Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.55■□□□□ 0.24
Smarcb1Q9Z0H3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcb1Q9Z0H3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcb1Q9Z0H3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.55■□□□□ 0.24
Smarcb1Q9Z0H3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcb1Q9Z0H3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcb1Q9Z0H3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.55■□□□□ 0.24
Smarcb1Q9Z0H3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcb1Q9Z0H3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.55■□□□□ 0.24
Smarcb1Q9Z0H3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcb1Q9Z0H3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.55■□□□□ 0.24
Smarcb1Q9Z0H3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcb1Q9Z0H3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcb1Q9Z0H3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Smarcb1Q9Z0H3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Smarcb1Q9Z0H3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcb1Q9Z0H3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcb1Q9Z0H3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcb1Q9Z0H3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Smarcb1Q9Z0H3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcb1Q9Z0H3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcb1Q9Z0H3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcb1Q9Z0H3 Gm13036-201ENSMUST00000117799 748 ntBASIC16.54■□□□□ 0.24
Smarcb1Q9Z0H3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.54■□□□□ 0.24
Smarcb1Q9Z0H3 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.54■□□□□ 0.24
Smarcb1Q9Z0H3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.54■□□□□ 0.24
Smarcb1Q9Z0H3 Psmb5-202ENSMUST00000227257 622 ntBASIC16.54■□□□□ 0.24
Smarcb1Q9Z0H3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcb1Q9Z0H3 Gm15590-201ENSMUST00000078419 552 ntBASIC16.54■□□□□ 0.24
Smarcb1Q9Z0H3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcb1Q9Z0H3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcb1Q9Z0H3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smarcb1Q9Z0H3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Gm27646-201ENSMUST00000183989 110 ntBASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smarcb1Q9Z0H3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Gm19164-201ENSMUST00000210667 640 ntBASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Gm5364-201ENSMUST00000216789 889 ntBASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Smarcb1Q9Z0H3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.52■□□□□ 0.23
Smarcb1Q9Z0H3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Smarcb1Q9Z0H3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.52■□□□□ 0.23
Smarcb1Q9Z0H3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.52■□□□□ 0.23
Smarcb1Q9Z0H3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Smarcb1Q9Z0H3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Smarcb1Q9Z0H3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smarcb1Q9Z0H3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Smarcb1Q9Z0H3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
Smarcb1Q9Z0H3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Smarcb1Q9Z0H3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 Gm15358-201ENSMUST00000119249 520 ntBASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 Gm27525-201ENSMUST00000184465 107 ntBASIC16.51■□□□□ 0.23
Smarcb1Q9Z0H3 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms