Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Gm37722-201ENSMUST00000193757 208 ntBASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a2Q9JLR1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.43□□□□□ -0.1
Sec61a2Q9JLR1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Gm11355-201ENSMUST00000121120 306 ntBASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a2Q9JLR1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sec61a2Q9JLR1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a2Q9JLR1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a2Q9JLR1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a2Q9JLR1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sec61a2Q9JLR1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms