Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx5Q9JL61 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx5Q9JL61 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Rfx5Q9JL61 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx5Q9JL61 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx5Q9JL61 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Rfx5Q9JL61 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Rfx5Q9JL61 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.9■□□□□ 0.3
Rfx5Q9JL61 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.9■□□□□ 0.3
Rfx5Q9JL61 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx5Q9JL61 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx5Q9JL61 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.9■□□□□ 0.3
Rfx5Q9JL61 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx5Q9JL61 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx5Q9JL61 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx5Q9JL61 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx5Q9JL61 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx5Q9JL61 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rfx5Q9JL61 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rfx5Q9JL61 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.89■□□□□ 0.3
Rfx5Q9JL61 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rfx5Q9JL61 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rfx5Q9JL61 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx5Q9JL61 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rfx5Q9JL61 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx5Q9JL61 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rfx5Q9JL61 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx5Q9JL61 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
Rfx5Q9JL61 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx5Q9JL61 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx5Q9JL61 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx5Q9JL61 Gm12497-201ENSMUST00000138778 237 ntBASIC16.89■□□□□ 0.29
Rfx5Q9JL61 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.89■□□□□ 0.29
Rfx5Q9JL61 Gm27741-201ENSMUST00000185060 237 ntBASIC16.89■□□□□ 0.29
Rfx5Q9JL61 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.89■□□□□ 0.29
Rfx5Q9JL61 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx5Q9JL61 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rfx5Q9JL61 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx5Q9JL61 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx5Q9JL61 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rfx5Q9JL61 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rfx5Q9JL61 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Gm8825-201ENSMUST00000182565 998 ntBASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Gm4518-201ENSMUST00000182638 718 ntBASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx5Q9JL61 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfx5Q9JL61 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Rfx5Q9JL61 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx5Q9JL61 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx5Q9JL61 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx5Q9JL61 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx5Q9JL61 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Rfx5Q9JL61 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Rfx5Q9JL61 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
Rfx5Q9JL61 Gm6257-201ENSMUST00000163864 910 ntBASIC16.87■□□□□ 0.29
Rfx5Q9JL61 Gm6296-201ENSMUST00000222599 943 ntBASIC16.87■□□□□ 0.29
Rfx5Q9JL61 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx5Q9JL61 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Rfx5Q9JL61 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx5Q9JL61 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx5Q9JL61 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx5Q9JL61 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Rfx5Q9JL61 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx5Q9JL61 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfx5Q9JL61 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx5Q9JL61 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx5Q9JL61 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx5Q9JL61 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx5Q9JL61 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx5Q9JL61 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx5Q9JL61 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Rfx5Q9JL61 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx5Q9JL61 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Rfx5Q9JL61 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx5Q9JL61 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfx5Q9JL61 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms