Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmg20bQ9Z104 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Hmg20bQ9Z104 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.88■□□□□ 0.61
Hmg20bQ9Z104 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.88■□□□□ 0.61
Hmg20bQ9Z104 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmg20bQ9Z104 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmg20bQ9Z104 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Hmg20bQ9Z104 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Hmg20bQ9Z104 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmg20bQ9Z104 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmg20bQ9Z104 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmg20bQ9Z104 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmg20bQ9Z104 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 Gm6257-201ENSMUST00000163864 910 ntBASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hmg20bQ9Z104 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmg20bQ9Z104 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Hmg20bQ9Z104 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmg20bQ9Z104 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmg20bQ9Z104 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmg20bQ9Z104 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.86■□□□□ 0.61
Hmg20bQ9Z104 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmg20bQ9Z104 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.86■□□□□ 0.61
Hmg20bQ9Z104 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hmg20bQ9Z104 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmg20bQ9Z104 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmg20bQ9Z104 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmg20bQ9Z104 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.86■□□□□ 0.61
Hmg20bQ9Z104 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmg20bQ9Z104 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Hmg20bQ9Z104 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 Gm7284-201ENSMUST00000131667 944 ntBASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 Gm25406-201ENSMUST00000157599 105 ntBASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmg20bQ9Z104 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmg20bQ9Z104 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hmg20bQ9Z104 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hmg20bQ9Z104 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms