENST00000516206 101 ntBASIC1.36□□□□□ -2.19
SLC28A2O43868 AC141557.1-201ENST00000540982 400 ntBASIC1.36□□□□□ -2.19
SLC28A2O43868 MIR548AO-201ENST00000579992 96 ntBASIC1.36□□□□□ -2.19
SLC28A2O43868 MIR8063-201ENST00000621930 81 ntBASIC1.36□□□□□ -2.19
SLC28A2O43868 Z97988.1-201ENST00000637697 135 ntBASIC1.36□□□□□ -2.19
SLC28A2O43868 AL161722.3-201ENST00000605789 2983 ntBASIC1.36□□□□□ -2.19
SLC28A2O43868 RNU6-1099P-201ENST00000363533 107 ntBASIC1.35□□□□□ -2.19
SLC28A2O43868 SNORA1.1-201ENST00000364671 133 ntBASIC1.35□□□□□ -2.19
SLC28A2O43868 MIR605-201ENST00000385078 83 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms