Protein–RNA interactions for Protein: Q9QZS8

Sh2d3c, SH2 domain-containing protein 3C, mousemouse

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d3cQ9QZS8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d3cQ9QZS8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh2d3cQ9QZS8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sh2d3cQ9QZS8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Gm6576-201ENSMUST00000169678 883 ntBASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sh2d3cQ9QZS8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Sh2d3cQ9QZS8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.64■□□□□ 0.09
Sh2d3cQ9QZS8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d3cQ9QZS8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d3cQ9QZS8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d3cQ9QZS8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Sh2d3cQ9QZS8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d3cQ9QZS8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d3cQ9QZS8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d3cQ9QZS8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d3cQ9QZS8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d3cQ9QZS8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Sh2d3cQ9QZS8 Gm715-201ENSMUST00000117865 831 ntBASIC15.64■□□□□ 0.09
Sh2d3cQ9QZS8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d3cQ9QZS8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sh2d3cQ9QZS8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.64■□□□□ 0.09
Sh2d3cQ9QZS8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms