Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.41■□□□□ 0.22
Msh5Q9QUM7 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC16.41■□□□□ 0.22
Msh5Q9QUM7 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Msh5Q9QUM7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.41■□□□□ 0.22
Msh5Q9QUM7 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Msh5Q9QUM7 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.41■□□□□ 0.22
Msh5Q9QUM7 AC114573.1-201ENSMUST00000224120 1210 ntBASIC16.41■□□□□ 0.22
Msh5Q9QUM7 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.41■□□□□ 0.22
Msh5Q9QUM7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Msh5Q9QUM7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
Msh5Q9QUM7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Msh5Q9QUM7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Msh5Q9QUM7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Msh5Q9QUM7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh5Q9QUM7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh5Q9QUM7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh5Q9QUM7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.4■□□□□ 0.22
Msh5Q9QUM7 Gm13836-201ENSMUST00000121159 501 ntBASIC16.4■□□□□ 0.22
Msh5Q9QUM7 Gm26039-201ENSMUST00000158152 144 ntBASIC16.4■□□□□ 0.22
Msh5Q9QUM7 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Msh5Q9QUM7 CT025561.1-201ENSMUST00000214972 674 ntBASIC16.4■□□□□ 0.22
Msh5Q9QUM7 Gm18115-201ENSMUST00000221209 621 ntBASIC16.4■□□□□ 0.22
Msh5Q9QUM7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh5Q9QUM7 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh5Q9QUM7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.4■□□□□ 0.22
Msh5Q9QUM7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh5Q9QUM7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh5Q9QUM7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh5Q9QUM7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh5Q9QUM7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh5Q9QUM7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh5Q9QUM7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Msh5Q9QUM7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
Msh5Q9QUM7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh5Q9QUM7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Msh5Q9QUM7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Gm14740-201ENSMUST00000118538 1150 ntBASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Gm27389-201ENSMUST00000183622 195 ntBASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Gm37002-201ENSMUST00000194560 373 ntBASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Gm18101-201ENSMUST00000215769 548 ntBASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Gm18032-201ENSMUST00000222541 538 ntBASIC16.39■□□□□ 0.21
Msh5Q9QUM7 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.39■□□□□ 0.21
Msh5Q9QUM7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Msh5Q9QUM7 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Gm21559-201ENSMUST00000220638 855 ntBASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Gm8587-201ENSMUST00000076538 843 ntBASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh5Q9QUM7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh5Q9QUM7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms