Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1aQ9QWF0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Chaf1aQ9QWF0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.95■□□□□ 0.46
Chaf1aQ9QWF0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1aQ9QWF0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1aQ9QWF0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Chaf1aQ9QWF0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1aQ9QWF0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1aQ9QWF0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.95■□□□□ 0.46
Chaf1aQ9QWF0 Gm13559-201ENSMUST00000120476 863 ntBASIC17.95■□□□□ 0.46
Chaf1aQ9QWF0 Mir6982-201ENSMUST00000184354 68 ntBASIC17.95■□□□□ 0.46
Chaf1aQ9QWF0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.95■□□□□ 0.46
Chaf1aQ9QWF0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.95■□□□□ 0.46
Chaf1aQ9QWF0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1aQ9QWF0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1aQ9QWF0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1aQ9QWF0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1aQ9QWF0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1aQ9QWF0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1aQ9QWF0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1aQ9QWF0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1aQ9QWF0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1aQ9QWF0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1aQ9QWF0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1aQ9QWF0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1aQ9QWF0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1aQ9QWF0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Chaf1aQ9QWF0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1aQ9QWF0 Gm16061-201ENSMUST00000122167 857 ntBASIC17.94■□□□□ 0.46
Chaf1aQ9QWF0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1aQ9QWF0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1aQ9QWF0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1aQ9QWF0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1aQ9QWF0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1aQ9QWF0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1aQ9QWF0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1aQ9QWF0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1aQ9QWF0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Gm7889-201ENSMUST00000185591 958 ntBASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Prob1-201ENSMUST00000097619 3021 ntBASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Chaf1aQ9QWF0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chaf1aQ9QWF0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chaf1aQ9QWF0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chaf1aQ9QWF0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chaf1aQ9QWF0 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.92■□□□□ 0.46
Chaf1aQ9QWF0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.92■□□□□ 0.46
Chaf1aQ9QWF0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Chaf1aQ9QWF0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.92■□□□□ 0.46
Chaf1aQ9QWF0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chaf1aQ9QWF0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Chaf1aQ9QWF0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.92■□□□□ 0.46
Chaf1aQ9QWF0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Chaf1aQ9QWF0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chaf1aQ9QWF0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chaf1aQ9QWF0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.92■□□□□ 0.46
Chaf1aQ9QWF0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.92■□□□□ 0.46
Chaf1aQ9QWF0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.92■□□□□ 0.46
Chaf1aQ9QWF0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chaf1aQ9QWF0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chaf1aQ9QWF0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chaf1aQ9QWF0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chaf1aQ9QWF0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Chaf1aQ9QWF0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chaf1aQ9QWF0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chaf1aQ9QWF0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chaf1aQ9QWF0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Chaf1aQ9QWF0 Gm11336-201ENSMUST00000118168 334 ntBASIC17.91■□□□□ 0.46
Chaf1aQ9QWF0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.91■□□□□ 0.46
Chaf1aQ9QWF0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chaf1aQ9QWF0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.91■□□□□ 0.46
Chaf1aQ9QWF0 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.91■□□□□ 0.46
Chaf1aQ9QWF0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chaf1aQ9QWF0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.91■□□□□ 0.46
Chaf1aQ9QWF0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chaf1aQ9QWF0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chaf1aQ9QWF0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms