Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
H2afb1S4R1E0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
H2afb1S4R1E0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afb1S4R1E0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
H2afb1S4R1E0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb1S4R1E0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb1S4R1E0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
H2afb1S4R1E0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb1S4R1E0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
H2afb1S4R1E0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb1S4R1E0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb1S4R1E0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb1S4R1E0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb1S4R1E0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
H2afb1S4R1E0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
H2afb1S4R1E0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb1S4R1E0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.52□□□□□ -0.09
H2afb1S4R1E0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb1S4R1E0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.52□□□□□ -0.09
H2afb1S4R1E0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.52□□□□□ -0.09
H2afb1S4R1E0 Gm44450-201ENSMUST00000199528 114 ntBASIC14.52□□□□□ -0.09
H2afb1S4R1E0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.52□□□□□ -0.09
H2afb1S4R1E0 Gm7213-201ENSMUST00000215977 950 ntBASIC14.52□□□□□ -0.09
H2afb1S4R1E0 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.52□□□□□ -0.09
H2afb1S4R1E0 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.52□□□□□ -0.09
H2afb1S4R1E0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb1S4R1E0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
H2afb1S4R1E0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
H2afb1S4R1E0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb1S4R1E0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb1S4R1E0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb1S4R1E0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
H2afb1S4R1E0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb1S4R1E0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H2afb1S4R1E0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb1S4R1E0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb1S4R1E0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb1S4R1E0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
H2afb1S4R1E0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb1S4R1E0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb1S4R1E0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb1S4R1E0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb1S4R1E0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb1S4R1E0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb1S4R1E0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb1S4R1E0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
H2afb1S4R1E0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms