Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh17Q9R100 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh17Q9R100 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cdh17Q9R100 Gm6433-201ENSMUST00000118634 875 ntBASIC15.62■□□□□ 0.09
Cdh17Q9R100 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.62■□□□□ 0.09
Cdh17Q9R100 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh17Q9R100 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Cdh17Q9R100 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.62■□□□□ 0.09
Cdh17Q9R100 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh17Q9R100 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cdh17Q9R100 Gm18032-201ENSMUST00000222541 538 ntBASIC15.62■□□□□ 0.09
Cdh17Q9R100 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh17Q9R100 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh17Q9R100 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cdh17Q9R100 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cdh17Q9R100 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Cdh17Q9R100 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh17Q9R100 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Cdh17Q9R100 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.62■□□□□ 0.09
Cdh17Q9R100 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.62■□□□□ 0.09
Cdh17Q9R100 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.62■□□□□ 0.09
Cdh17Q9R100 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh17Q9R100 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh17Q9R100 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh17Q9R100 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh17Q9R100 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdh17Q9R100 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdh17Q9R100 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdh17Q9R100 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdh17Q9R100 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdh17Q9R100 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdh17Q9R100 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdh17Q9R100 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.61■□□□□ 0.09
Cdh17Q9R100 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cdh17Q9R100 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.61■□□□□ 0.09
Cdh17Q9R100 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.61■□□□□ 0.09
Cdh17Q9R100 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdh17Q9R100 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.61■□□□□ 0.09
Cdh17Q9R100 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cdh17Q9R100 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.61■□□□□ 0.09
Cdh17Q9R100 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cdh17Q9R100 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Cdh17Q9R100 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.61■□□□□ 0.09
Cdh17Q9R100 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cdh17Q9R100 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cdh17Q9R100 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.59■□□□□ 0.09
Cdh17Q9R100 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
Cdh17Q9R100 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms