Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H2afb3S4R1G7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.42□□□□□ -0.1
H2afb3S4R1G7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Gm18959-201ENSMUST00000208954 655 ntBASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Gm10566-201ENSMUST00000086739 996 ntBASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H2afb3S4R1G7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.41□□□□□ -0.1
H2afb3S4R1G7 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H2afb3S4R1G7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Gm45058-201ENSMUST00000205810 766 ntBASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H2afb3S4R1G7 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
H2afb3S4R1G7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
H2afb3S4R1G7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms