Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Upk1bQ9Z2C6 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk1bQ9Z2C6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk1bQ9Z2C6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk1bQ9Z2C6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Upk1bQ9Z2C6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Upk1bQ9Z2C6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk1bQ9Z2C6 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.88□□□□□ -0.03
Upk1bQ9Z2C6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Upk1bQ9Z2C6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk1bQ9Z2C6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Sybu-209ENSMUST00000228639 4113 ntBASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Gm12527-201ENSMUST00000117967 564 ntBASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk1bQ9Z2C6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Upk1bQ9Z2C6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Upk1bQ9Z2C6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1bQ9Z2C6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1bQ9Z2C6 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1bQ9Z2C6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1bQ9Z2C6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1bQ9Z2C6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1bQ9Z2C6 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Upk1bQ9Z2C6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Upk1bQ9Z2C6 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1bQ9Z2C6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Upk1bQ9Z2C6 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms