Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Phtf1Q9QZ09 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.56■□□□□ 0.4
Phtf1Q9QZ09 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Phtf1Q9QZ09 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.56■□□□□ 0.4
Phtf1Q9QZ09 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Phtf1Q9QZ09 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Phtf1Q9QZ09 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Phtf1Q9QZ09 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Phtf1Q9QZ09 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Phtf1Q9QZ09 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Phtf1Q9QZ09 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Phtf1Q9QZ09 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Phtf1Q9QZ09 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Phtf1Q9QZ09 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Phtf1Q9QZ09 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phtf1Q9QZ09 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phtf1Q9QZ09 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Phtf1Q9QZ09 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Phtf1Q9QZ09 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phtf1Q9QZ09 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phtf1Q9QZ09 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Phtf1Q9QZ09 Gm43347-201ENSMUST00000200226 580 ntBASIC17.55■□□□□ 0.4
Phtf1Q9QZ09 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.55■□□□□ 0.4
Phtf1Q9QZ09 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.55■□□□□ 0.4
Phtf1Q9QZ09 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Phtf1Q9QZ09 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phtf1Q9QZ09 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Phtf1Q9QZ09 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phtf1Q9QZ09 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phtf1Q9QZ09 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phtf1Q9QZ09 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Phtf1Q9QZ09 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Phtf1Q9QZ09 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phtf1Q9QZ09 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Phtf1Q9QZ09 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Phtf1Q9QZ09 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phtf1Q9QZ09 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phtf1Q9QZ09 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Phtf1Q9QZ09 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Phtf1Q9QZ09 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phtf1Q9QZ09 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phtf1Q9QZ09 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phtf1Q9QZ09 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Phtf1Q9QZ09 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phtf1Q9QZ09 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phtf1Q9QZ09 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Phtf1Q9QZ09 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Phtf1Q9QZ09 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Gm44357-201ENSMUST00000195897 142 ntBASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Gm19658-201ENSMUST00000196231 138 ntBASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Gm44367-201ENSMUST00000196836 138 ntBASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Gm44350-201ENSMUST00000197197 138 ntBASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Gm44390-201ENSMUST00000197533 144 ntBASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Gm44313-201ENSMUST00000198018 138 ntBASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Gm44486-201ENSMUST00000198508 138 ntBASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Gm44314-201ENSMUST00000199263 138 ntBASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Gm44394-201ENSMUST00000199558 138 ntBASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Gm44484-201ENSMUST00000199873 138 ntBASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Gm44466-201ENSMUST00000200264 138 ntBASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Gm44359-201ENSMUST00000200671 138 ntBASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Phtf1Q9QZ09 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Phtf1Q9QZ09 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Phtf1Q9QZ09 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
Phtf1Q9QZ09 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Phtf1Q9QZ09 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Phtf1Q9QZ09 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Phtf1Q9QZ09 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Phtf1Q9QZ09 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Phtf1Q9QZ09 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Phtf1Q9QZ09 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.52■□□□□ 0.4
Phtf1Q9QZ09 Gm27741-201ENSMUST00000185060 237 ntBASIC17.52■□□□□ 0.4
Phtf1Q9QZ09 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Phtf1Q9QZ09 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Phtf1Q9QZ09 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Phtf1Q9QZ09 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.52■□□□□ 0.4
Phtf1Q9QZ09 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms